RNA–Protein interactions for RNA: ENST00000440884.7

MARK3-206, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-206ENST00000440884 IQGAP3Q86VI3 1631 aa26.5■■□□□ 1.83
MARK3-206ENST00000440884 AMER1Q5JTC6 1135 aaPredicted RBP26.5■■□□□ 1.83
MARK3-206ENST00000440884 RNF17Q9BXT8 1623 aaKnown RBP26.49■■□□□ 1.83
MARK3-206ENST00000440884 SLFN5Q08AF3 891 aa26.49■■□□□ 1.83
MARK3-206ENST00000440884 FRAT2O75474 233 aaPredicted RBP26.47■■□□□ 1.83
MARK3-206ENST00000440884 CCDC146Q8IYE0 955 aa26.46■■□□□ 1.83
MARK3-206ENST00000440884 MAST1Q9Y2H9 1570 aa26.45■■□□□ 1.83
MARK3-206ENST00000440884 SPINK5Q9NQ38 1064 aaPredicted RBP26.45■■□□□ 1.82
MARK3-206ENST00000440884 CLASP1Q7Z460 1538 aa26.44■■□□□ 1.82
MARK3-206ENST00000440884 ATP10AO60312 1499 aa26.43■■□□□ 1.82
MARK3-206ENST00000440884 TRMT2AQ8IZ69 625 aaKnown RBP26.43■■□□□ 1.82
MARK3-206ENST00000440884 BCAR3O75815 825 aa26.41■■□□□ 1.82
MARK3-206ENST00000440884 ARHGAP5Q13017 1502 aa26.41■■□□□ 1.82
MARK3-206ENST00000440884 EIF3AQ14152 1382 aaKnown RBP26.38■■□□□ 1.81
MARK3-206ENST00000440884 PIK3C2GO75747 1445 aa26.38■■□□□ 1.81
MARK3-206ENST00000440884 ASXL1Q8IXJ9 1541 aa26.38■■□□□ 1.81
MARK3-206ENST00000440884 TTC37Q6PGP7 1564 aa26.38■■□□□ 1.81
MARK3-206ENST00000440884 IQGAP1P46940 1657 aa26.38■■□□□ 1.81
MARK3-206ENST00000440884 PLXNC1O60486 1568 aa26.38■■□□□ 1.81
MARK3-206ENST00000440884 SYNMO15061 1565 aa26.38■■□□□ 1.81
MARK3-206ENST00000440884 APAF1O14727 1248 aa26.37■■□□□ 1.81
MARK3-206ENST00000440884 NKTRP30414 1462 aaKnown RBP26.37■■□□□ 1.81
MARK3-206ENST00000440884 MADDQ8WXG6 1647 aa26.36■■□□□ 1.81
MARK3-206ENST00000440884 IGHDP01880 384 aa26.36■■□□□ 1.81
MARK3-206ENST00000440884 USP19O94966 1318 aa26.34■■□□□ 1.81
MARK3-206ENST00000440884 DUOX2Q9NRD8 1548 aa26.33■■□□□ 1.81
MARK3-206ENST00000440884 DMRT2Q9Y5R5 561 aa26.33■■□□□ 1.8
MARK3-206ENST00000440884 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.32■■□□□ 1.85e-6■□□□□ 9.5
MARK3-206ENST00000440884 CDCA8Q53HL2 280 aa26.32■■□□□ 1.8
MARK3-206ENST00000440884 ABCC2Q92887 1545 aa26.31■■□□□ 1.8
MARK3-206ENST00000440884 MYOM1P52179 1685 aa26.31■■□□□ 1.8
MARK3-206ENST00000440884 VIRMAQ69YN4 1812 aaKnown RBP26.31■■□□□ 1.8
MARK3-206ENST00000440884 CHD1O14646 1710 aa26.29■■□□□ 1.8
MARK3-206ENST00000440884 SCAF11Q99590 1463 aaKnown RBP26.29■■□□□ 1.8
MARK3-206ENST00000440884 E9PSI1 815 aa26.29■■□□□ 1.8
MARK3-206ENST00000440884 SEC24BO95487 1268 aa26.28■■□□□ 1.8
MARK3-206ENST00000440884 NPC1L1Q9UHC9 1359 aa26.27■■□□□ 1.8
MARK3-206ENST00000440884 SPHKAPQ2M3C7 1700 aa26.23■■□□□ 1.79
MARK3-206ENST00000440884 PANK1Q8TE04 598 aa26.23■■□□□ 1.79
MARK3-206ENST00000440884 CGNL1Q0VF96 1302 aa26.23■■□□□ 1.79
MARK3-206ENST00000440884 COG6Q9Y2V7 657 aa26.22■■□□□ 1.79
MARK3-206ENST00000440884 SCAPERQ9BY12 1400 aa26.22■■□□□ 1.79
MARK3-206ENST00000440884 CLUAP1Q96AJ1 413 aa26.21■■□□□ 1.79
MARK3-206ENST00000440884 PDE3AQ14432 1141 aa26.21■■□□□ 1.79
MARK3-206ENST00000440884 POGKQ9P215 609 aa26.2■■□□□ 1.78
MARK3-206ENST00000440884 CENPJQ9HC77 1338 aaPredicted RBP26.19■■□□□ 1.78
MARK3-206ENST00000440884 KDM5AP29375 1690 aaKnown RBP26.18■■□□□ 1.78
MARK3-206ENST00000440884 MAPK8IP3Q9UPT6 1336 aa26.18■■□□□ 1.78
MARK3-206ENST00000440884 CANXP27824 592 aaKnown RBP26.18■■□□□ 1.78
MARK3-206ENST00000440884 SLKQ9H2G2 1235 aaPredicted RBP26.17■■□□□ 1.78
MARK3-206ENST00000440884 NLRP1Q9C000 1473 aa26.17■■□□□ 1.78
MARK3-206ENST00000440884 CEP152O94986 1710 aa26.16■■□□□ 1.78
MARK3-206ENST00000440884 TRPM2O94759 1503 aa26.16■■□□□ 1.78
MARK3-206ENST00000440884 CARD14Q9BXL6 1004 aa26.16■■□□□ 1.78
MARK3-206ENST00000440884 CLTCL1P53675 1640 aa26.15■■□□□ 1.78
MARK3-206ENST00000440884 BECN1Q14457 450 aa26.15■■□□□ 1.78
MARK3-206ENST00000440884 WWC1Q8IX03 1113 aa26.15■■□□□ 1.78
MARK3-206ENST00000440884 FAM43AQ8N2R8 423 aa26.14■■□□□ 1.78
MARK3-206ENST00000440884 NINLQ9Y2I6 1382 aa26.13■■□□□ 1.77
MARK3-206ENST00000440884 EIF5BO60841 1220 aaKnown RBP26.11■■□□□ 1.77
MARK3-206ENST00000440884 NGEFQ8N5V2 710 aa26.11■■□□□ 1.77
MARK3-206ENST00000440884 ERVK-7P63135 1459 aa26.11■■□□□ 1.77
MARK3-206ENST00000440884 TRAPPC8Q9Y2L5 1435 aa26.11■■□□□ 1.77
MARK3-206ENST00000440884 STAC3Q96MF2 364 aa26.1■■□□□ 1.77
MARK3-206ENST00000440884 PTPRTO14522 1441 aa26.1■■□□□ 1.77
MARK3-206ENST00000440884 ANTXR1Q9H6X2 564 aa26.08■■□□□ 1.77
MARK3-206ENST00000440884 NEUROD2Q15784 382 aa26.08■■□□□ 1.77
MARK3-206ENST00000440884 TNNQ9UQP3 1299 aa26.08■■□□□ 1.77
MARK3-206ENST00000440884 ERCC6L2Q5T890 1561 aa26.08■■□□□ 1.77
MARK3-206ENST00000440884 CFAP70Q5T0N1 1121 aa26.07■■□□□ 1.76
MARK3-206ENST00000440884 PCDHB15Q9Y5E8 787 aa26.07■■□□□ 1.76
MARK3-206ENST00000440884 RRP7AQ9Y3A4 280 aaKnown RBP26.06■■□□□ 1.76
MARK3-206ENST00000440884 SHROOM2Q13796 1616 aa26.06■■□□□ 1.76
MARK3-206ENST00000440884 PLCH2O75038 1416 aa26.06■■□□□ 1.76
MARK3-206ENST00000440884 RLBP1P12271 317 aa26.05■■□□□ 1.76
MARK3-206ENST00000440884 RARSP54136 660 aaKnown RBP26.05■■□□□ 1.76
MARK3-206ENST00000440884 POLR3AO14802 1390 aaPredicted RBP26.05■■□□□ 1.76
MARK3-206ENST00000440884 EFCAB2Q5VUJ9 269 aa26.05■■□□□ 1.76
MARK3-206ENST00000440884 ABCC1P33527 1531 aa26.04■■□□□ 1.76
MARK3-206ENST00000440884 PMFBP1Q8TBY8 1022 aa26.04■■□□□ 1.76
MARK3-206ENST00000440884 KIAA1210Q9ULL0 1709 aa26.04■■□□□ 1.76
MARK3-206ENST00000440884 TBC1D32Q96NH3 1257 aa26.03■■□□□ 1.76
MARK3-206ENST00000440884 PDZRN3Q9UPQ7 1066 aa26.02■■□□□ 1.76
MARK3-206ENST00000440884 TBC1D2Q9BYX2 928 aa26.01■■□□□ 1.76
MARK3-206ENST00000440884 BCL2L13Q9BXK5 485 aa26.01■■□□□ 1.75
MARK3-206ENST00000440884 SPAG9O60271 1321 aaKnown RBP26.01■■□□□ 1.75
MARK3-206ENST00000440884 UPF2Q9HAU5 1272 aaKnown RBP26.01■■□□□ 1.75
MARK3-206ENST00000440884 SHPRHQ149N8 1683 aa26■■□□□ 1.75
MARK3-206ENST00000440884 ADGRF5Q8IZF2 1346 aa25.99■■□□□ 1.75
MARK3-206ENST00000440884 TNNT2P45379 298 aaPredicted RBP25.99■■□□□ 1.75
MARK3-206ENST00000440884 AFAP1Q8N556 730 aa25.99■■□□□ 1.75
MARK3-206ENST00000440884 RSPH6AQ9H0K4 717 aa25.99■■□□□ 1.75
MARK3-206ENST00000440884 ABCA6Q8N139 1617 aa25.98■■□□□ 1.75
MARK3-206ENST00000440884 TCP11L2Q8N4U5 519 aa25.98■■□□□ 1.75
MARK3-206ENST00000440884 RUNDC1Q96C34 613 aa25.97■■□□□ 1.75
MARK3-206ENST00000440884 TET3O43151 1660 aa25.97■■□□□ 1.75
MARK3-206ENST00000440884 RRAGDQ9NQL2 400 aaPredicted RBP25.96■■□□□ 1.75
MARK3-206ENST00000440884 MAP3K4Q9Y6R4 1608 aa25.96■■□□□ 1.75
MARK3-206ENST00000440884 L1TD1Q5T7N2 865 aaKnown RBP25.96■■□□□ 1.75
MARK3-206ENST00000440884 SLC24A1O60721 1099 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms