RNA–Protein interactions for RNA: ENST00000428816.1

BRWD1P3-201, Transcript of bromodomain and WD repeat domain containing 1 pseudogene 3, humanhuman

BASIC

Gene BRWD1P3, Length 390 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1P3-201ENST00000428816 GGT6Q6P531 493 aa9.63□□□□□ -0.87
BRWD1P3-201ENST00000428816 ZNF579Q8NAF0 562 aaKnown RBP9.63□□□□□ -0.87
BRWD1P3-201ENST00000428816 SLAIN2Q9P270 581 aa9.63□□□□□ -0.87
BRWD1P3-201ENST00000428816 PLXNC1O60486 1568 aa9.63□□□□□ -0.87
BRWD1P3-201ENST00000428816 PZPP20742 1482 aa9.62□□□□□ -0.87
BRWD1P3-201ENST00000428816 C1QTNF8P60827 252 aa9.62□□□□□ -0.87
BRWD1P3-201ENST00000428816 MIA2Q96PC5 1412 aa9.62□□□□□ -0.87
BRWD1P3-201ENST00000428816 SLC34A2O95436 690 aa9.61□□□□□ -0.87
BRWD1P3-201ENST00000428816 FBXO31Q5XUX0 539 aaPredicted RBP9.61□□□□□ -0.87
BRWD1P3-201ENST00000428816 BCL9LQ86UU0 1499 aa9.6□□□□□ -0.87
BRWD1P3-201ENST00000428816 MIER1Q8N108 512 aa9.6□□□□□ -0.87
BRWD1P3-201ENST00000428816 BLMP54132 1417 aaPredicted RBP9.59□□□□□ -0.87
BRWD1P3-201ENST00000428816 ABCC3O15438 1527 aa9.59□□□□□ -0.87
BRWD1P3-201ENST00000428816 MSH6P52701 1360 aa9.59□□□□□ -0.87
BRWD1P3-201ENST00000428816 AHDC1Q5TGY3 1603 aaPredicted RBP9.59□□□□□ -0.87
BRWD1P3-201ENST00000428816 A2MP01023 1474 aa9.59□□□□□ -0.87
BRWD1P3-201ENST00000428816 SCAF11Q99590 1463 aaKnown RBP9.58□□□□□ -0.88
BRWD1P3-201ENST00000428816 TIAM1Q13009 1591 aa9.58□□□□□ -0.88
BRWD1P3-201ENST00000428816 ZNF784Q8NCA9 323 aaPredicted RBP9.57□□□□□ -0.88
BRWD1P3-201ENST00000428816 C8orf37Q96NL8 207 aa9.57□□□□□ -0.88
BRWD1P3-201ENST00000428816 SAMD9LQ8IVG5 1584 aa9.57□□□□□ -0.88
BRWD1P3-201ENST00000428816 PRDM15P57071 1507 aaPredicted RBP9.56□□□□□ -0.88
BRWD1P3-201ENST00000428816 PRXQ9BXM0 1461 aa9.56□□□□□ -0.88
BRWD1P3-201ENST00000428816 POTEIP0CG38 1075 aa9.56□□□□□ -0.88
BRWD1P3-201ENST00000428816 KCNA6P17658 529 aa9.56□□□□□ -0.88
BRWD1P3-201ENST00000428816 CLCN6P51797 869 aa9.56□□□□□ -0.88
BRWD1P3-201ENST00000428816 PROSER2Q86WR7 435 aaPredicted RBP9.56□□□□□ -0.88
BRWD1P3-201ENST00000428816 PCDH10Q9P2E7 1040 aa9.56□□□□□ -0.88
BRWD1P3-201ENST00000428816 SPAG9O60271 1321 aaKnown RBP9.56□□□□□ -0.88
BRWD1P3-201ENST00000428816 DIP2AQ14689 1571 aa9.55□□□□□ -0.88
BRWD1P3-201ENST00000428816 CEP350Q5VT06 3117 aa9.55□□□□□ -0.88
BRWD1P3-201ENST00000428816 PSDA5PKW4 1024 aaPredicted RBP9.55□□□□□ -0.88
BRWD1P3-201ENST00000428816 DEFB132Q7Z7B7 95 aa9.54□□□□□ -0.88
BRWD1P3-201ENST00000428816 PHF12Q96QT6 1004 aa9.54□□□□□ -0.88
BRWD1P3-201ENST00000428816 NKTRP30414 1462 aaKnown RBP9.53□□□□□ -0.88
BRWD1P3-201ENST00000428816 PAK3O75914 559 aaPredicted RBP9.53□□□□□ -0.88
BRWD1P3-201ENST00000428816 TRPC5Q9UL62 973 aaPredicted RBP9.53□□□□□ -0.88
BRWD1P3-201ENST00000428816 CDK11AQ9UQ88 783 aaPredicted RBP9.53□□□□□ -0.88
BRWD1P3-201ENST00000428816 CDC42BPBQ9Y5S2 1711 aa9.53□□□□□ -0.88
BRWD1P3-201ENST00000428816 GALR2O43603 387 aaPredicted RBP9.52□□□□□ -0.89
BRWD1P3-201ENST00000428816 SF3B2Q13435 895 aaKnown RBP9.52□□□□□ -0.89
BRWD1P3-201ENST00000428816 PLCD3Q8N3E9 789 aa9.52□□□□□ -0.89
BRWD1P3-201ENST00000428816 ARHGAP23Q9P227 1491 aa9.52□□□□□ -0.89
BRWD1P3-201ENST00000428816 PLEKHG5O94827 1062 aa9.51□□□□□ -0.89
BRWD1P3-201ENST00000428816 LTKP29376 864 aa9.51□□□□□ -0.89
BRWD1P3-201ENST00000428816 TROQ12816 1431 aaPredicted RBP9.5□□□□□ -0.89
BRWD1P3-201ENST00000428816 PREX2Q70Z35 1606 aa9.5□□□□□ -0.89
BRWD1P3-201ENST00000428816 TXNDC2Q86VQ3 553 aa9.5□□□□□ -0.89
BRWD1P3-201ENST00000428816 SLIT1O75093 1534 aa9.5□□□□□ -0.89
BRWD1P3-201ENST00000428816 CLIP1P30622 1438 aa9.49□□□□□ -0.89
BRWD1P3-201ENST00000428816 SETD5Q9C0A6 1442 aa9.49□□□□□ -0.89
BRWD1P3-201ENST00000428816 KDM5AP29375 1690 aaKnown RBP9.49□□□□□ -0.89
BRWD1P3-201ENST00000428816 NCOA2Q15596 1464 aa9.49□□□□□ -0.89
BRWD1P3-201ENST00000428816 RASEFQ8IZ41 740 aa9.49□□□□□ -0.89
BRWD1P3-201ENST00000428816 TSPYL2Q9H2G4 693 aaPredicted RBP9.49□□□□□ -0.89
BRWD1P3-201ENST00000428816 CCDC61Q9Y6R9 512 aa9.49□□□□□ -0.89
BRWD1P3-201ENST00000428816 INO80Q9ULG1 1556 aaPredicted RBP9.49□□□□□ -0.89
BRWD1P3-201ENST00000428816 ATRNO75882 1429 aa9.48□□□□□ -0.89
BRWD1P3-201ENST00000428816 USP21Q9UK80 565 aa9.48□□□□□ -0.89
BRWD1P3-201ENST00000428816 FBXO3Q9UK99 471 aa9.48□□□□□ -0.89
BRWD1P3-201ENST00000428816 EID1Q9Y6B2 187 aa9.47□□□□□ -0.89
BRWD1P3-201ENST00000428816 UNC13BO14795 1591 aa9.46□□□□□ -0.89
BRWD1P3-201ENST00000428816 NUBP1P53384 320 aa9.46□□□□□ -0.9
BRWD1P3-201ENST00000428816 WASHC2CQ9Y4E1 1318 aa9.46□□□□□ -0.9
BRWD1P3-201ENST00000428816 NCOA3Q9Y6Q9 1424 aa9.46□□□□□ -0.9
BRWD1P3-201ENST00000428816 ADGBQ8N7X0 1667 aa9.45□□□□□ -0.9
BRWD1P3-201ENST00000428816 UBR1Q8IWV7 1749 aa9.45□□□□□ -0.9
BRWD1P3-201ENST00000428816 SUPT5HO00267 1087 aaKnown RBP9.45□□□□□ -0.9
BRWD1P3-201ENST00000428816 FNBP4Q8N3X1 1017 aaPredicted RBP9.45□□□□□ -0.9
BRWD1P3-201ENST00000428816 RTEL1-TNFRSF6BF6WH68 1400 aa9.45□□□□□ -0.9
BRWD1P3-201ENST00000428816 CADPS2Q86UW7 1296 aa9.44□□□□□ -0.9
BRWD1P3-201ENST00000428816 LRRC59Q96AG4 307 aaKnown RBP9.44□□□□□ -0.9
BRWD1P3-201ENST00000428816 NINLQ9Y2I6 1382 aa9.44□□□□□ -0.9
BRWD1P3-201ENST00000428816 SYCP2Q9BX26 1530 aa9.44□□□□□ -0.9
BRWD1P3-201ENST00000428816 DHX29Q7Z478 1369 aaKnown RBP9.43□□□□□ -0.9
BRWD1P3-201ENST00000428816 PNPLA6Q8IY17 1366 aa9.43□□□□□ -0.9
BRWD1P3-201ENST00000428816 R3HDM1Q15032 1099 aaKnown RBP9.43□□□□□ -0.9
BRWD1P3-201ENST00000428816 BRINP3Q76B58 766 aa9.43□□□□□ -0.9
BRWD1P3-201ENST00000428816 MS4A3Q96HJ5 214 aa9.43□□□□□ -0.9
BRWD1P3-201ENST00000428816 UTRNP46939 3433 aa9.43□□□□□ -0.9
BRWD1P3-201ENST00000428816 MROH1Q8NDA8 1641 aa9.42□□□□□ -0.9
BRWD1P3-201ENST00000428816 KIAA1107Q9UPP5 1409 aa9.42□□□□□ -0.9
BRWD1P3-201ENST00000428816 BAG6P46379 1132 aa9.42□□□□□ -0.9
BRWD1P3-201ENST00000428816 DCBLD2Q96PD2 775 aa9.42□□□□□ -0.9
BRWD1P3-201ENST00000428816 ZBTB47Q9UFB7 747 aaPredicted RBP9.42□□□□□ -0.9
BRWD1P3-201ENST00000428816 MAST1Q9Y2H9 1570 aa9.41□□□□□ -0.9
BRWD1P3-201ENST00000428816 ERVK-7P63135 1459 aa9.41□□□□□ -0.9
BRWD1P3-201ENST00000428816 ADAMTS2O95450 1211 aa9.41□□□□□ -0.9
BRWD1P3-201ENST00000428816 HNRNPMP52272 730 aaKnown RBP eCLIP9.41□□□□□ -0.9
BRWD1P3-201ENST00000428816 KIF12Q96FN5 646 aa9.41□□□□□ -0.9
BRWD1P3-201ENST00000428816 TET3O43151 1660 aa9.4□□□□□ -0.9
BRWD1P3-201ENST00000428816 GIGYF1O75420 1035 aaPredicted RBP9.4□□□□□ -0.9
BRWD1P3-201ENST00000428816 VASPP50552 380 aaPredicted RBP9.4□□□□□ -0.9
BRWD1P3-201ENST00000428816 SPHKAPQ2M3C7 1700 aa9.39□□□□□ -0.91
BRWD1P3-201ENST00000428816 TMEM2Q9UHN6 1383 aa9.39□□□□□ -0.91
BRWD1P3-201ENST00000428816 KIF3BO15066 747 aa9.39□□□□□ -0.91
BRWD1P3-201ENST00000428816 ATF3P18847 181 aa9.39□□□□□ -0.91
BRWD1P3-201ENST00000428816 GJD4Q96KN9 370 aaPredicted RBP9.39□□□□□ -0.91
BRWD1P3-201ENST00000428816 GPATCH8Q9UKJ3 1502 aaKnown RBP9.39□□□□□ -0.91
BRWD1P3-201ENST00000428816 CAMSAP2Q08AD1 1489 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms