RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 PLEKHG1Q9ULL1 1385 aa33.25■■■□□ 2.91
HDLBP-220ENST00000442730 CLTCL1P53675 1640 aa33.24■■■□□ 2.91
HDLBP-220ENST00000442730 PPP1R15AO75807 674 aaPredicted RBP33.21■■■□□ 2.91
HDLBP-220ENST00000442730 SLC26A8Q96RN1 970 aa33.21■■■□□ 2.91
HDLBP-220ENST00000442730 HDGFP51858 240 aaKnown RBP33.19■■■□□ 2.9
HDLBP-220ENST00000442730 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.18■■■□□ 2.9
HDLBP-220ENST00000442730 SLC4A1APQ9BWU0 796 aaKnown RBP33.18■■■□□ 2.9
HDLBP-220ENST00000442730 NWD1Q149M9 1564 aa33.17■■■□□ 2.9
HDLBP-220ENST00000442730 ALKQ9UM73 1620 aa33.16■■■□□ 2.9
HDLBP-220ENST00000442730 BCANQ96GW7 911 aa33.14■■■□□ 2.9
HDLBP-220ENST00000442730 SENP3Q9H4L4 574 aaPredicted RBP33.14■■■□□ 2.9
HDLBP-220ENST00000442730 NUTM2DQ5VT03 806 aaPredicted RBP33.13■■■□□ 2.89
HDLBP-220ENST00000442730 KCNA6P17658 529 aa33.12■■■□□ 2.89
HDLBP-220ENST00000442730 ADAMTS13Q76LX8 1427 aa33.11■■■□□ 2.89
HDLBP-220ENST00000442730 DIP2AQ14689 1571 aa33.11■■■□□ 2.89
HDLBP-220ENST00000442730 XIRP1Q702N8 1843 aaKnown RBP33.11■■■□□ 2.89
HDLBP-220ENST00000442730 NKTRP30414 1462 aaKnown RBP33.11■■■□□ 2.89
HDLBP-220ENST00000442730 SETD5Q9C0A6 1442 aa33.11■■■□□ 2.89
HDLBP-220ENST00000442730 TOM1O60784 492 aa33.09■■■□□ 2.89
HDLBP-220ENST00000442730 NEXMIFQ5QGS0 1516 aa33.07■■■□□ 2.88
HDLBP-220ENST00000442730 KIF1BO60333 1816 aa33.07■■■□□ 2.88
HDLBP-220ENST00000442730 TBX22Q9Y458 520 aa33.05■■■□□ 2.88
HDLBP-220ENST00000442730 NRXN3Q9Y4C0 1643 aa33.04■■■□□ 2.88
HDLBP-220ENST00000442730 ZNF326Q5BKZ1 582 aaKnown RBP33.04■■■□□ 2.88
HDLBP-220ENST00000442730 TMEM94Q12767 1356 aa33.04■■■□□ 2.88
HDLBP-220ENST00000442730 SETBP1Q9Y6X0 1596 aa33.04■■■□□ 2.88
HDLBP-220ENST00000442730 CHD2O14647 1828 aaKnown RBP33.03■■■□□ 2.88
HDLBP-220ENST00000442730 PIP4K2BP78356 416 aa33.03■■■□□ 2.88
HDLBP-220ENST00000442730 FOXD1Q16676 465 aa33.03■■■□□ 2.88
HDLBP-220ENST00000442730 MPHOSPH9Q99550 1183 aa33.01■■■□□ 2.87
HDLBP-220ENST00000442730 SCAF1Q9H7N4 1312 aaKnown RBP33.01■■■□□ 2.87
HDLBP-220ENST00000442730 RAB3GAP2Q9H2M9 1393 aa33■■■□□ 2.87
HDLBP-220ENST00000442730 ACIN1Q9UKV3 1341 aaKnown RBP32.99■■■□□ 2.87
HDLBP-220ENST00000442730 PIK3R4Q99570 1358 aa32.98■■■□□ 2.87
HDLBP-220ENST00000442730 PROSER2Q86WR7 435 aaPredicted RBP32.96■■■□□ 2.87
HDLBP-220ENST00000442730 CCDC144AA2RUR9 1427 aa32.94■■■□□ 2.86
HDLBP-220ENST00000442730 RBM33Q96EV2 1170 aaKnown RBP32.93■■■□□ 2.86
HDLBP-220ENST00000442730 PTPRUQ92729 1446 aa32.9■■■□□ 2.86
HDLBP-220ENST00000442730 HSPA1LP34931 641 aa32.89■■■□□ 2.86
HDLBP-220ENST00000442730 XRN1Q8IZH2 1706 aaKnown RBP32.88■■■□□ 2.85
HDLBP-220ENST00000442730 PPLO60437 1756 aa32.87■■■□□ 2.85
HDLBP-220ENST00000442730 SPATA31E1Q6ZUB1 1445 aa32.86■■■□□ 2.85
HDLBP-220ENST00000442730 RPGRIP1LQ68CZ1 1315 aa32.86■■■□□ 2.85
HDLBP-220ENST00000442730 METP08581 1390 aa32.84■■■□□ 2.85
HDLBP-220ENST00000442730 MSH6P52701 1360 aa32.83■■■□□ 2.85
HDLBP-220ENST00000442730 NCOA3Q9Y6Q9 1424 aa32.83■■■□□ 2.85
HDLBP-220ENST00000442730 VGFO15240 615 aaPredicted RBP32.81■■■□□ 2.84
HDLBP-220ENST00000442730 AMOTL2Q9Y2J4 779 aa32.81■■■□□ 2.84
HDLBP-220ENST00000442730 SETD1AO15047 1707 aaKnown RBP32.8■■■□□ 2.84
HDLBP-220ENST00000442730 IFT172Q9UG01 1749 aa32.77■■■□□ 2.84
HDLBP-220ENST00000442730 FAM135BQ49AJ0 1406 aa32.77■■■□□ 2.84
HDLBP-220ENST00000442730 HRCP23327 699 aa32.74■■■□□ 2.83
HDLBP-220ENST00000442730 ROBO1Q9Y6N7 1651 aa32.73■■■□□ 2.83
HDLBP-220ENST00000442730 RGL3Q3MIN7 710 aa32.71■■■□□ 2.83
HDLBP-220ENST00000442730 C14orf37Q86TY3 774 aa32.71■■■□□ 2.83
HDLBP-220ENST00000442730 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.71■■■□□ 2.83
HDLBP-220ENST00000442730 ANKRD30BQ9BXX2 1392 aa32.7■■■□□ 2.83
HDLBP-220ENST00000442730 DISP3Q9P2K9 1392 aa32.7■■■□□ 2.82
HDLBP-220ENST00000442730 ADGRF5Q8IZF2 1346 aa32.67■■■□□ 2.82
HDLBP-220ENST00000442730 PTCH1Q13635 1447 aa32.67■■■□□ 2.82
HDLBP-220ENST00000442730 PRAG1Q86YV5 1406 aa32.67■■■□□ 2.82
HDLBP-220ENST00000442730 C19orf44Q9H6X5 657 aa32.66■■■□□ 2.82
HDLBP-220ENST00000442730 SLAIN2Q9P270 581 aa32.66■■■□□ 2.82
HDLBP-220ENST00000442730 DCCP43146 1447 aa32.64■■■□□ 2.82
HDLBP-220ENST00000442730 PIK3C2GO75747 1445 aa32.63■■■□□ 2.81
HDLBP-220ENST00000442730 MED1Q15648 1581 aaPredicted RBP32.62■■■□□ 2.81
HDLBP-220ENST00000442730 CADPS2Q86UW7 1296 aa32.61■■■□□ 2.81
HDLBP-220ENST00000442730 ADGRL3Q9HAR2 1447 aa32.6■■■□□ 2.81
HDLBP-220ENST00000442730 ATF3P18847 181 aa32.6■■■□□ 2.81
HDLBP-220ENST00000442730 NALCNQ8IZF0 1738 aa32.6■■■□□ 2.81
HDLBP-220ENST00000442730 ROBO2Q9HCK4 1378 aa32.59■■■□□ 2.81
HDLBP-220ENST00000442730 MYOM2P54296 1465 aa32.59■■■□□ 2.81
HDLBP-220ENST00000442730 NRXN1Q9ULB1 1477 aa32.58■■■□□ 2.81
HDLBP-220ENST00000442730 ASXL1Q8IXJ9 1541 aa32.57■■■□□ 2.8
HDLBP-220ENST00000442730 MST1RQ04912 1400 aa32.51■■■□□ 2.8
HDLBP-220ENST00000442730 PHLPP1O60346 1717 aa32.51■■■□□ 2.79
HDLBP-220ENST00000442730 TECPR2O15040 1411 aa32.5■■■□□ 2.79
HDLBP-220ENST00000442730 LAMC1P11047 1609 aa32.48■■■□□ 2.79
HDLBP-220ENST00000442730 COL16A1Q07092 1604 aaPredicted RBP32.48■■■□□ 2.79
HDLBP-220ENST00000442730 AHDC1Q5TGY3 1603 aaPredicted RBP32.48■■■□□ 2.79
HDLBP-220ENST00000442730 LRPPRCP42704 1394 aaKnown RBP32.47■■■□□ 2.79
HDLBP-220ENST00000442730 KNDC1Q76NI1 1749 aa32.46■■■□□ 2.79
HDLBP-220ENST00000442730 BRINP3Q76B58 766 aa32.43■■■□□ 2.78
HDLBP-220ENST00000442730 TMEM132EQ6IEE7 984 aa32.42■■■□□ 2.78
HDLBP-220ENST00000442730 C14orf93Q9H972 538 aaKnown RBP32.42■■■□□ 2.78
HDLBP-220ENST00000442730 ABCC11Q96J66 1382 aa32.42■■■□□ 2.78
HDLBP-220ENST00000442730 YTHDC2Q9H6S0 1430 aaKnown RBP32.42■■■□□ 2.78
HDLBP-220ENST00000442730 ILDR2Q71H61 639 aa32.41■■■□□ 2.78
HDLBP-220ENST00000442730 STK26Q9P289 416 aa32.4■■■□□ 2.78
HDLBP-220ENST00000442730 CDC42BPGQ6DT37 1551 aa32.39■■■□□ 2.78
HDLBP-220ENST00000442730 CFAP70Q5T0N1 1121 aa32.37■■■□□ 2.77
HDLBP-220ENST00000442730 C1orf167Q5SNV9 1468 aa32.36■■■□□ 2.77
HDLBP-220ENST00000442730 DHX57Q6P158 1386 aaKnown RBP32.36■■■□□ 2.77
HDLBP-220ENST00000442730 NHSL1Q5SYE7 1610 aa32.36■■■□□ 2.77
HDLBP-220ENST00000442730 JCADQ9P266 1359 aa32.35■■■□□ 2.77
HDLBP-220ENST00000442730 PLEKHH1Q9ULM0 1364 aa32.34■■■□□ 2.77
HDLBP-220ENST00000442730 ADGRB1O14514 1584 aa32.33■■■□□ 2.77
HDLBP-220ENST00000442730 DCAF11Q8TEB1 546 aa32.33■■■□□ 2.77
HDLBP-220ENST00000442730 WAPLQ7Z5K2 1190 aa32.32■■■□□ 2.76
HDLBP-220ENST00000442730 KDM2AQ9Y2K7 1162 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms