RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 SLC26A8Q96RN1 970 aa13.2□□□□□ -0.3
USP6NL-203ENST00000443016 ADGRB3O60242 1522 aa13.2□□□□□ -0.3
USP6NL-203ENST00000443016 KDM5AP29375 1690 aaKnown RBP13.18□□□□□ -0.3
USP6NL-203ENST00000443016 GCC2Q8IWJ2 1684 aa13.18□□□□□ -0.3
USP6NL-203ENST00000443016 DISP3Q9P2K9 1392 aa13.17□□□□□ -0.3
USP6NL-203ENST00000443016 IQGAP3Q86VI3 1631 aa13.17□□□□□ -0.3
USP6NL-203ENST00000443016 LRRC7Q96NW7 1537 aa13.17□□□□□ -0.3
USP6NL-203ENST00000443016 NUTM2DQ5VT03 806 aaPredicted RBP13.16□□□□□ -0.3
USP6NL-203ENST00000443016 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.16□□□□□ -0.3
USP6NL-203ENST00000443016 TRIM52Q96A61 297 aa13.16□□□□□ -0.3
USP6NL-203ENST00000443016 E9PCH4 1651 aa13.16□□□□□ -0.3
USP6NL-203ENST00000443016 RIMS2Q9UQ26 1411 aa13.15□□□□□ -0.3
USP6NL-203ENST00000443016 KCNA6P17658 529 aa13.14□□□□□ -0.31
USP6NL-203ENST00000443016 HSPA1LP34931 641 aa13.14□□□□□ -0.31
USP6NL-203ENST00000443016 NAIPQ13075 1403 aa13.14□□□□□ -0.31
USP6NL-203ENST00000443016 STRCP1A6NGW2 1772 aa13.14□□□□□ -0.31
USP6NL-203ENST00000443016 ADRA2BP18089 450 aa13.14□□□□□ -0.31
USP6NL-203ENST00000443016 PROSER2Q86WR7 435 aaPredicted RBP13.13□□□□□ -0.31
USP6NL-203ENST00000443016 ZNF326Q5BKZ1 582 aaKnown RBP13.13□□□□□ -0.31
USP6NL-203ENST00000443016 ZFYVE9O95405 1425 aa13.12□□□□□ -0.31
USP6NL-203ENST00000443016 PLEKHG1Q9ULL1 1385 aa13.12□□□□□ -0.31
USP6NL-203ENST00000443016 TIMELESSQ9UNS1 1208 aa13.12□□□□□ -0.31
USP6NL-203ENST00000443016 TMEM131LA2VDJ0 1609 aa13.12□□□□□ -0.31
USP6NL-203ENST00000443016 RBM33Q96EV2 1170 aaKnown RBP13.12□□□□□ -0.31
USP6NL-203ENST00000443016 TMEM94Q12767 1356 aa13.11□□□□□ -0.31
USP6NL-203ENST00000443016 HFM1A2PYH4 1435 aa13.1□□□□□ -0.31
USP6NL-203ENST00000443016 MYO5BQ9ULV0 1848 aa13.1□□□□□ -0.31
USP6NL-203ENST00000443016 TBX22Q9Y458 520 aa13.08□□□□□ -0.31
USP6NL-203ENST00000443016 C14orf37Q86TY3 774 aa13.07□□□□□ -0.32
USP6NL-203ENST00000443016 NKTRP30414 1462 aaKnown RBP13.06□□□□□ -0.32
USP6NL-203ENST00000443016 SPHKAPQ2M3C7 1700 aa13.06□□□□□ -0.32
USP6NL-203ENST00000443016 ALKQ9UM73 1620 aa13.06□□□□□ -0.32
USP6NL-203ENST00000443016 MSH6P52701 1360 aa13.06□□□□□ -0.32
USP6NL-203ENST00000443016 ADAMTS13Q76LX8 1427 aa13.04□□□□□ -0.32
USP6NL-203ENST00000443016 TRPM2O94759 1503 aa13.02□□□□□ -0.32
USP6NL-203ENST00000443016 NWD1Q149M9 1564 aa13.02□□□□□ -0.32
USP6NL-203ENST00000443016 ILDR2Q71H61 639 aa13.02□□□□□ -0.32
USP6NL-203ENST00000443016 AMOTL2Q9Y2J4 779 aa13.02□□□□□ -0.32
USP6NL-203ENST00000443016 XIRP1Q702N8 1843 aaKnown RBP13.02□□□□□ -0.32
USP6NL-203ENST00000443016 FOXD1Q16676 465 aa13.02□□□□□ -0.33
USP6NL-203ENST00000443016 PIK3R4Q99570 1358 aa13.02□□□□□ -0.33
USP6NL-203ENST00000443016 SLAIN2Q9P270 581 aa13.01□□□□□ -0.33
USP6NL-203ENST00000443016 DIP2AQ14689 1571 aa13.01□□□□□ -0.33
USP6NL-203ENST00000443016 CLTCL1P53675 1640 aa13.01□□□□□ -0.33
USP6NL-203ENST00000443016 FAM135BQ49AJ0 1406 aa13□□□□□ -0.33
USP6NL-203ENST00000443016 CHD2O14647 1828 aaKnown RBP13□□□□□ -0.33
USP6NL-203ENST00000443016 TAOK2Q9UL54 1235 aa13□□□□□ -0.33
USP6NL-203ENST00000443016 ZBTB22O15209 634 aa12.99□□□□□ -0.33
USP6NL-203ENST00000443016 VGFO15240 615 aaPredicted RBP12.99□□□□□ -0.33
USP6NL-203ENST00000443016 ATF3P18847 181 aa12.99□□□□□ -0.33
USP6NL-203ENST00000443016 MPHOSPH9Q99550 1183 aa12.99□□□□□ -0.33
USP6NL-203ENST00000443016 C19orf44Q9H6X5 657 aa12.98□□□□□ -0.33
USP6NL-203ENST00000443016 CADPS2Q86UW7 1296 aa12.98□□□□□ -0.33
USP6NL-203ENST00000443016 KIF1BO60333 1816 aa12.97□□□□□ -0.33
USP6NL-203ENST00000443016 NCOA3Q9Y6Q9 1424 aa12.97□□□□□ -0.33
USP6NL-203ENST00000443016 CCDC144AA2RUR9 1427 aa12.97□□□□□ -0.33
USP6NL-203ENST00000443016 ACIN1Q9UKV3 1341 aaKnown RBP12.96□□□□□ -0.33
USP6NL-203ENST00000443016 RGL3Q3MIN7 710 aa12.96□□□□□ -0.33
USP6NL-203ENST00000443016 METP08581 1390 aa12.96□□□□□ -0.33
USP6NL-203ENST00000443016 RPGRIP1LQ68CZ1 1315 aa12.96□□□□□ -0.34
USP6NL-203ENST00000443016 MED1Q15648 1581 aaPredicted RBP12.96□□□□□ -0.34
USP6NL-203ENST00000443016 SETBP1Q9Y6X0 1596 aa12.96□□□□□ -0.34
USP6NL-203ENST00000443016 PTPRUQ92729 1446 aa12.96□□□□□ -0.34
USP6NL-203ENST00000443016 NEXMIFQ5QGS0 1516 aa12.96□□□□□ -0.34
USP6NL-203ENST00000443016 SETD5Q9C0A6 1442 aa12.95□□□□□ -0.34
USP6NL-203ENST00000443016 ROBO1Q9Y6N7 1651 aa12.95□□□□□ -0.34
USP6NL-203ENST00000443016 SOCS7O14512 581 aa12.94□□□□□ -0.34
USP6NL-203ENST00000443016 NRXN3Q9Y4C0 1643 aa12.93□□□□□ -0.34
USP6NL-203ENST00000443016 RAB3GAP2Q9H2M9 1393 aa12.91□□□□□ -0.34
USP6NL-203ENST00000443016 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.9□□□□□ -0.34
USP6NL-203ENST00000443016 TULP1O00294 542 aaPredicted RBP12.89□□□□□ -0.35
USP6NL-203ENST00000443016 XRN1Q8IZH2 1706 aaKnown RBP12.89□□□□□ -0.35
USP6NL-203ENST00000443016 ADGRF5Q8IZF2 1346 aa12.88□□□□□ -0.35
USP6NL-203ENST00000443016 DCCP43146 1447 aa12.88□□□□□ -0.35
USP6NL-203ENST00000443016 BRINP3Q76B58 766 aa12.87□□□□□ -0.35
USP6NL-203ENST00000443016 ARXQ96QS3 562 aa12.87□□□□□ -0.35
USP6NL-203ENST00000443016 ANKRD30BQ9BXX2 1392 aa12.87□□□□□ -0.35
USP6NL-203ENST00000443016 JCADQ9P266 1359 aa12.87□□□□□ -0.35
USP6NL-203ENST00000443016 PHLPP1O60346 1717 aa12.87□□□□□ -0.35
USP6NL-203ENST00000443016 ADGRL3Q9HAR2 1447 aa12.86□□□□□ -0.35
USP6NL-203ENST00000443016 SPATA31E1Q6ZUB1 1445 aa12.86□□□□□ -0.35
USP6NL-203ENST00000443016 STK26Q9P289 416 aa12.86□□□□□ -0.35
USP6NL-203ENST00000443016 ROBO2Q9HCK4 1378 aa12.85□□□□□ -0.35
USP6NL-203ENST00000443016 PPLO60437 1756 aa12.85□□□□□ -0.35
USP6NL-203ENST00000443016 PTCH1Q13635 1447 aa12.85□□□□□ -0.35
USP6NL-203ENST00000443016 TRIM26Q12899 539 aaPredicted RBP12.84□□□□□ -0.35
USP6NL-203ENST00000443016 MST1RQ04912 1400 aa12.84□□□□□ -0.35
USP6NL-203ENST00000443016 MEX3CQ5U5Q3 659 aaKnown RBP12.83□□□□□ -0.36
USP6NL-203ENST00000443016 TMEM132EQ6IEE7 984 aa12.83□□□□□ -0.36
USP6NL-203ENST00000443016 RGS17Q9UGC6 210 aaPredicted RBP12.82□□□□□ -0.36
USP6NL-203ENST00000443016 SPATA31A6Q5VVP1 1343 aa12.81□□□□□ -0.36
USP6NL-203ENST00000443016 COL16A1Q07092 1604 aaPredicted RBP12.81□□□□□ -0.36
USP6NL-203ENST00000443016 TPRNQ4KMQ1 711 aa12.81□□□□□ -0.36
USP6NL-203ENST00000443016 ASXL1Q8IXJ9 1541 aa12.81□□□□□ -0.36
USP6NL-203ENST00000443016 SETD1AO15047 1707 aaKnown RBP12.81□□□□□ -0.36
USP6NL-203ENST00000443016 AHDC1Q5TGY3 1603 aaPredicted RBP12.8□□□□□ -0.36
USP6NL-203ENST00000443016 NUTM2BA6NNL0 878 aaPredicted RBP12.8□□□□□ -0.36
USP6NL-203ENST00000443016 NUTM2EB1AL46 878 aaPredicted RBP12.8□□□□□ -0.36
USP6NL-203ENST00000443016 HRCP23327 699 aa12.8□□□□□ -0.36
USP6NL-203ENST00000443016 NUTM2AQ8IVF1 878 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms