RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 PRDM15P57071 1507 aaPredicted RBP21.86■■□□□ 1.09
TTC3-209ENST00000438055 EIF2AK4Q9P2K8 1649 aaKnown RBP21.85■■□□□ 1.09
TTC3-209ENST00000438055 MAGI2Q86UL8 1455 aa21.84■■□□□ 1.09
TTC3-209ENST00000438055 SCAF11Q99590 1463 aaKnown RBP21.84■■□□□ 1.09
TTC3-209ENST00000438055 PLEKHH1Q9ULM0 1364 aa21.84■■□□□ 1.09
TTC3-209ENST00000438055 BACH2Q9BYV9 841 aa21.84■■□□□ 1.09
TTC3-209ENST00000438055 IQGAP3Q86VI3 1631 aa21.83■■□□□ 1.09
TTC3-209ENST00000438055 STAC3Q96MF2 364 aa21.83■■□□□ 1.09
TTC3-209ENST00000438055 DUSP27Q5VZP5 1158 aa21.83■■□□□ 1.08
TTC3-209ENST00000438055 MORC1Q86VD1 984 aa21.83■■□□□ 1.08
TTC3-209ENST00000438055 SAFB2Q14151 953 aaKnown RBP eCLIP21.82■■□□□ 1.08
TTC3-209ENST00000438055 TMEM132EQ6IEE7 984 aa21.82■■□□□ 1.08
TTC3-209ENST00000438055 MS4A1P11836 297 aa21.81■■□□□ 1.08
TTC3-209ENST00000438055 RRP7AQ9Y3A4 280 aaKnown RBP21.81■■□□□ 1.08
TTC3-209ENST00000438055 PLXNC1O60486 1568 aa21.81■■□□□ 1.08
TTC3-209ENST00000438055 BLMP54132 1417 aaPredicted RBP21.8■■□□□ 1.08
TTC3-209ENST00000438055 FRAT1Q92837 279 aaPredicted RBP21.8■■□□□ 1.08
TTC3-209ENST00000438055 FANCAO15360 1455 aa21.8■■□□□ 1.08
TTC3-209ENST00000438055 ATP10AO60312 1499 aa21.79■■□□□ 1.08
TTC3-209ENST00000438055 WDR7Q9Y4E6 1490 aa21.78■■□□□ 1.08
TTC3-209ENST00000438055 SLC24A1O60721 1099 aa21.78■■□□□ 1.08
TTC3-209ENST00000438055 BCAR3O75815 825 aa21.78■■□□□ 1.08
TTC3-209ENST00000438055 NEFMP07197 916 aa21.78■■□□□ 1.08
TTC3-209ENST00000438055 ABCC1P33527 1531 aa21.77■■□□□ 1.08
TTC3-209ENST00000438055 E9PCH4 1651 aa21.77■■□□□ 1.08
TTC3-209ENST00000438055 ADGRL1O94910 1474 aa21.77■■□□□ 1.07
TTC3-209ENST00000438055 CENPJQ9HC77 1338 aaPredicted RBP21.76■■□□□ 1.07
TTC3-209ENST00000438055 SLC12A5Q9H2X9 1139 aa21.76■■□□□ 1.07
TTC3-209ENST00000438055 SLFN5Q08AF3 891 aa21.75■■□□□ 1.07
TTC3-209ENST00000438055 ZCCHC11Q5TAX3 1644 aaKnown RBP21.75■■□□□ 1.07
TTC3-209ENST00000438055 SLC4A3P48751 1232 aa21.75■■□□□ 1.07
TTC3-209ENST00000438055 CENPQQ7L2Z9 268 aaPredicted RBP21.74■■□□□ 1.07
TTC3-209ENST00000438055 SPINK5Q9NQ38 1064 aaPredicted RBP21.74■■□□□ 1.07
TTC3-209ENST00000438055 CARD14Q9BXL6 1004 aa21.74■■□□□ 1.07
TTC3-209ENST00000438055 RTEL1-TNFRSF6BF6WH68 1400 aa21.72■■□□□ 1.07
TTC3-209ENST00000438055 E9PSI1 815 aa21.72■■□□□ 1.07
TTC3-209ENST00000438055 ASXL1Q8IXJ9 1541 aa21.72■■□□□ 1.07
TTC3-209ENST00000438055 STK26Q9P289 416 aa21.71■■□□□ 1.07
TTC3-209ENST00000438055 DDRGK1Q96HY6 314 aa21.71■■□□□ 1.07
TTC3-209ENST00000438055 ZMYM4Q5VZL5 1548 aa21.7■■□□□ 1.07
TTC3-209ENST00000438055 UGGT1Q9NYU2 1555 aa21.69■■□□□ 1.06
TTC3-209ENST00000438055 SHROOM2Q13796 1616 aa21.69■■□□□ 1.06
TTC3-209ENST00000438055 BCL2L13Q9BXK5 485 aa21.69■■□□□ 1.06
TTC3-209ENST00000438055 COG6Q9Y2V7 657 aa21.68■■□□□ 1.06
TTC3-209ENST00000438055 CFAP53Q96M91 514 aa21.68■■□□□ 1.06
TTC3-209ENST00000438055 DMRT2Q9Y5R5 561 aa21.67■■□□□ 1.06
TTC3-209ENST00000438055 TRPM2O94759 1503 aa21.67■■□□□ 1.06
TTC3-209ENST00000438055 NOS1P29475 1434 aa21.66■■□□□ 1.06
TTC3-209ENST00000438055 ATP7AQ04656 1500 aa21.66■■□□□ 1.06
TTC3-209ENST00000438055 PANK1Q8TE04 598 aa21.66■■□□□ 1.06
TTC3-209ENST00000438055 ZFYVE16Q7Z3T8 1539 aa21.66■■□□□ 1.06
TTC3-209ENST00000438055 PTPRTO14522 1441 aa21.66■■□□□ 1.06
TTC3-209ENST00000438055 UHRF1BP1LA0JNW5 1464 aa21.65■■□□□ 1.06
TTC3-209ENST00000438055 INSRP06213 1382 aa21.65■■□□□ 1.06
TTC3-209ENST00000438055 U2AF1L5P0DN76 240 aaPredicted RBP21.65■■□□□ 1.06
TTC3-209ENST00000438055 U2AF1Q01081 240 aaKnown RBP eCLIP21.65■■□□□ 1.06
TTC3-209ENST00000438055 CLUAP1Q96AJ1 413 aa21.64■■□□□ 1.06
TTC3-209ENST00000438055 LAMC1P11047 1609 aa21.64■■□□□ 1.05
TTC3-209ENST00000438055 MTHFSP49914 203 aa21.64■■□□□ 1.05
TTC3-209ENST00000438055 FAM161AQ3B820 660 aa21.64■■□□□ 1.05
TTC3-209ENST00000438055 CLTCL1P53675 1640 aa21.64■■□□□ 1.05
TTC3-209ENST00000438055 MADDQ8WXG6 1647 aa21.64■■□□□ 1.05
TTC3-209ENST00000438055 PIK3C2GO75747 1445 aa21.63■■□□□ 1.05
TTC3-209ENST00000438055 U2SURPO15042 1029 aaKnown RBP21.63■■□□□ 1.05
TTC3-209ENST00000438055 PPM1GO15355 546 aaPredicted RBP21.63■■□□□ 1.05
TTC3-209ENST00000438055 SRPK2P78362 688 aaKnown RBP21.63■■□□□ 1.05
TTC3-209ENST00000438055 ASXL2Q76L83 1435 aa21.63■■□□□ 1.05
TTC3-209ENST00000438055 NSD3Q9BZ95 1437 aa21.63■■□□□ 1.05
TTC3-209ENST00000438055 RAPGEF3O95398 923 aa21.62■■□□□ 1.05
TTC3-209ENST00000438055 TCP11L2Q8N4U5 519 aa21.62■■□□□ 1.05
TTC3-209ENST00000438055 ZNF521Q96K83 1311 aa21.62■■□□□ 1.05
TTC3-209ENST00000438055 WWC1Q8IX03 1113 aa21.62■■□□□ 1.05
TTC3-209ENST00000438055 CABP2Q9NPB3 220 aa21.61■■□□□ 1.05
TTC3-209ENST00000438055 CGNL1Q0VF96 1302 aa21.59■■□□□ 1.05
TTC3-209ENST00000438055 STAG3Q9UJ98 1225 aa21.59■■□□□ 1.05
TTC3-209ENST00000438055 NKTRP30414 1462 aaKnown RBP21.58■■□□□ 1.05
TTC3-209ENST00000438055 RUNDC1Q96C34 613 aa21.58■■□□□ 1.04
TTC3-209ENST00000438055 KDM2BQ8NHM5 1336 aa21.57■■□□□ 1.04
TTC3-209ENST00000438055 CFAP65Q6ZU64 1925 aaKnown RBP21.57■■□□□ 1.04
TTC3-209ENST00000438055 ERVK-7P63135 1459 aa21.57■■□□□ 1.04
TTC3-209ENST00000438055 NPC1L1Q9UHC9 1359 aa21.56■■□□□ 1.04
TTC3-209ENST00000438055 SYNMO15061 1565 aa21.56■■□□□ 1.04
TTC3-209ENST00000438055 C14orf93Q9H972 538 aaKnown RBP21.55■■□□□ 1.04
TTC3-209ENST00000438055 POGKQ9P215 609 aa21.55■■□□□ 1.04
TTC3-209ENST00000438055 EVC2Q86UK5 1308 aa21.55■■□□□ 1.04
TTC3-209ENST00000438055 VGFO15240 615 aaPredicted RBP21.55■■□□□ 1.04
TTC3-209ENST00000438055 SPHKAPQ2M3C7 1700 aa21.55■■□□□ 1.04
TTC3-209ENST00000438055 RNF17Q9BXT8 1623 aaKnown RBP21.54■■□□□ 1.04
TTC3-209ENST00000438055 IGHDP01880 384 aa21.53■■□□□ 1.04
TTC3-209ENST00000438055 CD109Q6YHK3 1445 aa21.52■■□□□ 1.04
TTC3-209ENST00000438055 OSCARQ8IYS5 282 aa21.52■■□□□ 1.04
TTC3-209ENST00000438055 NGEFQ8N5V2 710 aa21.52■■□□□ 1.04
TTC3-209ENST00000438055 GGNBP2Q9H3C7 697 aa21.52■■□□□ 1.04
TTC3-209ENST00000438055 FTSJ3Q8IY81 847 aaKnown RBP21.52■■□□□ 1.04
TTC3-209ENST00000438055 CLASP1Q7Z460 1538 aa21.52■■□□□ 1.04
TTC3-209ENST00000438055 MINK1Q8N4C8 1332 aaPredicted RBP21.52■■□□□ 1.03
TTC3-209ENST00000438055 TET3O43151 1660 aa21.51■■□□□ 1.03
TTC3-209ENST00000438055 IQGAP1P46940 1657 aa21.5■■□□□ 1.03
TTC3-209ENST00000438055 TRMT2AQ8IZ69 625 aaKnown RBP21.5■■□□□ 1.03
TTC3-209ENST00000438055 PDE3AQ14432 1141 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms