RNA–Protein interactions for RNA: ENST00000434073.1

PCDH9-AS3-201, PCDH9 antisense RNA 3, humanhuman

TSL 2 BASIC

Gene PCDH9-AS3, Length 479 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-AS3-201ENST00000434073 SLF2Q8IX21 1173 aa10.53□□□□□ -0.72
PCDH9-AS3-201ENST00000434073 HCSTQ9UBK5 93 aa10.53□□□□□ -0.72
PCDH9-AS3-201ENST00000434073 TSR3Q9UJK0 312 aaKnown RBP10.53□□□□□ -0.72
PCDH9-AS3-201ENST00000434073 AMHR2Q16671 573 aa10.52□□□□□ -0.73
PCDH9-AS3-201ENST00000434073 SLC24A3Q9HC58 644 aa10.52□□□□□ -0.73
PCDH9-AS3-201ENST00000434073 SLC4A3P48751 1232 aa10.51□□□□□ -0.73
PCDH9-AS3-201ENST00000434073 NLRP7Q8WX94 980 aa10.51□□□□□ -0.73
PCDH9-AS3-201ENST00000434073 NECTIN2Q92692 538 aa10.51□□□□□ -0.73
PCDH9-AS3-201ENST00000434073 DAXXQ9UER7 740 aaPredicted RBP10.51□□□□□ -0.73
PCDH9-AS3-201ENST00000434073 HPS5Q9UPZ3 1129 aa10.51□□□□□ -0.73
PCDH9-AS3-201ENST00000434073 TRIM66O15016 1216 aa10.5□□□□□ -0.73
PCDH9-AS3-201ENST00000434073 TPRNQ4KMQ1 711 aa10.5□□□□□ -0.73
PCDH9-AS3-201ENST00000434073 NYAP1Q6ZVC0 841 aa10.5□□□□□ -0.73
PCDH9-AS3-201ENST00000434073 TMUB1Q9BVT8 246 aa10.5□□□□□ -0.73
PCDH9-AS3-201ENST00000434073 CLCN1P35523 988 aa10.48□□□□□ -0.73
PCDH9-AS3-201ENST00000434073 PTPN5P54829 565 aa10.48□□□□□ -0.73
PCDH9-AS3-201ENST00000434073 WBP1LQ9NX94 342 aa10.48□□□□□ -0.73
PCDH9-AS3-201ENST00000434073 RNF40O75150 1001 aa10.47□□□□□ -0.73
PCDH9-AS3-201ENST00000434073 PPP4CP60510 307 aa10.47□□□□□ -0.73
PCDH9-AS3-201ENST00000434073 MDM2Q00987 491 aaPredicted RBP10.47□□□□□ -0.73
PCDH9-AS3-201ENST00000434073 GPCPD1Q9NPB8 672 aa10.47□□□□□ -0.73
PCDH9-AS3-201ENST00000434073 SULF1Q8IWU6 871 aa10.45□□□□□ -0.74
PCDH9-AS3-201ENST00000434073 SLC10A3P09131 477 aa10.44□□□□□ -0.74
PCDH9-AS3-201ENST00000434073 PARP9Q8IXQ6 854 aa10.43□□□□□ -0.74
PCDH9-AS3-201ENST00000434073 REPIN1Q9BWE0 567 aaKnown RBP10.43□□□□□ -0.74
PCDH9-AS3-201ENST00000434073 PDE4DQ08499 809 aa10.42□□□□□ -0.74
PCDH9-AS3-201ENST00000434073 RSPH4AQ5TD94 716 aa10.42□□□□□ -0.74
PCDH9-AS3-201ENST00000434073 FAM217BQ9NTX9 383 aaPredicted RBP10.42□□□□□ -0.74
PCDH9-AS3-201ENST00000434073 DDX11L8A8MPP1 907 aa10.41□□□□□ -0.74
PCDH9-AS3-201ENST00000434073 APLP1P51693 650 aa10.41□□□□□ -0.74
PCDH9-AS3-201ENST00000434073 TTLL12Q14166 644 aaPredicted RBP10.41□□□□□ -0.74
PCDH9-AS3-201ENST00000434073 PRR14Q9BWN1 585 aa10.41□□□□□ -0.74
PCDH9-AS3-201ENST00000434073 CFHP08603 1231 aa10.4□□□□□ -0.74
PCDH9-AS3-201ENST00000434073 CD46P15529 392 aa10.4□□□□□ -0.74
PCDH9-AS3-201ENST00000434073 GIGYF2Q6Y7W6 1299 aaKnown RBP10.4□□□□□ -0.74
PCDH9-AS3-201ENST00000434073 RDH13Q8NBN7 331 aa10.39□□□□□ -0.75
PCDH9-AS3-201ENST00000434073 KMT5BQ4FZB7 885 aa10.38□□□□□ -0.75
PCDH9-AS3-201ENST00000434073 ACTN4O43707 911 aaKnown RBP10.37□□□□□ -0.75
PCDH9-AS3-201ENST00000434073 GCGRP47871 477 aa10.37□□□□□ -0.75
PCDH9-AS3-201ENST00000434073 ITGBL1O95965 494 aaPredicted RBP10.35□□□□□ -0.75
PCDH9-AS3-201ENST00000434073 PRKCSHP14314 528 aaPredicted RBP10.35□□□□□ -0.75
PCDH9-AS3-201ENST00000434073 SSTR3P32745 418 aaPredicted RBP10.35□□□□□ -0.75
PCDH9-AS3-201ENST00000434073 MS4A1P11836 297 aa10.33□□□□□ -0.76
PCDH9-AS3-201ENST00000434073 TJAP1Q5JTD0 557 aa10.31□□□□□ -0.76
PCDH9-AS3-201ENST00000434073 IFFO2Q5TF58 517 aa10.31□□□□□ -0.76
PCDH9-AS3-201ENST00000434073 PCDHB3Q9Y5E6 796 aa10.31□□□□□ -0.76
PCDH9-AS3-201ENST00000434073 MTRQ99707 1265 aa10.3□□□□□ -0.76
PCDH9-AS3-201ENST00000434073 KDM4AO75164 1064 aa10.29□□□□□ -0.76
PCDH9-AS3-201ENST00000434073 USP46P62068 366 aa10.29□□□□□ -0.76
PCDH9-AS3-201ENST00000434073 FUT2Q10981 343 aa10.29□□□□□ -0.76
PCDH9-AS3-201ENST00000434073 GPBP1L1Q9HC44 474 aaPredicted RBP10.29□□□□□ -0.76
PCDH9-AS3-201ENST00000434073 KDM4CQ9H3R0 1056 aa10.28□□□□□ -0.76
PCDH9-AS3-201ENST00000434073 IL21Q9HBE4 155 aa10.28□□□□□ -0.76
PCDH9-AS3-201ENST00000434073 ATP6V1AP38606 617 aa10.27□□□□□ -0.77
PCDH9-AS3-201ENST00000434073 BLOC1S3Q6QNY0 202 aa10.27□□□□□ -0.77
PCDH9-AS3-201ENST00000434073 BEGAINQ9BUH8 593 aa10.27□□□□□ -0.77
PCDH9-AS3-201ENST00000434073 PLA2G2EQ9NZK7 142 aa10.27□□□□□ -0.77
PCDH9-AS3-201ENST00000434073 BRPF1P55201 1214 aaPredicted RBP10.26□□□□□ -0.77
PCDH9-AS3-201ENST00000434073 KCNC4Q03721 635 aa10.26□□□□□ -0.77
PCDH9-AS3-201ENST00000434073 MORN1Q5T089 497 aa10.26□□□□□ -0.77
PCDH9-AS3-201ENST00000434073 HOXA2O43364 376 aa10.25□□□□□ -0.77
PCDH9-AS3-201ENST00000434073 COPS2P61201 443 aa10.25□□□□□ -0.77
PCDH9-AS3-201ENST00000434073 GRIPAP1Q4V328 841 aa10.25□□□□□ -0.77
PCDH9-AS3-201ENST00000434073 ZPR1O75312 459 aa10.24□□□□□ -0.77
PCDH9-AS3-201ENST00000434073 NR1I2O75469 434 aa10.24□□□□□ -0.77
PCDH9-AS3-201ENST00000434073 NUTM1Q86Y26 1132 aa10.24□□□□□ -0.77
PCDH9-AS3-201ENST00000434073 SPIRE2Q8WWL2 714 aa10.24□□□□□ -0.77
PCDH9-AS3-201ENST00000434073 DIXDC1Q155Q3 683 aa10.23□□□□□ -0.77
PCDH9-AS3-201ENST00000434073 NEUROD2Q15784 382 aa10.23□□□□□ -0.77
PCDH9-AS3-201ENST00000434073 PUS10Q3MIT2 529 aaKnown RBP10.23□□□□□ -0.77
PCDH9-AS3-201ENST00000434073 ZNF516Q92618 1163 aa10.22□□□□□ -0.77
PCDH9-AS3-201ENST00000434073 DDRGK1Q96HY6 314 aa10.21□□□□□ -0.77
PCDH9-AS3-201ENST00000434073 SCUBE3Q8IX30 993 aa10.2□□□□□ -0.78
PCDH9-AS3-201ENST00000434073 TBC1D2Q9BYX2 928 aa10.2□□□□□ -0.78
PCDH9-AS3-201ENST00000434073 SLC27A5Q9Y2P5 690 aa10.2□□□□□ -0.78
PCDH9-AS3-201ENST00000434073 SALL2Q9Y467 1007 aaPredicted RBP10.2□□□□□ -0.78
PCDH9-AS3-201ENST00000434073 GJA5P36382 358 aa10.19□□□□□ -0.78
PCDH9-AS3-201ENST00000434073 FAM117AQ9C073 453 aa10.19□□□□□ -0.78
PCDH9-AS3-201ENST00000434073 HLA-CQ95604 372 aa10.18□□□□□ -0.78
PCDH9-AS3-201ENST00000434073 THAP11Q96EK4 314 aa10.18□□□□□ -0.78
PCDH9-AS3-201ENST00000434073 PLEKHG3A1L390 1219 aa10.17□□□□□ -0.78
PCDH9-AS3-201ENST00000434073 MOXD2PA6NHM9 499 aa10.17□□□□□ -0.78
PCDH9-AS3-201ENST00000434073 TLL1O43897 1013 aa10.17□□□□□ -0.78
PCDH9-AS3-201ENST00000434073 ADH1BP00325 375 aa10.16□□□□□ -0.78
PCDH9-AS3-201ENST00000434073 Q3C1V9 767 aa10.16□□□□□ -0.78
PCDH9-AS3-201ENST00000434073 MYSM1Q5VVJ2 828 aa10.16□□□□□ -0.78
PCDH9-AS3-201ENST00000434073 A0A0G2JS52 829 aa10.15□□□□□ -0.78
PCDH9-AS3-201ENST00000434073 FDX1P10109 184 aa10.15□□□□□ -0.78
PCDH9-AS3-201ENST00000434073 GUCA2AQ02747 115 aa10.15□□□□□ -0.78
PCDH9-AS3-201ENST00000434073 RSBN1LQ6PCB5 846 aaPredicted RBP10.15□□□□□ -0.78
PCDH9-AS3-201ENST00000434073 BRICD5Q6PL45 260 aa10.15□□□□□ -0.78
PCDH9-AS3-201ENST00000434073 NKX2-3Q8TAU0 364 aa10.15□□□□□ -0.78
PCDH9-AS3-201ENST00000434073 RSPH6AQ9H0K4 717 aa10.15□□□□□ -0.78
PCDH9-AS3-201ENST00000434073 SPTLC1O15269 473 aa10.14□□□□□ -0.79
PCDH9-AS3-201ENST00000434073 FMNL1O95466 1100 aaPredicted RBP10.14□□□□□ -0.79
PCDH9-AS3-201ENST00000434073 PCDHGC3Q9UN70 934 aa10.14□□□□□ -0.79
PCDH9-AS3-201ENST00000434073 NDUFV2P19404 249 aa10.13□□□□□ -0.79
PCDH9-AS3-201ENST00000434073 TUSC1Q2TAM9 212 aa10.13□□□□□ -0.79
PCDH9-AS3-201ENST00000434073 RNF19BQ6ZMZ0 732 aa10.13□□□□□ -0.79
PCDH9-AS3-201ENST00000434073 SPSB2Q99619 263 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms