RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 NUDCQ9Y266 331 aa23■■□□□ 1.27
CTSD-204ENST00000433655 SYNMO15061 1565 aa22.99■■□□□ 1.27
CTSD-204ENST00000433655 ADGRB3O60242 1522 aa22.99■■□□□ 1.27
CTSD-204ENST00000433655 NRXN1Q9ULB1 1477 aa22.98■■□□□ 1.27
CTSD-204ENST00000433655 SENP3-EIF4A1A0A087X0R7 540 aa22.97■■□□□ 1.27
CTSD-204ENST00000433655 NEO1Q92859 1461 aa22.96■■□□□ 1.27
CTSD-204ENST00000433655 NPATQ14207 1427 aa22.95■■□□□ 1.26
CTSD-204ENST00000433655 RNF123Q5XPI4 1314 aa22.95■■□□□ 1.26
CTSD-204ENST00000433655 CC2D1BQ5T0F9 858 aaKnown RBP22.95■■□□□ 1.26
CTSD-204ENST00000433655 PPP4R2Q9NY27 417 aa22.94■■□□□ 1.26
CTSD-204ENST00000433655 ADGRF5Q8IZF2 1346 aa22.94■■□□□ 1.26
CTSD-204ENST00000433655 ABCC3O15438 1527 aa22.93■■□□□ 1.26
CTSD-204ENST00000433655 KDM5AP29375 1690 aaKnown RBP22.93■■□□□ 1.26
CTSD-204ENST00000433655 PPLO60437 1756 aa22.93■■□□□ 1.26
CTSD-204ENST00000433655 DIP2CQ9Y2E4 1556 aa22.92■■□□□ 1.26
CTSD-204ENST00000433655 RICTORQ6R327 1708 aa22.92■■□□□ 1.26
CTSD-204ENST00000433655 CAMSAP1Q5T5Y3 1602 aa22.91■■□□□ 1.26
CTSD-204ENST00000433655 MYO3AQ8NEV4 1616 aa22.91■■□□□ 1.26
CTSD-204ENST00000433655 EIF3AQ14152 1382 aaKnown RBP22.91■■□□□ 1.26
CTSD-204ENST00000433655 CFAP65Q6ZU64 1925 aaKnown RBP22.91■■□□□ 1.26
CTSD-204ENST00000433655 SIGLEC1Q9BZZ2 1709 aa22.91■■□□□ 1.26
CTSD-204ENST00000433655 ZMYM4Q5VZL5 1548 aa22.9■■□□□ 1.26
CTSD-204ENST00000433655 CFAP70Q5T0N1 1121 aa22.9■■□□□ 1.26
CTSD-204ENST00000433655 BLMP54132 1417 aaPredicted RBP22.88■■□□□ 1.25
CTSD-204ENST00000433655 INSRP06213 1382 aa22.88■■□□□ 1.25
CTSD-204ENST00000433655 ERVK-7P63135 1459 aa22.88■■□□□ 1.25
CTSD-204ENST00000433655 NOS1P29475 1434 aa22.87■■□□□ 1.25
CTSD-204ENST00000433655 SETBP1Q9Y6X0 1596 aa22.87■■□□□ 1.25
CTSD-204ENST00000433655 CDCA8Q53HL2 280 aa22.86■■□□□ 1.25
CTSD-204ENST00000433655 GGT6Q6P531 493 aa22.85■■□□□ 1.25
CTSD-204ENST00000433655 PIK3C2BO00750 1634 aa22.85■■□□□ 1.25
CTSD-204ENST00000433655 ASXL1Q8IXJ9 1541 aa22.85■■□□□ 1.25
CTSD-204ENST00000433655 RAPGEF3O95398 923 aa22.84■■□□□ 1.25
CTSD-204ENST00000433655 AMER1Q5JTC6 1135 aaPredicted RBP22.84■■□□□ 1.25
CTSD-204ENST00000433655 ZC3H13Q5T200 1668 aaKnown RBP22.83■■□□□ 1.24
CTSD-204ENST00000433655 PIK3C2GO75747 1445 aa22.83■■□□□ 1.24
CTSD-204ENST00000433655 RBM19Q9Y4C8 960 aaKnown RBP22.82■■□□□ 1.24
CTSD-204ENST00000433655 B4GALNT3Q6L9W6 998 aa22.81■■□□□ 1.24
CTSD-204ENST00000433655 ADGRB1O14514 1584 aa22.8■■□□□ 1.24
CTSD-204ENST00000433655 GLI2P10070 1586 aa22.8■■□□□ 1.24
CTSD-204ENST00000433655 KNSTRNQ9Y448 316 aa22.8■■□□□ 1.24
CTSD-204ENST00000433655 NPC1L1Q9UHC9 1359 aa22.79■■□□□ 1.24
CTSD-204ENST00000433655 SBNO2Q9Y2G9 1366 aa22.78■■□□□ 1.24
CTSD-204ENST00000433655 PPP2R1AP30153 589 aa22.78■■□□□ 1.24
CTSD-204ENST00000433655 QRICH2Q9H0J4 1663 aa22.77■■□□□ 1.23
CTSD-204ENST00000433655 YEATS2Q9ULM3 1422 aa22.76■■□□□ 1.23
CTSD-204ENST00000433655 CHGAP10645 457 aaKnown RBP22.75■■□□□ 1.23
CTSD-204ENST00000433655 PDE3BQ13370 1112 aa22.75■■□□□ 1.23
CTSD-204ENST00000433655 SALL2Q9Y467 1007 aaPredicted RBP22.74■■□□□ 1.23
CTSD-204ENST00000433655 NEXMIFQ5QGS0 1516 aa22.74■■□□□ 1.23
CTSD-204ENST00000433655 ARHGAP31Q2M1Z3 1444 aa22.74■■□□□ 1.23
CTSD-204ENST00000433655 C14orf93Q9H972 538 aaKnown RBP22.73■■□□□ 1.23
CTSD-204ENST00000433655 RPGRIP1LQ68CZ1 1315 aa22.72■■□□□ 1.23
CTSD-204ENST00000433655 SLC24A1O60721 1099 aa22.72■■□□□ 1.23
CTSD-204ENST00000433655 RIMBP3CA6NJZ7 1639 aa22.71■■□□□ 1.23
CTSD-204ENST00000433655 RIMBP3BA6NNM3 1639 aa22.71■■□□□ 1.23
CTSD-204ENST00000433655 RIMBP3Q9UFD9 1639 aa22.71■■□□□ 1.23
CTSD-204ENST00000433655 CDCA7LQ96GN5 454 aa22.7■■□□□ 1.23
CTSD-204ENST00000433655 DNAJC5Q9H3Z4 198 aa22.7■■□□□ 1.23
CTSD-204ENST00000433655 ADAMTS8Q9UP79 889 aa22.7■■□□□ 1.22
CTSD-204ENST00000433655 CENPJQ9HC77 1338 aaPredicted RBP22.69■■□□□ 1.22
CTSD-204ENST00000433655 CARD14Q9BXL6 1004 aa22.69■■□□□ 1.22
CTSD-204ENST00000433655 DIP2BQ9P265 1576 aa22.68■■□□□ 1.22
CTSD-204ENST00000433655 RRP1P56182 461 aaKnown RBP22.68■■□□□ 1.22
CTSD-204ENST00000433655 ARHGEF28Q8N1W1 1705 aaKnown RBP22.68■■□□□ 1.22
CTSD-204ENST00000433655 MYO5BQ9ULV0 1848 aa22.68■■□□□ 1.22
CTSD-204ENST00000433655 PREX1Q8TCU6 1659 aa22.67■■□□□ 1.22
CTSD-204ENST00000433655 RCAN3Q9UKA8 241 aa22.67■■□□□ 1.22
CTSD-204ENST00000433655 CYB5RLQ6IPT4 315 aa22.66■■□□□ 1.22
CTSD-204ENST00000433655 TRAK1Q9UPV9 953 aa22.65■■□□□ 1.22
CTSD-204ENST00000433655 TMEM132EQ6IEE7 984 aa22.64■■□□□ 1.21
CTSD-204ENST00000433655 TMEM131LA2VDJ0 1609 aa22.62■■□□□ 1.21
CTSD-204ENST00000433655 PLEKHH1Q9ULM0 1364 aa22.62■■□□□ 1.21
CTSD-204ENST00000433655 WDR43Q15061 677 aaKnown RBP eCLIP22.6■■□□□ 1.21
CTSD-204ENST00000433655 IDI1Q13907 227 aa22.6■■□□□ 1.21
CTSD-204ENST00000433655 TULP4Q9NRJ4 1543 aa22.59■■□□□ 1.21
CTSD-204ENST00000433655 USP32Q8NFA0 1604 aa22.59■■□□□ 1.21
CTSD-204ENST00000433655 CCDC136Q96JN2 1154 aa22.59■■□□□ 1.21
CTSD-204ENST00000433655 TSPOAP1O95153 1857 aa22.59■■□□□ 1.21
CTSD-204ENST00000433655 ZFYVE9O95405 1425 aa22.58■■□□□ 1.21
CTSD-204ENST00000433655 NUTM2DQ5VT03 806 aaPredicted RBP22.58■■□□□ 1.21
CTSD-204ENST00000433655 ZNF521Q96K83 1311 aa22.58■■□□□ 1.21
CTSD-204ENST00000433655 VGFO15240 615 aaPredicted RBP22.57■■□□□ 1.2
CTSD-204ENST00000433655 NSD3Q9BZ95 1437 aa22.56■■□□□ 1.2
CTSD-204ENST00000433655 REREQ9P2R6 1566 aa22.56■■□□□ 1.2
CTSD-204ENST00000433655 EXOC6Q8TAG9 804 aa22.55■■□□□ 1.2
CTSD-204ENST00000433655 SHPRHQ149N8 1683 aa22.54■■□□□ 1.2
CTSD-204ENST00000433655 FAM69CQ0P6D2 419 aa22.54■■□□□ 1.2
CTSD-204ENST00000433655 SLC52A1Q9NWF4 448 aa22.54■■□□□ 1.2
CTSD-204ENST00000433655 SLC12A5Q9H2X9 1139 aa22.53■■□□□ 1.2
CTSD-204ENST00000433655 FANCIQ9NVI1 1328 aa22.53■■□□□ 1.2
CTSD-204ENST00000433655 AGLP35573 1532 aa22.5■■□□□ 1.19
CTSD-204ENST00000433655 DUSP27Q5VZP5 1158 aa22.5■■□□□ 1.19
CTSD-204ENST00000433655 POLR3AO14802 1390 aaPredicted RBP22.5■■□□□ 1.19
CTSD-204ENST00000433655 CCDC146Q8IYE0 955 aa22.48■■□□□ 1.19
CTSD-204ENST00000433655 PUS7Q96PZ0 661 aaKnown RBP22.48■■□□□ 1.19
CTSD-204ENST00000433655 CLTCQ00610 1675 aaKnown RBP22.47■■□□□ 1.19
CTSD-204ENST00000433655 MSH5O43196 834 aa22.47■■□□□ 1.19
CTSD-204ENST00000433655 PTPRMP28827 1452 aa22.47■■□□□ 1.19
CTSD-204ENST00000433655 PLIN1O60240 522 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms