RNA–Protein interactions for RNA: ENST00000438326.2

PMS2P3-206, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 5

Gene PMS2P3, Length 229 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-206ENST00000438326 TMEM94Q12767 1356 aa8.26□□□□□ -1.09
PMS2P3-206ENST00000438326 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.26□□□□□ -1.09
PMS2P3-206ENST00000438326 SLC52A1Q9NWF4 448 aa8.26□□□□□ -1.09
PMS2P3-206ENST00000438326 KCNA6P17658 529 aa8.25□□□□□ -1.09
PMS2P3-206ENST00000438326 IDI1Q13907 227 aa8.25□□□□□ -1.09
PMS2P3-206ENST00000438326 STAG3Q9UJ98 1225 aa8.25□□□□□ -1.09
PMS2P3-206ENST00000438326 PHLPP1O60346 1717 aa8.25□□□□□ -1.09
PMS2P3-206ENST00000438326 PLEKHG1Q9ULL1 1385 aa8.24□□□□□ -1.09
PMS2P3-206ENST00000438326 ROCK1Q13464 1354 aa8.23□□□□□ -1.09
PMS2P3-206ENST00000438326 NCOA3Q9Y6Q9 1424 aa8.23□□□□□ -1.09
PMS2P3-206ENST00000438326 COL16A1Q07092 1604 aaPredicted RBP8.23□□□□□ -1.09
PMS2P3-206ENST00000438326 CHIC2Q9UKJ5 165 aa8.23□□□□□ -1.09
PMS2P3-206ENST00000438326 SPHKAPQ2M3C7 1700 aa8.23□□□□□ -1.09
PMS2P3-206ENST00000438326 MSH6P52701 1360 aa8.22□□□□□ -1.09
PMS2P3-206ENST00000438326 RIMS2Q9UQ26 1411 aa8.22□□□□□ -1.09
PMS2P3-206ENST00000438326 SHPRHQ149N8 1683 aa8.21□□□□□ -1.09
PMS2P3-206ENST00000438326 XRN1Q8IZH2 1706 aaKnown RBP8.21□□□□□ -1.09
PMS2P3-206ENST00000438326 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.21□□□□□ -1.09
PMS2P3-206ENST00000438326 TRPM2O94759 1503 aa8.21□□□□□ -1.1
PMS2P3-206ENST00000438326 SLC26A8Q96RN1 970 aa8.21□□□□□ -1.1
PMS2P3-206ENST00000438326 AHDC1Q5TGY3 1603 aaPredicted RBP8.21□□□□□ -1.1
PMS2P3-206ENST00000438326 PIK3R4Q99570 1358 aa8.21□□□□□ -1.1
PMS2P3-206ENST00000438326 SETBP1Q9Y6X0 1596 aa8.2□□□□□ -1.1
PMS2P3-206ENST00000438326 FAM50AQ14320 339 aaKnown RBP8.2□□□□□ -1.1
PMS2P3-206ENST00000438326 PROSER2Q86WR7 435 aaPredicted RBP8.2□□□□□ -1.1
PMS2P3-206ENST00000438326 NRXN3Q9Y4C0 1643 aa8.2□□□□□ -1.1
PMS2P3-206ENST00000438326 ADAMTS13Q76LX8 1427 aa8.2□□□□□ -1.1
PMS2P3-206ENST00000438326 HDGFP51858 240 aaKnown RBP8.19□□□□□ -1.1
PMS2P3-206ENST00000438326 RGS17Q9UGC6 210 aaPredicted RBP8.19□□□□□ -1.1
PMS2P3-206ENST00000438326 SETD1AO15047 1707 aaKnown RBP8.19□□□□□ -1.1
PMS2P3-206ENST00000438326 PPP1R15AO75807 674 aaPredicted RBP8.18□□□□□ -1.1
PMS2P3-206ENST00000438326 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.18□□□□□ -1.1
PMS2P3-206ENST00000438326 TBX22Q9Y458 520 aa8.18□□□□□ -1.1
PMS2P3-206ENST00000438326 JCADQ9P266 1359 aa8.18□□□□□ -1.1
PMS2P3-206ENST00000438326 DCCP43146 1447 aa8.18□□□□□ -1.1
PMS2P3-206ENST00000438326 NHSL1Q5SYE7 1610 aa8.17□□□□□ -1.1
PMS2P3-206ENST00000438326 KIF1BO60333 1816 aa8.16□□□□□ -1.1
PMS2P3-206ENST00000438326 SLAIN2Q9P270 581 aa8.16□□□□□ -1.1
PMS2P3-206ENST00000438326 CLTCL1P53675 1640 aa8.15□□□□□ -1.1
PMS2P3-206ENST00000438326 BCANQ96GW7 911 aa8.15□□□□□ -1.1
PMS2P3-206ENST00000438326 NALCNQ8IZF0 1738 aa8.15□□□□□ -1.11
PMS2P3-206ENST00000438326 LRP6O75581 1613 aa8.14□□□□□ -1.11
PMS2P3-206ENST00000438326 NEXMIFQ5QGS0 1516 aa8.14□□□□□ -1.11
PMS2P3-206ENST00000438326 ASXL1Q8IXJ9 1541 aa8.14□□□□□ -1.11
PMS2P3-206ENST00000438326 NUP155O75694 1391 aa8.14□□□□□ -1.11
PMS2P3-206ENST00000438326 SPATA31A6Q5VVP1 1343 aa8.14□□□□□ -1.11
PMS2P3-206ENST00000438326 CADPS2Q86UW7 1296 aa8.14□□□□□ -1.11
PMS2P3-206ENST00000438326 RBM33Q96EV2 1170 aaKnown RBP8.14□□□□□ -1.11
PMS2P3-206ENST00000438326 LAMC1P11047 1609 aa8.14□□□□□ -1.11
PMS2P3-206ENST00000438326 PTPRUQ92729 1446 aa8.13□□□□□ -1.11
PMS2P3-206ENST00000438326 POTEAQ6S8J7 498 aa8.13□□□□□ -1.11
PMS2P3-206ENST00000438326 C19orf44Q9H6X5 657 aa8.13□□□□□ -1.11
PMS2P3-206ENST00000438326 PRAG1Q86YV5 1406 aa8.12□□□□□ -1.11
PMS2P3-206ENST00000438326 MST1RQ04912 1400 aa8.12□□□□□ -1.11
PMS2P3-206ENST00000438326 ADGRL3Q9HAR2 1447 aa8.12□□□□□ -1.11
PMS2P3-206ENST00000438326 CHGAP10645 457 aaKnown RBP8.11□□□□□ -1.11
PMS2P3-206ENST00000438326 ATF3P18847 181 aa8.11□□□□□ -1.11
PMS2P3-206ENST00000438326 C14orf37Q86TY3 774 aa8.11□□□□□ -1.11
PMS2P3-206ENST00000438326 PPLO60437 1756 aa8.11□□□□□ -1.11
PMS2P3-206ENST00000438326 CDK12Q9NYV4 1490 aaPredicted RBP8.11□□□□□ -1.11
PMS2P3-206ENST00000438326 SETD5Q9C0A6 1442 aa8.11□□□□□ -1.11
PMS2P3-206ENST00000438326 RRBP1Q9P2E9 1410 aaKnown RBP8.11□□□□□ -1.11
PMS2P3-206ENST00000438326 PTCH1Q13635 1447 aa8.1□□□□□ -1.11
PMS2P3-206ENST00000438326 NUTM2DQ5VT03 806 aaPredicted RBP8.09□□□□□ -1.11
PMS2P3-206ENST00000438326 BRINP3Q76B58 766 aa8.09□□□□□ -1.11
PMS2P3-206ENST00000438326 AMOTL2Q9Y2J4 779 aa8.09□□□□□ -1.11
PMS2P3-206ENST00000438326 NAIPQ13075 1403 aa8.09□□□□□ -1.11
PMS2P3-206ENST00000438326 METP08581 1390 aa8.09□□□□□ -1.12
PMS2P3-206ENST00000438326 ZNF772Q68DY9 489 aaPredicted RBP8.08□□□□□ -1.12
PMS2P3-206ENST00000438326 COL22A1Q8NFW1 1626 aaPredicted RBP8.07□□□□□ -1.12
PMS2P3-206ENST00000438326 IFT172Q9UG01 1749 aa8.07□□□□□ -1.12
PMS2P3-206ENST00000438326 CDC42BPGQ6DT37 1551 aa8.07□□□□□ -1.12
PMS2P3-206ENST00000438326 HFM1A2PYH4 1435 aa8.07□□□□□ -1.12
PMS2P3-206ENST00000438326 MEX3CQ5U5Q3 659 aaKnown RBP8.06□□□□□ -1.12
PMS2P3-206ENST00000438326 KNDC1Q76NI1 1749 aa8.06□□□□□ -1.12
PMS2P3-206ENST00000438326 MARF1Q9Y4F3 1742 aaKnown RBP8.06□□□□□ -1.12
PMS2P3-206ENST00000438326 ITGAEP38570 1179 aa8.05□□□□□ -1.12
PMS2P3-206ENST00000438326 PNPLA6Q8IY17 1366 aa8.05□□□□□ -1.12
PMS2P3-206ENST00000438326 C1orf167Q5SNV9 1468 aa8.05□□□□□ -1.12
PMS2P3-206ENST00000438326 ZNF326Q5BKZ1 582 aaKnown RBP8.04□□□□□ -1.12
PMS2P3-206ENST00000438326 LRRC59Q96AG4 307 aaKnown RBP8.03□□□□□ -1.12
PMS2P3-206ENST00000438326 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.03□□□□□ -1.12
PMS2P3-206ENST00000438326 RGS12O14924 1447 aa8.03□□□□□ -1.12
PMS2P3-206ENST00000438326 RPGRIP1LQ68CZ1 1315 aa8.03□□□□□ -1.12
PMS2P3-206ENST00000438326 ROBO2Q9HCK4 1378 aa8.02□□□□□ -1.13
PMS2P3-206ENST00000438326 VGFO15240 615 aaPredicted RBP8.02□□□□□ -1.13
PMS2P3-206ENST00000438326 TECPR2O15040 1411 aa8.02□□□□□ -1.13
PMS2P3-206ENST00000438326 AFF2P51816 1311 aa8.02□□□□□ -1.13
PMS2P3-206ENST00000438326 KIF1AQ12756 1690 aa8.02□□□□□ -1.13
PMS2P3-206ENST00000438326 FMN2Q9NZ56 1722 aa8.01□□□□□ -1.13
PMS2P3-206ENST00000438326 RXRBP28702 533 aa8.01□□□□□ -1.13
PMS2P3-206ENST00000438326 UPF1Q92900 1129 aaKnown RBP eCLIP8.01□□□□□ -1.13
PMS2P3-206ENST00000438326 MYOM2P54296 1465 aa8□□□□□ -1.13
PMS2P3-206ENST00000438326 NUTM2BA6NNL0 878 aaPredicted RBP8□□□□□ -1.13
PMS2P3-206ENST00000438326 NUTM2EB1AL46 878 aaPredicted RBP8□□□□□ -1.13
PMS2P3-206ENST00000438326 NUTM2AQ8IVF1 878 aaPredicted RBP8□□□□□ -1.13
PMS2P3-206ENST00000438326 TRIM52Q96A61 297 aa8□□□□□ -1.13
PMS2P3-206ENST00000438326 SOS2Q07890 1332 aaPredicted RBP8□□□□□ -1.13
PMS2P3-206ENST00000438326 PXDNQ92626 1479 aa8□□□□□ -1.13
PMS2P3-206ENST00000438326 CCDC144AA2RUR9 1427 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms