RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 MYOM2P54296 1465 aa30.46■■■□□ 2.47
YBX1-203ENST00000436427 PRAG1Q86YV5 1406 aa30.46■■■□□ 2.47
YBX1-203ENST00000436427 NUTM2DQ5VT03 806 aaPredicted RBP30.43■■■□□ 2.46
YBX1-203ENST00000436427 CEP170BQ9Y4F5 1589 aaPredicted RBP30.43■■■□□ 2.46
YBX1-203ENST00000436427 ADGRF5Q8IZF2 1346 aa30.41■■■□□ 2.46
YBX1-203ENST00000436427 SETD1BQ9UPS6 1966 aaKnown RBP30.4■■■□□ 2.46
YBX1-203ENST00000436427 RIMS2Q9UQ26 1411 aa30.4■■■□□ 2.46
YBX1-203ENST00000436427 VGFO15240 615 aaPredicted RBP30.4■■■□□ 2.46
YBX1-203ENST00000436427 ZNF142P52746 1687 aaPredicted RBP30.39■■■□□ 2.46
YBX1-203ENST00000436427 TMEM2Q9UHN6 1383 aa30.37■■■□□ 2.45
YBX1-203ENST00000436427 NRXN1Q9ULB1 1477 aa30.36■■■□□ 2.45
YBX1-203ENST00000436427 THEMISQ8N1K5 641 aaPredicted RBP30.36■■■□□ 2.45
YBX1-203ENST00000436427 RALGAPBQ86X10 1494 aa30.35■■■□□ 2.45
YBX1-203ENST00000436427 TRPM1Q7Z4N2 1603 aa30.35■■■□□ 2.45
YBX1-203ENST00000436427 ZFYVE9O95405 1425 aa30.35■■■□□ 2.45
YBX1-203ENST00000436427 HDGFP51858 240 aaKnown RBP30.32■■■□□ 2.44
YBX1-203ENST00000436427 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.32■■■□□ 2.44
YBX1-203ENST00000436427 PIK3C2GO75747 1445 aa30.32■■■□□ 2.44
YBX1-203ENST00000436427 ROCK2O75116 1388 aaKnown RBP30.31■■■□□ 2.44
YBX1-203ENST00000436427 SLIT1O75093 1534 aa30.29■■■□□ 2.44
YBX1-203ENST00000436427 SENP3Q9H4L4 574 aaPredicted RBP30.29■■■□□ 2.44
YBX1-203ENST00000436427 ARHGAP23Q9P227 1491 aa30.27■■■□□ 2.44
YBX1-203ENST00000436427 NBPF1Q3BBV0 1214 aa30.27■■■□□ 2.44
YBX1-203ENST00000436427 CFAP70Q5T0N1 1121 aa30.26■■■□□ 2.43
YBX1-203ENST00000436427 CARD11Q9BXL7 1154 aa30.26■■■□□ 2.43
YBX1-203ENST00000436427 EID1Q9Y6B2 187 aa30.26■■■□□ 2.43
YBX1-203ENST00000436427 KIAA1210Q9ULL0 1709 aa30.26■■■□□ 2.43
YBX1-203ENST00000436427 TXNDC2Q86VQ3 553 aa30.25■■■□□ 2.43
YBX1-203ENST00000436427 LTKP29376 864 aa30.22■■■□□ 2.43
YBX1-203ENST00000436427 C14orf93Q9H972 538 aaKnown RBP30.22■■■□□ 2.43
YBX1-203ENST00000436427 LAMC1P11047 1609 aa30.2■■■□□ 2.43
YBX1-203ENST00000436427 GPRASP1Q5JY77 1395 aa30.2■■■□□ 2.42
YBX1-203ENST00000436427 BCANQ96GW7 911 aa30.19■■■□□ 2.42
YBX1-203ENST00000436427 SCAF11Q99590 1463 aaKnown RBP30.18■■■□□ 2.42
YBX1-203ENST00000436427 EIF4G2P78344 907 aaKnown RBP eCLIP30.17■■■□□ 2.42
YBX1-203ENST00000436427 PLEKHG1Q9ULL1 1385 aa30.16■■■□□ 2.42
YBX1-203ENST00000436427 USP47Q96K76 1375 aa30.15■■■□□ 2.42
YBX1-203ENST00000436427 ALKQ9UM73 1620 aa30.15■■■□□ 2.42
YBX1-203ENST00000436427 ANKLE2Q86XL3 938 aa30.15■■■□□ 2.42
YBX1-203ENST00000436427 IQGAP1P46940 1657 aa30.15■■■□□ 2.42
YBX1-203ENST00000436427 SETBP1Q9Y6X0 1596 aa30.15■■■□□ 2.42
YBX1-203ENST00000436427 NRXN3Q9Y4C0 1643 aa30.14■■■□□ 2.41
YBX1-203ENST00000436427 HSPA5P11021 654 aaKnown RBP30.13■■■□□ 2.41
YBX1-203ENST00000436427 HIRIP3Q9BW71 556 aaPredicted RBP30.12■■■□□ 2.41
YBX1-203ENST00000436427 TMEM132EQ6IEE7 984 aa30.12■■■□□ 2.41
YBX1-203ENST00000436427 ADGRB1O14514 1584 aa30.1■■■□□ 2.41
YBX1-203ENST00000436427 LMTK3Q96Q04 1460 aa30.09■■■□□ 2.41
YBX1-203ENST00000436427 ZNF316A6NFI3 1004 aaPredicted RBP30.09■■■□□ 2.41
YBX1-203ENST00000436427 ASXL1Q8IXJ9 1541 aa30.06■■■□□ 2.4
YBX1-203ENST00000436427 SETD1AO15047 1707 aaKnown RBP30.06■■■□□ 2.4
YBX1-203ENST00000436427 POLR1AO95602 1720 aaPredicted RBP30.06■■■□□ 2.4
YBX1-203ENST00000436427 ADAMTS13Q76LX8 1427 aa30.05■■■□□ 2.4
YBX1-203ENST00000436427 HSPA2P54652 639 aa30.05■■■□□ 2.4
YBX1-203ENST00000436427 SLC26A8Q96RN1 970 aa30.03■■■□□ 2.4
YBX1-203ENST00000436427 NCKAP5LQ9HCH0 1330 aa30.02■■■□□ 2.4
YBX1-203ENST00000436427 EIF3AQ14152 1382 aaKnown RBP30.01■■■□□ 2.39
YBX1-203ENST00000436427 ST20-MTHFSA0A0A6YYL1 179 aa30.01■■■□□ 2.39
YBX1-203ENST00000436427 TRAK1Q9UPV9 953 aa30.01■■■□□ 2.39
YBX1-203ENST00000436427 METP08581 1390 aa30■■■□□ 2.39
YBX1-203ENST00000436427 STK26Q9P289 416 aa30■■■□□ 2.39
YBX1-203ENST00000436427 DIP2AQ14689 1571 aa30■■■□□ 2.39
YBX1-203ENST00000436427 NPHP4O75161 1426 aaPredicted RBP29.99■■■□□ 2.39
YBX1-203ENST00000436427 YTHDC2Q9H6S0 1430 aaKnown RBP29.99■■■□□ 2.39
YBX1-203ENST00000436427 MED14O60244 1454 aa29.98■■■□□ 2.39
YBX1-203ENST00000436427 TBX22Q9Y458 520 aa29.96■■■□□ 2.39
YBX1-203ENST00000436427 LRPPRCP42704 1394 aaKnown RBP29.93■■■□□ 2.38
YBX1-203ENST00000436427 ARHGEF28Q8N1W1 1705 aaKnown RBP29.92■■■□□ 2.38
YBX1-203ENST00000436427 CENPJQ9HC77 1338 aaPredicted RBP29.88■■■□□ 2.37
YBX1-203ENST00000436427 ABCC11Q96J66 1382 aa29.87■■■□□ 2.37
YBX1-203ENST00000436427 PTPRUQ92729 1446 aa29.86■■■□□ 2.37
YBX1-203ENST00000436427 KNDC1Q76NI1 1749 aa29.85■■■□□ 2.37
YBX1-203ENST00000436427 DLC1Q96QB1 1528 aa29.85■■■□□ 2.37
YBX1-203ENST00000436427 TESK2Q96S53 571 aa29.85■■■□□ 2.37
YBX1-203ENST00000436427 PIK3R4Q99570 1358 aa29.85■■■□□ 2.37
YBX1-203ENST00000436427 STRCQ7RTU9 1775 aa29.84■■■□□ 2.37
YBX1-203ENST00000436427 PRAM1Q96QH2 718 aa29.84■■■□□ 2.37
YBX1-203ENST00000436427 POGKQ9P215 609 aa29.84■■■□□ 2.37
YBX1-203ENST00000436427 QRICH2Q9H0J4 1663 aa29.83■■■□□ 2.37
YBX1-203ENST00000436427 AMOTL2Q9Y2J4 779 aa29.82■■■□□ 2.36
YBX1-203ENST00000436427 TECPR2O15040 1411 aa29.82■■■□□ 2.36
YBX1-203ENST00000436427 C11orf95C9JLR9 678 aaPredicted RBP29.81■■■□□ 2.36
YBX1-203ENST00000436427 SAFB2Q14151 953 aaKnown RBP eCLIP29.81■■■□□ 2.36
YBX1-203ENST00000436427 CPS1P31327 1500 aa29.81■■■□□ 2.36
YBX1-203ENST00000436427 TMF1P82094 1093 aa29.79■■■□□ 2.36
YBX1-203ENST00000436427 WASHC2AQ641Q2 1341 aa29.78■■■□□ 2.36
YBX1-203ENST00000436427 WAPLQ7Z5K2 1190 aa29.78■■■□□ 2.36
YBX1-203ENST00000436427 XRN1Q8IZH2 1706 aaKnown RBP29.77■■■□□ 2.36
YBX1-203ENST00000436427 ROBO2Q9HCK4 1378 aa29.77■■■□□ 2.36
YBX1-203ENST00000436427 CHD2O14647 1828 aaKnown RBP29.77■■■□□ 2.36
YBX1-203ENST00000436427 CCDC7Q96M83 1385 aa29.76■■■□□ 2.35
YBX1-203ENST00000436427 DISP3Q9P2K9 1392 aa29.76■■■□□ 2.35
YBX1-203ENST00000436427 SBNO2Q9Y2G9 1366 aa29.76■■■□□ 2.35
YBX1-203ENST00000436427 KIF7Q2M1P5 1343 aa29.76■■■□□ 2.35
YBX1-203ENST00000436427 FAM135BQ49AJ0 1406 aa29.76■■■□□ 2.35
YBX1-203ENST00000436427 SIRT1Q96EB6 747 aa29.76■■■□□ 2.35
YBX1-203ENST00000436427 POLR3GLQ9BT43 218 aa29.76■■■□□ 2.35
YBX1-203ENST00000436427 PLEKHH1Q9ULM0 1364 aa29.75■■■□□ 2.35
YBX1-203ENST00000436427 SLC24A1O60721 1099 aa29.75■■■□□ 2.35
YBX1-203ENST00000436427 PTCH1Q13635 1447 aa29.74■■■□□ 2.35
YBX1-203ENST00000436427 KCNA6P17658 529 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms