RNA–Protein interactions for RNA: ENST00000439338.5

UBE2F-212, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-212ENST00000439338 SETD5Q9C0A6 1442 aa30.64■■■□□ 2.49
UBE2F-212ENST00000439338 PPP1R15AO75807 674 aaPredicted RBP30.62■■■□□ 2.49
UBE2F-212ENST00000439338 HDGFP51858 240 aaKnown RBP30.61■■■□□ 2.49
UBE2F-212ENST00000439338 PLEKHG1Q9ULL1 1385 aa30.61■■■□□ 2.49
UBE2F-212ENST00000439338 SLC26A8Q96RN1 970 aa30.6■■■□□ 2.49
UBE2F-212ENST00000439338 SENP3Q9H4L4 574 aaPredicted RBP30.6■■■□□ 2.49
UBE2F-212ENST00000439338 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.59■■■□□ 2.49
UBE2F-212ENST00000439338 BCANQ96GW7 911 aa30.59■■■□□ 2.49
UBE2F-212ENST00000439338 NUTM2DQ5VT03 806 aaPredicted RBP30.58■■■□□ 2.49
UBE2F-212ENST00000439338 KIF1BO60333 1816 aa30.58■■■□□ 2.49
UBE2F-212ENST00000439338 LRRC7Q96NW7 1537 aa30.57■■■□□ 2.48
UBE2F-212ENST00000439338 UBAP1LF5GYI3 381 aa30.55■■■□□ 2.48
UBE2F-212ENST00000439338 FOXD1Q16676 465 aa30.54■■■□□ 2.48
UBE2F-212ENST00000439338 MPHOSPH9Q99550 1183 aa30.54■■■□□ 2.48
UBE2F-212ENST00000439338 RAB3GAP2Q9H2M9 1393 aa30.54■■■□□ 2.48
UBE2F-212ENST00000439338 ZNF326Q5BKZ1 582 aaKnown RBP30.52■■■□□ 2.48
UBE2F-212ENST00000439338 NWD1Q149M9 1564 aa30.49■■■□□ 2.47
UBE2F-212ENST00000439338 ACIN1Q9UKV3 1341 aaKnown RBP30.49■■■□□ 2.47
UBE2F-212ENST00000439338 ADAMTS13Q76LX8 1427 aa30.48■■■□□ 2.47
UBE2F-212ENST00000439338 NEXMIFQ5QGS0 1516 aa30.48■■■□□ 2.47
UBE2F-212ENST00000439338 KCNA6P17658 529 aa30.48■■■□□ 2.47
UBE2F-212ENST00000439338 DIP2AQ14689 1571 aa30.47■■■□□ 2.47
UBE2F-212ENST00000439338 XIRP1Q702N8 1843 aaKnown RBP30.47■■■□□ 2.47
UBE2F-212ENST00000439338 CHD2O14647 1828 aaKnown RBP30.45■■■□□ 2.46
UBE2F-212ENST00000439338 TBX22Q9Y458 520 aa30.43■■■□□ 2.46
UBE2F-212ENST00000439338 NRXN3Q9Y4C0 1643 aa30.43■■■□□ 2.46
UBE2F-212ENST00000439338 NKTRP30414 1462 aaKnown RBP30.43■■■□□ 2.46
UBE2F-212ENST00000439338 SETBP1Q9Y6X0 1596 aa30.41■■■□□ 2.46
UBE2F-212ENST00000439338 CCDC144AA2RUR9 1427 aa30.41■■■□□ 2.46
UBE2F-212ENST00000439338 ALKQ9UM73 1620 aa30.41■■■□□ 2.46
UBE2F-212ENST00000439338 TOM1O60784 492 aa30.41■■■□□ 2.46
UBE2F-212ENST00000439338 TMEM94Q12767 1356 aa30.39■■■□□ 2.45
UBE2F-212ENST00000439338 PIP4K2BP78356 416 aa30.36■■■□□ 2.45
UBE2F-212ENST00000439338 PROSER2Q86WR7 435 aaPredicted RBP30.36■■■□□ 2.45
UBE2F-212ENST00000439338 SCAF1Q9H7N4 1312 aaKnown RBP30.36■■■□□ 2.45
UBE2F-212ENST00000439338 PIK3R4Q99570 1358 aa30.35■■■□□ 2.45
UBE2F-212ENST00000439338 PPLO60437 1756 aa30.35■■■□□ 2.45
UBE2F-212ENST00000439338 RBM33Q96EV2 1170 aaKnown RBP30.33■■■□□ 2.45
UBE2F-212ENST00000439338 RPGRIP1LQ68CZ1 1315 aa30.31■■■□□ 2.44
UBE2F-212ENST00000439338 SPATA31E1Q6ZUB1 1445 aa30.3■■■□□ 2.44
UBE2F-212ENST00000439338 PTPRUQ92729 1446 aa30.3■■■□□ 2.44
UBE2F-212ENST00000439338 HRCP23327 699 aa30.29■■■□□ 2.44
UBE2F-212ENST00000439338 VGFO15240 615 aaPredicted RBP30.27■■■□□ 2.44
UBE2F-212ENST00000439338 XRN1Q8IZH2 1706 aaKnown RBP30.26■■■□□ 2.43
UBE2F-212ENST00000439338 IFT172Q9UG01 1749 aa30.25■■■□□ 2.43
UBE2F-212ENST00000439338 RGL3Q3MIN7 710 aa30.25■■■□□ 2.43
UBE2F-212ENST00000439338 METP08581 1390 aa30.25■■■□□ 2.43
UBE2F-212ENST00000439338 AMOTL2Q9Y2J4 779 aa30.24■■■□□ 2.43
UBE2F-212ENST00000439338 SETD1AO15047 1707 aaKnown RBP30.24■■■□□ 2.43
UBE2F-212ENST00000439338 MSH6P52701 1360 aa30.21■■■□□ 2.43
UBE2F-212ENST00000439338 HSPA1LP34931 641 aa30.19■■■□□ 2.42
UBE2F-212ENST00000439338 ANKRD30BQ9BXX2 1392 aa30.18■■■□□ 2.42
UBE2F-212ENST00000439338 NCOA3Q9Y6Q9 1424 aa30.18■■■□□ 2.42
UBE2F-212ENST00000439338 ADGRF5Q8IZF2 1346 aa30.17■■■□□ 2.42
UBE2F-212ENST00000439338 C14orf37Q86TY3 774 aa30.14■■■□□ 2.42
UBE2F-212ENST00000439338 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.12■■■□□ 2.41
UBE2F-212ENST00000439338 FAM135BQ49AJ0 1406 aa30.09■■■□□ 2.41
UBE2F-212ENST00000439338 ROBO1Q9Y6N7 1651 aa30.09■■■□□ 2.41
UBE2F-212ENST00000439338 PIK3C2GO75747 1445 aa30.07■■■□□ 2.4
UBE2F-212ENST00000439338 MYOM2P54296 1465 aa30.06■■■□□ 2.4
UBE2F-212ENST00000439338 PTCH1Q13635 1447 aa30.05■■■□□ 2.4
UBE2F-212ENST00000439338 C19orf44Q9H6X5 657 aa30.05■■■□□ 2.4
UBE2F-212ENST00000439338 SLAIN2Q9P270 581 aa30.03■■■□□ 2.4
UBE2F-212ENST00000439338 PRAG1Q86YV5 1406 aa30.03■■■□□ 2.4
UBE2F-212ENST00000439338 NRXN1Q9ULB1 1477 aa30.02■■■□□ 2.4
UBE2F-212ENST00000439338 NALCNQ8IZF0 1738 aa30.02■■■□□ 2.4
UBE2F-212ENST00000439338 ROBO2Q9HCK4 1378 aa30.02■■■□□ 2.4
UBE2F-212ENST00000439338 ASXL1Q8IXJ9 1541 aa30.01■■■□□ 2.4
UBE2F-212ENST00000439338 ATF3P18847 181 aa30.01■■■□□ 2.39
UBE2F-212ENST00000439338 CADPS2Q86UW7 1296 aa30.01■■■□□ 2.39
UBE2F-212ENST00000439338 DCCP43146 1447 aa30■■■□□ 2.39
UBE2F-212ENST00000439338 ADGRL3Q9HAR2 1447 aa30■■■□□ 2.39
UBE2F-212ENST00000439338 LAMC1P11047 1609 aa29.96■■■□□ 2.39
UBE2F-212ENST00000439338 KNDC1Q76NI1 1749 aa29.94■■■□□ 2.38
UBE2F-212ENST00000439338 LRPPRCP42704 1394 aaKnown RBP29.94■■■□□ 2.38
UBE2F-212ENST00000439338 DISP3Q9P2K9 1392 aa29.94■■■□□ 2.38
UBE2F-212ENST00000439338 TMEM132EQ6IEE7 984 aa29.94■■■□□ 2.38
UBE2F-212ENST00000439338 C14orf93Q9H972 538 aaKnown RBP29.93■■■□□ 2.38
UBE2F-212ENST00000439338 STK26Q9P289 416 aa29.92■■■□□ 2.38
UBE2F-212ENST00000439338 TECPR2O15040 1411 aa29.91■■■□□ 2.38
UBE2F-212ENST00000439338 MST1RQ04912 1400 aa29.91■■■□□ 2.38
UBE2F-212ENST00000439338 CFAP70Q5T0N1 1121 aa29.91■■■□□ 2.38
UBE2F-212ENST00000439338 PHLPP1O60346 1717 aa29.91■■■□□ 2.38
UBE2F-212ENST00000439338 DCAF11Q8TEB1 546 aa29.9■■■□□ 2.38
UBE2F-212ENST00000439338 MED1Q15648 1581 aaPredicted RBP29.9■■■□□ 2.38
UBE2F-212ENST00000439338 DHX57Q6P158 1386 aaKnown RBP29.9■■■□□ 2.38
UBE2F-212ENST00000439338 YTHDC2Q9H6S0 1430 aaKnown RBP29.89■■■□□ 2.38
UBE2F-212ENST00000439338 KDM2AQ9Y2K7 1162 aa29.89■■■□□ 2.38
UBE2F-212ENST00000439338 TRIM26Q12899 539 aaPredicted RBP29.88■■■□□ 2.37
UBE2F-212ENST00000439338 ABCC11Q96J66 1382 aa29.88■■■□□ 2.37
UBE2F-212ENST00000439338 BRINP3Q76B58 766 aa29.84■■■□□ 2.37
UBE2F-212ENST00000439338 AHDC1Q5TGY3 1603 aaPredicted RBP29.84■■■□□ 2.37
UBE2F-212ENST00000439338 COL16A1Q07092 1604 aaPredicted RBP29.82■■■□□ 2.36
UBE2F-212ENST00000439338 PLEKHH1Q9ULM0 1364 aa29.82■■■□□ 2.36
UBE2F-212ENST00000439338 WAPLQ7Z5K2 1190 aa29.82■■■□□ 2.36
UBE2F-212ENST00000439338 STAC3Q96MF2 364 aa29.81■■■□□ 2.36
UBE2F-212ENST00000439338 ADGRB1O14514 1584 aa29.81■■■□□ 2.36
UBE2F-212ENST00000439338 CDC42BPGQ6DT37 1551 aa29.8■■■□□ 2.36
UBE2F-212ENST00000439338 C1orf167Q5SNV9 1468 aa29.79■■■□□ 2.36
UBE2F-212ENST00000439338 NHSL1Q5SYE7 1610 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms