RNA–Protein interactions for RNA: ENST00000442447.5

RBM39-215, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-215ENST00000442447 PPP1R15AO75807 674 aaPredicted RBP24.29■■□□□ 1.48
RBM39-215ENST00000442447 BCANQ96GW7 911 aa24.29■■□□□ 1.48
RBM39-215ENST00000442447 LRRC7Q96NW7 1537 aa24.29■■□□□ 1.48
RBM39-215ENST00000442447 HDGFP51858 240 aaKnown RBP24.28■■□□□ 1.48
RBM39-215ENST00000442447 PLEKHG1Q9ULL1 1385 aa24.28■■□□□ 1.48
RBM39-215ENST00000442447 SLC4A1APQ9BWU0 796 aaKnown RBP24.27■■□□□ 1.48
RBM39-215ENST00000442447 TRPM2O94759 1503 aa24.26■■□□□ 1.47
RBM39-215ENST00000442447 NUTM2DQ5VT03 806 aaPredicted RBP24.26■■□□□ 1.47
RBM39-215ENST00000442447 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.25■■□□□ 1.47
RBM39-215ENST00000442447 CLTCL1P53675 1640 aa24.24■■□□□ 1.47
RBM39-215ENST00000442447 TOM1O60784 492 aa24.21■■□□□ 1.47
RBM39-215ENST00000442447 KCNA6P17658 529 aa24.2■■□□□ 1.46
RBM39-215ENST00000442447 SCAF1Q9H7N4 1312 aaKnown RBP24.19■■□□□ 1.46
RBM39-215ENST00000442447 ZNF326Q5BKZ1 582 aaKnown RBP24.19■■□□□ 1.46
RBM39-215ENST00000442447 PIP4K2BP78356 416 aa24.18■■□□□ 1.46
RBM39-215ENST00000442447 SETD5Q9C0A6 1442 aa24.18■■□□□ 1.46
RBM39-215ENST00000442447 NWD1Q149M9 1564 aa24.17■■□□□ 1.46
RBM39-215ENST00000442447 FOXD1Q16676 465 aa24.17■■□□□ 1.46
RBM39-215ENST00000442447 ALKQ9UM73 1620 aa24.17■■□□□ 1.46
RBM39-215ENST00000442447 ADAMTS13Q76LX8 1427 aa24.16■■□□□ 1.46
RBM39-215ENST00000442447 TBX22Q9Y458 520 aa24.15■■□□□ 1.46
RBM39-215ENST00000442447 XIRP1Q702N8 1843 aaKnown RBP24.14■■□□□ 1.46
RBM39-215ENST00000442447 MPHOSPH9Q99550 1183 aa24.14■■□□□ 1.45
RBM39-215ENST00000442447 KIF1BO60333 1816 aa24.14■■□□□ 1.45
RBM39-215ENST00000442447 TMEM94Q12767 1356 aa24.14■■□□□ 1.45
RBM39-215ENST00000442447 NKTRP30414 1462 aaKnown RBP24.13■■□□□ 1.45
RBM39-215ENST00000442447 DIP2AQ14689 1571 aa24.13■■□□□ 1.45
RBM39-215ENST00000442447 PROSER2Q86WR7 435 aaPredicted RBP24.12■■□□□ 1.45
RBM39-215ENST00000442447 NEXMIFQ5QGS0 1516 aa24.11■■□□□ 1.45
RBM39-215ENST00000442447 RBM33Q96EV2 1170 aaKnown RBP24.11■■□□□ 1.45
RBM39-215ENST00000442447 RAB3GAP2Q9H2M9 1393 aa24.11■■□□□ 1.45
RBM39-215ENST00000442447 CHD2O14647 1828 aaKnown RBP24.1■■□□□ 1.45
RBM39-215ENST00000442447 SETBP1Q9Y6X0 1596 aa24.08■■□□□ 1.45
RBM39-215ENST00000442447 NRXN3Q9Y4C0 1643 aa24.08■■□□□ 1.45
RBM39-215ENST00000442447 ACIN1Q9UKV3 1341 aaKnown RBP24.08■■□□□ 1.44
RBM39-215ENST00000442447 PIK3R4Q99570 1358 aa24.06■■□□□ 1.44
RBM39-215ENST00000442447 CCDC144AA2RUR9 1427 aa24.05■■□□□ 1.44
RBM39-215ENST00000442447 HSPA1LP34931 641 aa24.05■■□□□ 1.44
RBM39-215ENST00000442447 PTPRUQ92729 1446 aa24.02■■□□□ 1.44
RBM39-215ENST00000442447 AMOTL2Q9Y2J4 779 aa24■■□□□ 1.43
RBM39-215ENST00000442447 RPGRIP1LQ68CZ1 1315 aa24■■□□□ 1.43
RBM39-215ENST00000442447 MSH6P52701 1360 aa24■■□□□ 1.43
RBM39-215ENST00000442447 VGFO15240 615 aaPredicted RBP23.99■■□□□ 1.43
RBM39-215ENST00000442447 METP08581 1390 aa23.99■■□□□ 1.43
RBM39-215ENST00000442447 PPLO60437 1756 aa23.97■■□□□ 1.43
RBM39-215ENST00000442447 SPATA31E1Q6ZUB1 1445 aa23.96■■□□□ 1.43
RBM39-215ENST00000442447 RGL3Q3MIN7 710 aa23.96■■□□□ 1.43
RBM39-215ENST00000442447 XRN1Q8IZH2 1706 aaKnown RBP23.96■■□□□ 1.43
RBM39-215ENST00000442447 NCOA3Q9Y6Q9 1424 aa23.95■■□□□ 1.42
RBM39-215ENST00000442447 C14orf37Q86TY3 774 aa23.95■■□□□ 1.42
RBM39-215ENST00000442447 DISP3Q9P2K9 1392 aa23.92■■□□□ 1.42
RBM39-215ENST00000442447 FAM135BQ49AJ0 1406 aa23.92■■□□□ 1.42
RBM39-215ENST00000442447 SETD1AO15047 1707 aaKnown RBP23.9■■□□□ 1.42
RBM39-215ENST00000442447 HRCP23327 699 aa23.9■■□□□ 1.42
RBM39-215ENST00000442447 ROBO1Q9Y6N7 1651 aa23.89■■□□□ 1.41
RBM39-215ENST00000442447 ADGRF5Q8IZF2 1346 aa23.88■■□□□ 1.41
RBM39-215ENST00000442447 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.87■■□□□ 1.41
RBM39-215ENST00000442447 IFT172Q9UG01 1749 aa23.87■■□□□ 1.41
RBM39-215ENST00000442447 C19orf44Q9H6X5 657 aa23.87■■□□□ 1.41
RBM39-215ENST00000442447 SLAIN2Q9P270 581 aa23.87■■□□□ 1.41
RBM39-215ENST00000442447 ANKRD30BQ9BXX2 1392 aa23.87■■□□□ 1.41
RBM39-215ENST00000442447 ATF3P18847 181 aa23.84■■□□□ 1.41
RBM39-215ENST00000442447 CADPS2Q86UW7 1296 aa23.84■■□□□ 1.41
RBM39-215ENST00000442447 PTCH1Q13635 1447 aa23.81■■□□□ 1.4
RBM39-215ENST00000442447 MED1Q15648 1581 aaPredicted RBP23.81■■□□□ 1.4
RBM39-215ENST00000442447 PIK3C2GO75747 1445 aa23.8■■□□□ 1.4
RBM39-215ENST00000442447 DCCP43146 1447 aa23.8■■□□□ 1.4
RBM39-215ENST00000442447 ROBO2Q9HCK4 1378 aa23.79■■□□□ 1.4
RBM39-215ENST00000442447 ADGRL3Q9HAR2 1447 aa23.79■■□□□ 1.4
RBM39-215ENST00000442447 PRAG1Q86YV5 1406 aa23.78■■□□□ 1.4
RBM39-215ENST00000442447 NALCNQ8IZF0 1738 aa23.77■■□□□ 1.4
RBM39-215ENST00000442447 MYOM2P54296 1465 aa23.75■■□□□ 1.39
RBM39-215ENST00000442447 ASXL1Q8IXJ9 1541 aa23.74■■□□□ 1.39
RBM39-215ENST00000442447 NRXN1Q9ULB1 1477 aa23.74■■□□□ 1.39
RBM39-215ENST00000442447 PHLPP1O60346 1717 aa23.73■■□□□ 1.39
RBM39-215ENST00000442447 TMEM132EQ6IEE7 984 aa23.73■■□□□ 1.39
RBM39-215ENST00000442447 MST1RQ04912 1400 aa23.73■■□□□ 1.39
RBM39-215ENST00000442447 STK26Q9P289 416 aa23.72■■□□□ 1.39
RBM39-215ENST00000442447 LRPPRCP42704 1394 aaKnown RBP23.71■■□□□ 1.39
RBM39-215ENST00000442447 ILDR2Q71H61 639 aa23.71■■□□□ 1.39
RBM39-215ENST00000442447 BRINP3Q76B58 766 aa23.71■■□□□ 1.39
RBM39-215ENST00000442447 C14orf93Q9H972 538 aaKnown RBP23.69■■□□□ 1.38
RBM39-215ENST00000442447 TECPR2O15040 1411 aa23.68■■□□□ 1.38
RBM39-215ENST00000442447 CFAP70Q5T0N1 1121 aa23.68■■□□□ 1.38
RBM39-215ENST00000442447 COL16A1Q07092 1604 aaPredicted RBP23.68■■□□□ 1.38
RBM39-215ENST00000442447 AHDC1Q5TGY3 1603 aaPredicted RBP23.68■■□□□ 1.38
RBM39-215ENST00000442447 YTHDC2Q9H6S0 1430 aaKnown RBP23.67■■□□□ 1.38
RBM39-215ENST00000442447 LAMC1P11047 1609 aa23.66■■□□□ 1.38
RBM39-215ENST00000442447 ABCC11Q96J66 1382 aa23.66■■□□□ 1.38
RBM39-215ENST00000442447 KNDC1Q76NI1 1749 aa23.66■■□□□ 1.38
RBM39-215ENST00000442447 DCAF11Q8TEB1 546 aa23.65■■□□□ 1.38
RBM39-215ENST00000442447 KDM2AQ9Y2K7 1162 aa23.65■■□□□ 1.38
RBM39-215ENST00000442447 WAPLQ7Z5K2 1190 aa23.64■■□□□ 1.37
RBM39-215ENST00000442447 PHF23Q9BUL5 403 aaPredicted RBP23.64■■□□□ 1.37
RBM39-215ENST00000442447 JCADQ9P266 1359 aa23.64■■□□□ 1.37
RBM39-215ENST00000442447 C1orf167Q5SNV9 1468 aa23.63■■□□□ 1.37
RBM39-215ENST00000442447 PLEKHH1Q9ULM0 1364 aa23.63■■□□□ 1.37
RBM39-215ENST00000442447 DHX57Q6P158 1386 aaKnown RBP23.62■■□□□ 1.37
RBM39-215ENST00000442447 CDC42BPGQ6DT37 1551 aa23.6■■□□□ 1.37
RBM39-215ENST00000442447 NHSL1Q5SYE7 1610 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms