RNA–Protein interactions for RNA: ENST00000439697.1

GTF3C5-206, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 823 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-206ENST00000439697 SLC26A8Q96RN1 970 aa17.52■□□□□ 0.4
GTF3C5-206ENST00000439697 TMEM2Q9UHN6 1383 aa17.52■□□□□ 0.39
GTF3C5-206ENST00000439697 IQGAP3Q86VI3 1631 aa17.51■□□□□ 0.39
GTF3C5-206ENST00000439697 ITGAEP38570 1179 aa17.51■□□□□ 0.39
GTF3C5-206ENST00000439697 SLC52A1Q9NWF4 448 aa17.51■□□□□ 0.39
GTF3C5-206ENST00000439697 PROSER2Q86WR7 435 aaPredicted RBP17.5■□□□□ 0.39
GTF3C5-206ENST00000439697 STAG3Q9UJ98 1225 aa17.5■□□□□ 0.39
GTF3C5-206ENST00000439697 GCC2Q8IWJ2 1684 aa17.5■□□□□ 0.39
GTF3C5-206ENST00000439697 ADGRB3O60242 1522 aa17.48■□□□□ 0.39
GTF3C5-206ENST00000439697 KCNA6P17658 529 aa17.48■□□□□ 0.39
GTF3C5-206ENST00000439697 NAIPQ13075 1403 aa17.47■□□□□ 0.39
GTF3C5-206ENST00000439697 E9PCH4 1651 aa17.46■□□□□ 0.39
GTF3C5-206ENST00000439697 NUP155O75694 1391 aa17.46■□□□□ 0.39
GTF3C5-206ENST00000439697 HFM1A2PYH4 1435 aa17.42■□□□□ 0.38
GTF3C5-206ENST00000439697 ZFYVE9O95405 1425 aa17.42■□□□□ 0.38
GTF3C5-206ENST00000439697 BCANQ96GW7 911 aa17.42■□□□□ 0.38
GTF3C5-206ENST00000439697 TMEM131LA2VDJ0 1609 aa17.42■□□□□ 0.38
GTF3C5-206ENST00000439697 MSH6P52701 1360 aa17.41■□□□□ 0.38
GTF3C5-206ENST00000439697 JCADQ9P266 1359 aa17.41■□□□□ 0.38
GTF3C5-206ENST00000439697 TRIM52Q96A61 297 aa17.41■□□□□ 0.38
GTF3C5-206ENST00000439697 SLAIN2Q9P270 581 aa17.41■□□□□ 0.38
GTF3C5-206ENST00000439697 PHLPP1O60346 1717 aa17.41■□□□□ 0.38
GTF3C5-206ENST00000439697 LRP6O75581 1613 aa17.4■□□□□ 0.38
GTF3C5-206ENST00000439697 UPF1Q92900 1129 aaKnown RBP eCLIP17.4■□□□□ 0.38
GTF3C5-206ENST00000439697 NKTRP30414 1462 aaKnown RBP17.39■□□□□ 0.37
GTF3C5-206ENST00000439697 NWD1Q149M9 1564 aa17.39■□□□□ 0.37
GTF3C5-206ENST00000439697 MEX3CQ5U5Q3 659 aaKnown RBP17.36■□□□□ 0.37
GTF3C5-206ENST00000439697 COL16A1Q07092 1604 aaPredicted RBP17.36■□□□□ 0.37
GTF3C5-206ENST00000439697 MYO5BQ9ULV0 1848 aa17.35■□□□□ 0.37
GTF3C5-206ENST00000439697 RIMS2Q9UQ26 1411 aa17.35■□□□□ 0.37
GTF3C5-206ENST00000439697 PLEKHG1Q9ULL1 1385 aa17.34■□□□□ 0.37
GTF3C5-206ENST00000439697 SPHKAPQ2M3C7 1700 aa17.33■□□□□ 0.36
GTF3C5-206ENST00000439697 ZNF772Q68DY9 489 aaPredicted RBP17.31■□□□□ 0.36
GTF3C5-206ENST00000439697 C14orf37Q86TY3 774 aa17.31■□□□□ 0.36
GTF3C5-206ENST00000439697 SPATA31A6Q5VVP1 1343 aa17.3■□□□□ 0.36
GTF3C5-206ENST00000439697 HDGFP51858 240 aaKnown RBP17.3■□□□□ 0.36
GTF3C5-206ENST00000439697 TRPM2O94759 1503 aa17.3■□□□□ 0.36
GTF3C5-206ENST00000439697 PPP1R15AO75807 674 aaPredicted RBP17.29■□□□□ 0.36
GTF3C5-206ENST00000439697 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.29■□□□□ 0.36
GTF3C5-206ENST00000439697 NUTM2BA6NNL0 878 aaPredicted RBP17.28■□□□□ 0.36
GTF3C5-206ENST00000439697 NUTM2EB1AL46 878 aaPredicted RBP17.28■□□□□ 0.36
GTF3C5-206ENST00000439697 NUTM2DQ5VT03 806 aaPredicted RBP17.28■□□□□ 0.36
GTF3C5-206ENST00000439697 NUTM2AQ8IVF1 878 aaPredicted RBP17.28■□□□□ 0.36
GTF3C5-206ENST00000439697 ADAMTS13Q76LX8 1427 aa17.28■□□□□ 0.36
GTF3C5-206ENST00000439697 SRCAPQ6ZRS2 3230 aa17.28■□□□□ 0.36
GTF3C5-206ENST00000439697 CHGAP10645 457 aaKnown RBP17.27■□□□□ 0.36
GTF3C5-206ENST00000439697 RXRBP28702 533 aa17.27■□□□□ 0.36
GTF3C5-206ENST00000439697 TBX22Q9Y458 520 aa17.27■□□□□ 0.36
GTF3C5-206ENST00000439697 CLTCL1P53675 1640 aa17.26■□□□□ 0.35
GTF3C5-206ENST00000439697 CHD2O14647 1828 aaKnown RBP17.26■□□□□ 0.35
GTF3C5-206ENST00000439697 AHDC1Q5TGY3 1603 aaPredicted RBP17.24■□□□□ 0.35
GTF3C5-206ENST00000439697 DIP2AQ14689 1571 aa17.23■□□□□ 0.35
GTF3C5-206ENST00000439697 ATF3P18847 181 aa17.23■□□□□ 0.35
GTF3C5-206ENST00000439697 BRINP3Q76B58 766 aa17.22■□□□□ 0.35
GTF3C5-206ENST00000439697 CADPS2Q86UW7 1296 aa17.22■□□□□ 0.35
GTF3C5-206ENST00000439697 SLC4A1APQ9BWU0 796 aaKnown RBP17.22■□□□□ 0.35
GTF3C5-206ENST00000439697 PIK3R4Q99570 1358 aa17.22■□□□□ 0.35
GTF3C5-206ENST00000439697 SHPRHQ149N8 1683 aa17.22■□□□□ 0.35
GTF3C5-206ENST00000439697 AFF2P51816 1311 aa17.21■□□□□ 0.35
GTF3C5-206ENST00000439697 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.21■□□□□ 0.35
GTF3C5-206ENST00000439697 SETBP1Q9Y6X0 1596 aa17.21■□□□□ 0.35
GTF3C5-206ENST00000439697 C19orf44Q9H6X5 657 aa17.21■□□□□ 0.35
GTF3C5-206ENST00000439697 NRXN3Q9Y4C0 1643 aa17.21■□□□□ 0.35
GTF3C5-206ENST00000439697 NEXMIFQ5QGS0 1516 aa17.21■□□□□ 0.34
GTF3C5-206ENST00000439697 NCOA3Q9Y6Q9 1424 aa17.2■□□□□ 0.34
GTF3C5-206ENST00000439697 RGS12O14924 1447 aa17.18■□□□□ 0.34
GTF3C5-206ENST00000439697 CDK12Q9NYV4 1490 aaPredicted RBP17.17■□□□□ 0.34
GTF3C5-206ENST00000439697 PTPRUQ92729 1446 aa17.16■□□□□ 0.34
GTF3C5-206ENST00000439697 SETD5Q9C0A6 1442 aa17.16■□□□□ 0.34
GTF3C5-206ENST00000439697 DDX17Q92841 729 aaKnown RBP17.16■□□□□ 0.34
GTF3C5-206ENST00000439697 C8orf37Q96NL8 207 aa17.16■□□□□ 0.34
GTF3C5-206ENST00000439697 MPHOSPH9Q99550 1183 aa17.16■□□□□ 0.34
GTF3C5-206ENST00000439697 AMOTL2Q9Y2J4 779 aa17.16■□□□□ 0.34
GTF3C5-206ENST00000439697 KIF1BO60333 1816 aa17.16■□□□□ 0.34
GTF3C5-206ENST00000439697 ACIN1Q9UKV3 1341 aaKnown RBP17.16■□□□□ 0.34
GTF3C5-206ENST00000439697 ZNF326Q5BKZ1 582 aaKnown RBP17.15■□□□□ 0.34
GTF3C5-206ENST00000439697 FOXD1Q16676 465 aa17.14■□□□□ 0.33
GTF3C5-206ENST00000439697 ASXL1Q8IXJ9 1541 aa17.14■□□□□ 0.33
GTF3C5-206ENST00000439697 QTRT2Q9H974 415 aaKnown RBP17.13■□□□□ 0.33
GTF3C5-206ENST00000439697 RPGRIP1LQ68CZ1 1315 aa17.12■□□□□ 0.33
GTF3C5-206ENST00000439697 XRN1Q8IZH2 1706 aaKnown RBP17.12■□□□□ 0.33
GTF3C5-206ENST00000439697 METP08581 1390 aa17.12■□□□□ 0.33
GTF3C5-206ENST00000439697 SPATA31E1Q6ZUB1 1445 aa17.11■□□□□ 0.33
GTF3C5-206ENST00000439697 RBM6P78332 1123 aaKnown RBP17.1■□□□□ 0.33
GTF3C5-206ENST00000439697 RAB3GAP2Q9H2M9 1393 aa17.1■□□□□ 0.33
GTF3C5-206ENST00000439697 MST1RQ04912 1400 aa17.1■□□□□ 0.33
GTF3C5-206ENST00000439697 VGFO15240 615 aaPredicted RBP17.09■□□□□ 0.33
GTF3C5-206ENST00000439697 ADAMTS2O95450 1211 aa17.09■□□□□ 0.33
GTF3C5-206ENST00000439697 CCDC144AA2RUR9 1427 aa17.09■□□□□ 0.33
GTF3C5-206ENST00000439697 PNPLA6Q8IY17 1366 aa17.08■□□□□ 0.32
GTF3C5-206ENST00000439697 PPLO60437 1756 aa17.07■□□□□ 0.32
GTF3C5-206ENST00000439697 PRAG1Q86YV5 1406 aa17.07■□□□□ 0.32
GTF3C5-206ENST00000439697 LRRC59Q96AG4 307 aaKnown RBP17.07■□□□□ 0.32
GTF3C5-206ENST00000439697 NHSL1Q5SYE7 1610 aa17.07■□□□□ 0.32
GTF3C5-206ENST00000439697 DCCP43146 1447 aa17.06■□□□□ 0.32
GTF3C5-206ENST00000439697 HRCP23327 699 aa17.05■□□□□ 0.32
GTF3C5-206ENST00000439697 NGLY1Q96IV0 654 aa17.05■□□□□ 0.32
GTF3C5-206ENST00000439697 IFT172Q9UG01 1749 aa17.02■□□□□ 0.32
GTF3C5-206ENST00000439697 PTCH1Q13635 1447 aa17.02■□□□□ 0.31
GTF3C5-206ENST00000439697 ATAD2Q6PL18 1390 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms