RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 ADGBQ8N7X0 1667 aa13.8□□□□□ -0.2
NOD1-206ENST00000434755 NGDNQ8NEJ9 315 aaKnown RBP13.79□□□□□ -0.2
NOD1-206ENST00000434755 BRD4O60885 1362 aaPredicted RBP13.78□□□□□ -0.2
NOD1-206ENST00000434755 CALD1Q05682 793 aaKnown RBP13.76□□□□□ -0.21
NOD1-206ENST00000434755 NBPF8Q3BBV2 869 aa13.76□□□□□ -0.21
NOD1-206ENST00000434755 MLH3Q9UHC1 1453 aa13.76□□□□□ -0.21
NOD1-206ENST00000434755 CHMP4AQ9BY43 222 aa13.76□□□□□ -0.21
NOD1-206ENST00000434755 MYH16Q9H6N6 1097 aa13.76□□□□□ -0.21
NOD1-206ENST00000434755 CHMP4BQ9H444 224 aaKnown RBP13.76□□□□□ -0.21
NOD1-206ENST00000434755 MBD5Q9P267 1494 aa13.75□□□□□ -0.21
NOD1-206ENST00000434755 CFAP70Q5T0N1 1121 aa13.75□□□□□ -0.21
NOD1-206ENST00000434755 ABCC1P33527 1531 aa13.75□□□□□ -0.21
NOD1-206ENST00000434755 ARHGEF12Q9NZN5 1544 aa13.75□□□□□ -0.21
NOD1-206ENST00000434755 TNRQ92752 1358 aa13.75□□□□□ -0.21
NOD1-206ENST00000434755 ERCC6L2Q5T890 1561 aa13.74□□□□□ -0.21
NOD1-206ENST00000434755 FTSJ3Q8IY81 847 aaKnown RBP13.74□□□□□ -0.21
NOD1-206ENST00000434755 ZFYVE16Q7Z3T8 1539 aa13.73□□□□□ -0.21
NOD1-206ENST00000434755 PANK3Q9H999 370 aa13.73□□□□□ -0.21
NOD1-206ENST00000434755 U2AF1L5P0DN76 240 aaPredicted RBP13.73□□□□□ -0.21
NOD1-206ENST00000434755 U2AF1Q01081 240 aaKnown RBP eCLIP13.73□□□□□ -0.21
NOD1-206ENST00000434755 MINK1Q8N4C8 1332 aaPredicted RBP13.73□□□□□ -0.21
NOD1-206ENST00000434755 EIF5BO60841 1220 aaKnown RBP13.72□□□□□ -0.21
NOD1-206ENST00000434755 B4GALNT3Q6L9W6 998 aa13.71□□□□□ -0.21
NOD1-206ENST00000434755 ATAD2Q6PL18 1390 aa13.71□□□□□ -0.21
NOD1-206ENST00000434755 TTC37Q6PGP7 1564 aa13.71□□□□□ -0.21
NOD1-206ENST00000434755 SAMD9LQ8IVG5 1584 aa13.71□□□□□ -0.21
NOD1-206ENST00000434755 RGS3P49796 1198 aa13.71□□□□□ -0.22
NOD1-206ENST00000434755 IDI1Q13907 227 aa13.71□□□□□ -0.22
NOD1-206ENST00000434755 MAST1Q9Y2H9 1570 aa13.7□□□□□ -0.22
NOD1-206ENST00000434755 COG3Q96JB2 828 aa13.7□□□□□ -0.22
NOD1-206ENST00000434755 RALGAPBQ86X10 1494 aa13.7□□□□□ -0.22
NOD1-206ENST00000434755 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.68□□□□□ -0.22
NOD1-206ENST00000434755 ATF3P18847 181 aa13.68□□□□□ -0.22
NOD1-206ENST00000434755 LMOD3Q0VAK6 560 aa13.68□□□□□ -0.22
NOD1-206ENST00000434755 ZNF692Q9BU19 519 aaPredicted RBP13.68□□□□□ -0.22
NOD1-206ENST00000434755 EIF2AK4Q9P2K8 1649 aaKnown RBP13.68□□□□□ -0.22
NOD1-206ENST00000434755 RCAN3Q9UKA8 241 aa13.68□□□□□ -0.22
NOD1-206ENST00000434755 NBR1Q14596 966 aa13.67□□□□□ -0.22
NOD1-206ENST00000434755 ABCA9Q8IUA7 1624 aa13.67□□□□□ -0.22
NOD1-206ENST00000434755 PZPP20742 1482 aa13.66□□□□□ -0.22
NOD1-206ENST00000434755 TMEM132EQ6IEE7 984 aa13.66□□□□□ -0.22
NOD1-206ENST00000434755 SCAF11Q99590 1463 aaKnown RBP13.66□□□□□ -0.22
NOD1-206ENST00000434755 HECW2Q9P2P5 1572 aa13.65□□□□□ -0.22
NOD1-206ENST00000434755 C14orf93Q9H972 538 aaKnown RBP13.65□□□□□ -0.22
NOD1-206ENST00000434755 DMRT2Q9Y5R5 561 aa13.65□□□□□ -0.22
NOD1-206ENST00000434755 PLXNC1O60486 1568 aa13.65□□□□□ -0.22
NOD1-206ENST00000434755 GOLGA2Q08379 1002 aa13.65□□□□□ -0.22
NOD1-206ENST00000434755 NBPF1Q3BBV0 1214 aa13.65□□□□□ -0.22
NOD1-206ENST00000434755 DDRGK1Q96HY6 314 aa13.65□□□□□ -0.22
NOD1-206ENST00000434755 KDM5DQ9BY66 1539 aa13.64□□□□□ -0.23
NOD1-206ENST00000434755 CDC42BPAQ5VT25 1732 aa13.64□□□□□ -0.23
NOD1-206ENST00000434755 AEBP2Q6ZN18 517 aaPredicted RBP13.64□□□□□ -0.23
NOD1-206ENST00000434755 LTV1Q96GA3 475 aaPredicted RBP13.64□□□□□ -0.23
NOD1-206ENST00000434755 PRAM1Q96QH2 718 aa13.64□□□□□ -0.23
NOD1-206ENST00000434755 UHRF1BP1Q6BDS2 1440 aa13.64□□□□□ -0.23
NOD1-206ENST00000434755 RTF1Q92541 710 aaKnown RBP13.64□□□□□ -0.23
NOD1-206ENST00000434755 CCDC146Q8IYE0 955 aa13.63□□□□□ -0.23
NOD1-206ENST00000434755 GPRASP1Q5JY77 1395 aa13.63□□□□□ -0.23
NOD1-206ENST00000434755 NINLQ9Y2I6 1382 aa13.63□□□□□ -0.23
NOD1-206ENST00000434755 DNAJC5Q9H3Z4 198 aa13.63□□□□□ -0.23
NOD1-206ENST00000434755 CSB-PGBD3P0DP91 1061 aa13.63□□□□□ -0.23
NOD1-206ENST00000434755 AMPHP49418 695 aa13.63□□□□□ -0.23
NOD1-206ENST00000434755 PROSER2Q86WR7 435 aaPredicted RBP13.63□□□□□ -0.23
NOD1-206ENST00000434755 NOS1P29475 1434 aa13.63□□□□□ -0.23
NOD1-206ENST00000434755 ZMYM3Q14202 1370 aa13.62□□□□□ -0.23
NOD1-206ENST00000434755 FBXO31Q5XUX0 539 aaPredicted RBP13.62□□□□□ -0.23
NOD1-206ENST00000434755 PSME1Q06323 249 aa13.61□□□□□ -0.23
NOD1-206ENST00000434755 PUS7Q96PZ0 661 aaKnown RBP13.61□□□□□ -0.23
NOD1-206ENST00000434755 RIMBP3CA6NJZ7 1639 aa13.61□□□□□ -0.23
NOD1-206ENST00000434755 RIMBP3BA6NNM3 1639 aa13.61□□□□□ -0.23
NOD1-206ENST00000434755 RIMBP3Q9UFD9 1639 aa13.61□□□□□ -0.23
NOD1-206ENST00000434755 ZNF330Q9Y3S2 320 aaPredicted RBP13.59□□□□□ -0.23
NOD1-206ENST00000434755 RIMS2Q9UQ26 1411 aa13.58□□□□□ -0.23
NOD1-206ENST00000434755 NPHP1O15259 732 aa13.58□□□□□ -0.24
NOD1-206ENST00000434755 PRAG1Q86YV5 1406 aa13.58□□□□□ -0.24
NOD1-206ENST00000434755 RRP7AQ9Y3A4 280 aaKnown RBP13.58□□□□□ -0.24
NOD1-206ENST00000434755 ADGRF5Q8IZF2 1346 aa13.58□□□□□ -0.24
NOD1-206ENST00000434755 E9PSI1 815 aa13.57□□□□□ -0.24
NOD1-206ENST00000434755 GLI2P10070 1586 aa13.57□□□□□ -0.24
NOD1-206ENST00000434755 IPO8O15397 1037 aaKnown RBP13.57□□□□□ -0.24
NOD1-206ENST00000434755 APBB1O00213 710 aa13.57□□□□□ -0.24
NOD1-206ENST00000434755 CDK19Q9BWU1 502 aa13.57□□□□□ -0.24
NOD1-206ENST00000434755 CCDC61Q9Y6R9 512 aa13.57□□□□□ -0.24
NOD1-206ENST00000434755 TCERG1O14776 1098 aaKnown RBP13.56□□□□□ -0.24
NOD1-206ENST00000434755 CABP2Q9NPB3 220 aa13.56□□□□□ -0.24
NOD1-206ENST00000434755 AAMPQ13685 434 aa13.55□□□□□ -0.24
NOD1-206ENST00000434755 CLUAP1Q96AJ1 413 aa13.55□□□□□ -0.24
NOD1-206ENST00000434755 SLC26A8Q96RN1 970 aa13.55□□□□□ -0.24
NOD1-206ENST00000434755 DIAPH1O60610 1272 aaKnown RBP13.54□□□□□ -0.24
NOD1-206ENST00000434755 OS9Q13438 667 aaPredicted RBP13.54□□□□□ -0.24
NOD1-206ENST00000434755 PNISRQ8TF01 805 aaKnown RBP13.54□□□□□ -0.24
NOD1-206ENST00000434755 CCDC9Q9Y3X0 531 aaKnown RBP13.54□□□□□ -0.24
NOD1-206ENST00000434755 CFAP44Q96MT7 982 aa13.54□□□□□ -0.24
NOD1-206ENST00000434755 YEATS2Q9ULM3 1422 aa13.53□□□□□ -0.24
NOD1-206ENST00000434755 ELL2O00472 640 aaPredicted RBP13.53□□□□□ -0.24
NOD1-206ENST00000434755 CEBPAP49715 358 aaPredicted RBP13.53□□□□□ -0.24
NOD1-206ENST00000434755 SMG6Q86US8 1419 aaKnown RBP13.53□□□□□ -0.24
NOD1-206ENST00000434755 TAOK2Q9UL54 1235 aa13.53□□□□□ -0.24
NOD1-206ENST00000434755 ARHGAP31Q2M1Z3 1444 aa13.52□□□□□ -0.24
NOD1-206ENST00000434755 NSD2O96028 1365 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms