RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 MINK1Q8N4C8 1332 aaPredicted RBP10.5□□□□□ -0.73
AC003001.1-201ENST00000443247 RCCD1A6NED2 376 aa10.49□□□□□ -0.73
AC003001.1-201ENST00000443247 IRF6O14896 467 aa10.49□□□□□ -0.73
AC003001.1-201ENST00000443247 DNAJB2P25686 324 aa10.49□□□□□ -0.73
AC003001.1-201ENST00000443247 PPP4CP60510 307 aa10.49□□□□□ -0.73
AC003001.1-201ENST00000443247 KRI1Q8N9T8 703 aaKnown RBP10.49□□□□□ -0.73
AC003001.1-201ENST00000443247 CCDC102AQ96A19 550 aa10.49□□□□□ -0.73
AC003001.1-201ENST00000443247 SWT1Q5T5J6 900 aaKnown RBP10.47□□□□□ -0.73
AC003001.1-201ENST00000443247 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.46□□□□□ -0.73
AC003001.1-201ENST00000443247 RNF40O75150 1001 aa10.46□□□□□ -0.73
AC003001.1-201ENST00000443247 NLRP7Q8WX94 980 aa10.46□□□□□ -0.73
AC003001.1-201ENST00000443247 PHOX2BQ99453 314 aa10.46□□□□□ -0.73
AC003001.1-201ENST00000443247 TMEM134Q9H6X4 195 aa10.46□□□□□ -0.73
AC003001.1-201ENST00000443247 SLC4A3P48751 1232 aa10.44□□□□□ -0.74
AC003001.1-201ENST00000443247 SLF2Q8IX21 1173 aa10.44□□□□□ -0.74
AC003001.1-201ENST00000443247 IRX2Q9BZI1 471 aaPredicted RBP10.44□□□□□ -0.74
AC003001.1-201ENST00000443247 NECTIN2Q92692 538 aa10.43□□□□□ -0.74
AC003001.1-201ENST00000443247 KCNC4Q03721 635 aa10.4□□□□□ -0.74
AC003001.1-201ENST00000443247 SLC24A3Q9HC58 644 aa10.4□□□□□ -0.74
AC003001.1-201ENST00000443247 MDM2Q00987 491 aaPredicted RBP10.37□□□□□ -0.75
AC003001.1-201ENST00000443247 TPRNQ4KMQ1 711 aa10.37□□□□□ -0.75
AC003001.1-201ENST00000443247 AK7Q96M32 723 aa10.37□□□□□ -0.75
AC003001.1-201ENST00000443247 DAXXQ9UER7 740 aaPredicted RBP10.37□□□□□ -0.75
AC003001.1-201ENST00000443247 APLP1P51693 650 aa10.36□□□□□ -0.75
AC003001.1-201ENST00000443247 TRIM66O15016 1216 aa10.34□□□□□ -0.75
AC003001.1-201ENST00000443247 DDX11L8A8MPP1 907 aa10.33□□□□□ -0.76
AC003001.1-201ENST00000443247 AMHR2Q16671 573 aa10.33□□□□□ -0.76
AC003001.1-201ENST00000443247 PRR14Q9BWN1 585 aa10.33□□□□□ -0.76
AC003001.1-201ENST00000443247 SLC10A3P09131 477 aa10.32□□□□□ -0.76
AC003001.1-201ENST00000443247 CLCN1P35523 988 aa10.32□□□□□ -0.76
AC003001.1-201ENST00000443247 TTLL12Q14166 644 aaPredicted RBP10.32□□□□□ -0.76
AC003001.1-201ENST00000443247 RDH13Q8NBN7 331 aa10.32□□□□□ -0.76
AC003001.1-201ENST00000443247 GPCPD1Q9NPB8 672 aa10.32□□□□□ -0.76
AC003001.1-201ENST00000443247 CFHP08603 1231 aa10.31□□□□□ -0.76
AC003001.1-201ENST00000443247 TJAP1Q5JTD0 557 aa10.31□□□□□ -0.76
AC003001.1-201ENST00000443247 SULF1Q8IWU6 871 aa10.31□□□□□ -0.76
AC003001.1-201ENST00000443247 RSPH4AQ5TD94 716 aa10.3□□□□□ -0.76
AC003001.1-201ENST00000443247 MTRQ99707 1265 aa10.3□□□□□ -0.76
AC003001.1-201ENST00000443247 TMUB1Q9BVT8 246 aa10.29□□□□□ -0.76
AC003001.1-201ENST00000443247 REPIN1Q9BWE0 567 aaKnown RBP10.29□□□□□ -0.76
AC003001.1-201ENST00000443247 IL21Q9HBE4 155 aa10.29□□□□□ -0.76
AC003001.1-201ENST00000443247 KMT5BQ4FZB7 885 aa10.28□□□□□ -0.76
AC003001.1-201ENST00000443247 PARP9Q8IXQ6 854 aa10.28□□□□□ -0.76
AC003001.1-201ENST00000443247 PDE4DQ08499 809 aa10.27□□□□□ -0.77
AC003001.1-201ENST00000443247 FAM217BQ9NTX9 383 aaPredicted RBP10.27□□□□□ -0.77
AC003001.1-201ENST00000443247 GIGYF2Q6Y7W6 1299 aaKnown RBP10.26□□□□□ -0.77
AC003001.1-201ENST00000443247 PCDHB3Q9Y5E6 796 aa10.26□□□□□ -0.77
AC003001.1-201ENST00000443247 ACTN4O43707 911 aaKnown RBP10.25□□□□□ -0.77
AC003001.1-201ENST00000443247 CD46P15529 392 aa10.25□□□□□ -0.77
AC003001.1-201ENST00000443247 PRKCSHP14314 528 aaPredicted RBP10.24□□□□□ -0.77
AC003001.1-201ENST00000443247 COPS2P61201 443 aa10.24□□□□□ -0.77
AC003001.1-201ENST00000443247 ZNF516Q92618 1163 aa10.24□□□□□ -0.77
AC003001.1-201ENST00000443247 Q6ZNB5 142 aa10.23□□□□□ -0.77
AC003001.1-201ENST00000443247 SSTR3P32745 418 aaPredicted RBP10.22□□□□□ -0.77
AC003001.1-201ENST00000443247 GCGRP47871 477 aa10.22□□□□□ -0.77
AC003001.1-201ENST00000443247 BLOC1S3Q6QNY0 202 aa10.21□□□□□ -0.77
AC003001.1-201ENST00000443247 ZPR1O75312 459 aa10.2□□□□□ -0.78
AC003001.1-201ENST00000443247 MS4A1P11836 297 aa10.19□□□□□ -0.78
AC003001.1-201ENST00000443247 FUT2Q10981 343 aa10.19□□□□□ -0.78
AC003001.1-201ENST00000443247 LCE2BO14633 110 aa10.18□□□□□ -0.78
AC003001.1-201ENST00000443247 PUS10Q3MIT2 529 aaKnown RBP10.18□□□□□ -0.78
AC003001.1-201ENST00000443247 PPP1R18Q6NYC8 613 aa10.18□□□□□ -0.78
AC003001.1-201ENST00000443247 GPBP1L1Q9HC44 474 aaPredicted RBP10.18□□□□□ -0.78
AC003001.1-201ENST00000443247 NKX2-3Q8TAU0 364 aa10.17□□□□□ -0.78
AC003001.1-201ENST00000443247 KDM4AO75164 1064 aa10.16□□□□□ -0.78
AC003001.1-201ENST00000443247 NR1I2O75469 434 aa10.16□□□□□ -0.78
AC003001.1-201ENST00000443247 BEGAINQ9BUH8 593 aa10.16□□□□□ -0.78
AC003001.1-201ENST00000443247 PRKD2Q9BZL6 878 aa10.16□□□□□ -0.78
AC003001.1-201ENST00000443247 ATP6V1AP38606 617 aa10.14□□□□□ -0.79
AC003001.1-201ENST00000443247 LAPTM4AQ15012 233 aa10.14□□□□□ -0.79
AC003001.1-201ENST00000443247 NUTM1Q86Y26 1132 aa10.14□□□□□ -0.79
AC003001.1-201ENST00000443247 KDM4CQ9H3R0 1056 aa10.14□□□□□ -0.79
AC003001.1-201ENST00000443247 GFRA3O60609 400 aa10.13□□□□□ -0.79
AC003001.1-201ENST00000443247 MORN1Q5T089 497 aa10.13□□□□□ -0.79
AC003001.1-201ENST00000443247 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.13□□□□□ -0.79
AC003001.1-201ENST00000443247 GGCXP38435 758 aa10.12□□□□□ -0.79
AC003001.1-201ENST00000443247 USP46P62068 366 aa10.12□□□□□ -0.79
AC003001.1-201ENST00000443247 NEUROD2Q15784 382 aa10.12□□□□□ -0.79
AC003001.1-201ENST00000443247 GRIPAP1Q4V328 841 aa10.12□□□□□ -0.79
AC003001.1-201ENST00000443247 SCUBE3Q8IX30 993 aa10.12□□□□□ -0.79
AC003001.1-201ENST00000443247 HOXA2O43364 376 aa10.11□□□□□ -0.79
AC003001.1-201ENST00000443247 TLL1O43897 1013 aa10.11□□□□□ -0.79
AC003001.1-201ENST00000443247 HLA-CQ95604 372 aa10.11□□□□□ -0.79
AC003001.1-201ENST00000443247 V9GY48 417 aaPredicted RBP10.11□□□□□ -0.79
AC003001.1-201ENST00000443247 SPIRE2Q8WWL2 714 aa10.1□□□□□ -0.79
AC003001.1-201ENST00000443247 SLC27A5Q9Y2P5 690 aa10.1□□□□□ -0.79
AC003001.1-201ENST00000443247 ADH1BP00325 375 aa10.09□□□□□ -0.79
AC003001.1-201ENST00000443247 BRPF1P55201 1214 aaPredicted RBP10.09□□□□□ -0.79
AC003001.1-201ENST00000443247 GUCA2AQ02747 115 aa10.08□□□□□ -0.8
AC003001.1-201ENST00000443247 TBC1D2Q9BYX2 928 aa10.08□□□□□ -0.8
AC003001.1-201ENST00000443247 NRG2O14511 850 aaPredicted RBP10.07□□□□□ -0.8
AC003001.1-201ENST00000443247 TRAF7Q6Q0C0 670 aa10.07□□□□□ -0.8
AC003001.1-201ENST00000443247 FAM117AQ9C073 453 aa10.06□□□□□ -0.8
AC003001.1-201ENST00000443247 MOXD2PA6NHM9 499 aa10.05□□□□□ -0.8
AC003001.1-201ENST00000443247 NDUFV2P19404 249 aa10.05□□□□□ -0.8
AC003001.1-201ENST00000443247 DIXDC1Q155Q3 683 aa10.05□□□□□ -0.8
AC003001.1-201ENST00000443247 SPSB2Q99619 263 aa10.05□□□□□ -0.8
AC003001.1-201ENST00000443247 RNF19BQ6ZMZ0 732 aa10.04□□□□□ -0.8
AC003001.1-201ENST00000443247 THAP11Q96EK4 314 aa10.04□□□□□ -0.8
AC003001.1-201ENST00000443247 DDRGK1Q96HY6 314 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms