RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 AAMPQ13685 434 aa7.84□□□□□ -1.15
RFC3-202ENST00000434425 FAM163AQ96GL9 167 aaPredicted RBP7.84□□□□□ -1.15
RFC3-202ENST00000434425 MFRPQ9BY79 579 aa7.84□□□□□ -1.15
RFC3-202ENST00000434425 TTC37Q6PGP7 1564 aa7.84□□□□□ -1.15
RFC3-202ENST00000434425 FER1L4A9Z1Z3 1794 aa7.84□□□□□ -1.16
RFC3-202ENST00000434425 SCAPERQ9BY12 1400 aa7.83□□□□□ -1.16
RFC3-202ENST00000434425 ZFYVE16Q7Z3T8 1539 aa7.83□□□□□ -1.16
RFC3-202ENST00000434425 RBM25P49756 843 aaKnown RBP7.83□□□□□ -1.16
RFC3-202ENST00000434425 IFNL1Q8IU54 200 aa7.83□□□□□ -1.16
RFC3-202ENST00000434425 CERS3Q8IU89 383 aa7.83□□□□□ -1.16
RFC3-202ENST00000434425 ZNF579Q8NAF0 562 aaKnown RBP7.83□□□□□ -1.16
RFC3-202ENST00000434425 ZMYM4Q5VZL5 1548 aa7.83□□□□□ -1.16
RFC3-202ENST00000434425 SETD1BQ9UPS6 1966 aaKnown RBP7.82□□□□□ -1.16
RFC3-202ENST00000434425 MAGI2Q86UL8 1455 aa7.82□□□□□ -1.16
RFC3-202ENST00000434425 TRAIPQ9BWF2 469 aa7.82□□□□□ -1.16
RFC3-202ENST00000434425 RYDENQ9NUL5 291 aaKnown RBP7.82□□□□□ -1.16
RFC3-202ENST00000434425 EFCAB5A4FU69 1503 aa7.82□□□□□ -1.16
RFC3-202ENST00000434425 PLCH2O75038 1416 aa7.82□□□□□ -1.16
RFC3-202ENST00000434425 STRCQ7RTU9 1775 aa7.82□□□□□ -1.16
RFC3-202ENST00000434425 CFAP74Q9C0B2 1584 aa7.82□□□□□ -1.16
RFC3-202ENST00000434425 DISP3Q9P2K9 1392 aa7.82□□□□□ -1.16
RFC3-202ENST00000434425 MAP3K13O43283 966 aa7.81□□□□□ -1.16
RFC3-202ENST00000434425 PPP1R37O75864 691 aa7.81□□□□□ -1.16
RFC3-202ENST00000434425 CENPBP07199 599 aaPredicted RBP7.81□□□□□ -1.16
RFC3-202ENST00000434425 ATP1B4Q9UN42 357 aaPredicted RBP7.81□□□□□ -1.16
RFC3-202ENST00000434425 ATP10AO60312 1499 aa7.81□□□□□ -1.16
RFC3-202ENST00000434425 NEUROD2Q15784 382 aa7.81□□□□□ -1.16
RFC3-202ENST00000434425 AFAP1Q8N556 730 aa7.81□□□□□ -1.16
RFC3-202ENST00000434425 CWC22Q9HCG8 908 aaKnown RBP7.81□□□□□ -1.16
RFC3-202ENST00000434425 CDK13Q14004 1512 aaKnown RBP7.81□□□□□ -1.16
RFC3-202ENST00000434425 ARHGEF12Q9NZN5 1544 aa7.8□□□□□ -1.16
RFC3-202ENST00000434425 SOCS7O14512 581 aa7.8□□□□□ -1.16
RFC3-202ENST00000434425 EFCAB2Q5VUJ9 269 aa7.8□□□□□ -1.16
RFC3-202ENST00000434425 KIF12Q96FN5 646 aa7.8□□□□□ -1.16
RFC3-202ENST00000434425 NAP1L5Q96NT1 182 aaPredicted RBP7.8□□□□□ -1.16
RFC3-202ENST00000434425 PREX1Q8TCU6 1659 aa7.79□□□□□ -1.16
RFC3-202ENST00000434425 FOXD4L5Q5VV16 416 aaPredicted RBP7.79□□□□□ -1.16
RFC3-202ENST00000434425 EFCAB3Q8N7B9 438 aa7.79□□□□□ -1.16
RFC3-202ENST00000434425 FOXD4L4Q8WXT5 416 aaPredicted RBP7.79□□□□□ -1.16
RFC3-202ENST00000434425 C9orf84Q5VXU9 1444 aa7.78□□□□□ -1.16
RFC3-202ENST00000434425 ZEB1P37275 1124 aaPredicted RBP7.78□□□□□ -1.16
RFC3-202ENST00000434425 MFAP1P55081 439 aaKnown RBP7.78□□□□□ -1.16
RFC3-202ENST00000434425 IRX6P78412 446 aaPredicted RBP7.78□□□□□ -1.16
RFC3-202ENST00000434425 KCNV2Q8TDN2 545 aa7.78□□□□□ -1.16
RFC3-202ENST00000434425 CCDC136Q96JN2 1154 aa7.78□□□□□ -1.16
RFC3-202ENST00000434425 MYT1LQ9UL68 1186 aa7.78□□□□□ -1.16
RFC3-202ENST00000434425 TMCO4Q5TGY1 634 aa7.77□□□□□ -1.17
RFC3-202ENST00000434425 TMED8Q6PL24 325 aaPredicted RBP7.77□□□□□ -1.17
RFC3-202ENST00000434425 FBXO22Q8NEZ5 403 aa7.77□□□□□ -1.17
RFC3-202ENST00000434425 ANO8Q9HCE9 1232 aaPredicted RBP7.77□□□□□ -1.17
RFC3-202ENST00000434425 E9PSI1 815 aa7.76□□□□□ -1.17
RFC3-202ENST00000434425 CABP2Q9NPB3 220 aa7.76□□□□□ -1.17
RFC3-202ENST00000434425 USP35Q9P2H5 1018 aa7.76□□□□□ -1.17
RFC3-202ENST00000434425 PHF8Q9UPP1 1060 aa7.76□□□□□ -1.17
RFC3-202ENST00000434425 MYO5CQ9NQX4 1742 aa7.76□□□□□ -1.17
RFC3-202ENST00000434425 APBB1O00213 710 aa7.75□□□□□ -1.17
RFC3-202ENST00000434425 CCDC125Q86Z20 511 aa7.75□□□□□ -1.17
RFC3-202ENST00000434425 EEA1Q15075 1411 aa7.75□□□□□ -1.17
RFC3-202ENST00000434425 UHRF1BP1Q6BDS2 1440 aa7.75□□□□□ -1.17
RFC3-202ENST00000434425 KIF14Q15058 1648 aa7.75□□□□□ -1.17
RFC3-202ENST00000434425 PCGF6Q9BYE7 350 aa7.75□□□□□ -1.17
RFC3-202ENST00000434425 PRDM16Q9HAZ2 1276 aa7.75□□□□□ -1.17
RFC3-202ENST00000434425 ZNF518AQ6AHZ1 1483 aa7.74□□□□□ -1.17
RFC3-202ENST00000434425 C3P01024 1663 aa7.74□□□□□ -1.17
RFC3-202ENST00000434425 PHF12Q96QT6 1004 aa7.74□□□□□ -1.17
RFC3-202ENST00000434425 PTPRTO14522 1441 aa7.73□□□□□ -1.17
RFC3-202ENST00000434425 PAK3O75914 559 aaPredicted RBP7.73□□□□□ -1.17
RFC3-202ENST00000434425 SETQ01105 290 aaPredicted RBP7.73□□□□□ -1.17
RFC3-202ENST00000434425 LMOD2Q6P5Q4 547 aa7.73□□□□□ -1.17
RFC3-202ENST00000434425 TEX2Q8IWB9 1127 aa7.73□□□□□ -1.17
RFC3-202ENST00000434425 ESF1Q9H501 851 aaKnown RBP7.73□□□□□ -1.17
RFC3-202ENST00000434425 ZRANB1Q9UGI0 708 aa7.73□□□□□ -1.17
RFC3-202ENST00000434425 ARHGAP5Q13017 1502 aa7.73□□□□□ -1.17
RFC3-202ENST00000434425 LTBP4Q8N2S1 1624 aa7.73□□□□□ -1.17
RFC3-202ENST00000434425 CDC42BPBQ9Y5S2 1711 aa7.72□□□□□ -1.17
RFC3-202ENST00000434425 NCLP19338 710 aaKnown RBP7.72□□□□□ -1.17
RFC3-202ENST00000434425 CCDC27Q2M243 656 aa7.72□□□□□ -1.17
RFC3-202ENST00000434425 WDR70Q9NW82 654 aa7.72□□□□□ -1.17
RFC3-202ENST00000434425 FMN1Q68DA7 1419 aa7.72□□□□□ -1.17
RFC3-202ENST00000434425 TRAPPC8Q9Y2L5 1435 aa7.72□□□□□ -1.17
RFC3-202ENST00000434425 KDM5CP41229 1560 aa7.72□□□□□ -1.17
RFC3-202ENST00000434425 DIP2CQ9Y2E4 1556 aa7.72□□□□□ -1.17
RFC3-202ENST00000434425 LRRIQ1Q96JM4 1722 aa7.72□□□□□ -1.17
RFC3-202ENST00000434425 ARHGAP35Q9NRY4 1499 aa7.71□□□□□ -1.18
RFC3-202ENST00000434425 MLH3Q9UHC1 1453 aa7.71□□□□□ -1.18
RFC3-202ENST00000434425 TROQ12816 1431 aaPredicted RBP7.71□□□□□ -1.18
RFC3-202ENST00000434425 TRPC6Q9Y210 931 aa7.71□□□□□ -1.18
RFC3-202ENST00000434425 ABCA6Q8N139 1617 aa7.7□□□□□ -1.18
RFC3-202ENST00000434425 NCKAP5LQ9HCH0 1330 aa7.7□□□□□ -1.18
RFC3-202ENST00000434425 MAMSTRQ6ZN01 415 aa7.7□□□□□ -1.18
RFC3-202ENST00000434425 MS4A4AQ96JQ5 239 aa7.7□□□□□ -1.18
RFC3-202ENST00000434425 SPATA31D1Q6ZQQ2 1576 aa7.7□□□□□ -1.18
RFC3-202ENST00000434425 PPM1GO15355 546 aaPredicted RBP7.69□□□□□ -1.18
RFC3-202ENST00000434425 CD44P16070 742 aaKnown RBP7.69□□□□□ -1.18
RFC3-202ENST00000434425 NLRP6P59044 892 aa7.69□□□□□ -1.18
RFC3-202ENST00000434425 SPNS2Q8IVW8 549 aa7.69□□□□□ -1.18
RFC3-202ENST00000434425 REREQ9P2R6 1566 aa7.69□□□□□ -1.18
RFC3-202ENST00000434425 NCOA1Q15788 1441 aa7.69□□□□□ -1.18
RFC3-202ENST00000434425 KIDINS220Q9ULH0 1771 aa7.69□□□□□ -1.18
RFC3-202ENST00000434425 ZMYM3Q14202 1370 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms