RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 SLFN5Q08AF3 891 aa20.56■□□□□ 0.88
GHDC-203ENST00000428494 DDRGK1Q96HY6 314 aa20.56■□□□□ 0.88
GHDC-203ENST00000428494 RNF17Q9BXT8 1623 aaKnown RBP20.56■□□□□ 0.88
GHDC-203ENST00000428494 APAF1O14727 1248 aa20.55■□□□□ 0.88
GHDC-203ENST00000428494 RTN4Q9NQC3 1192 aaKnown RBP20.55■□□□□ 0.88
GHDC-203ENST00000428494 C8orf34Q49A92 452 aa20.55■□□□□ 0.88
GHDC-203ENST00000428494 BCAR3O75815 825 aa20.54■□□□□ 0.88
GHDC-203ENST00000428494 AFAP1Q8N556 730 aa20.54■□□□□ 0.88
GHDC-203ENST00000428494 TRAPPC8Q9Y2L5 1435 aa20.53■□□□□ 0.88
GHDC-203ENST00000428494 ERCC6L2Q5T890 1561 aa20.53■□□□□ 0.88
GHDC-203ENST00000428494 EFCAB2Q5VUJ9 269 aa20.52■□□□□ 0.88
GHDC-203ENST00000428494 DMRT2Q9Y5R5 561 aa20.52■□□□□ 0.88
GHDC-203ENST00000428494 MADDQ8WXG6 1647 aa20.52■□□□□ 0.88
GHDC-203ENST00000428494 FAM161AQ3B820 660 aa20.52■□□□□ 0.87
GHDC-203ENST00000428494 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.51■□□□□ 0.87
GHDC-203ENST00000428494 NFKBIBQ15653 356 aa20.51■□□□□ 0.87
GHDC-203ENST00000428494 CDCA8Q53HL2 280 aa20.51■□□□□ 0.87
GHDC-203ENST00000428494 ASXL1Q8IXJ9 1541 aa20.5■□□□□ 0.87
GHDC-203ENST00000428494 TRMT2AQ8IZ69 625 aaKnown RBP20.5■□□□□ 0.87
GHDC-203ENST00000428494 IQGAP1P46940 1657 aa20.49■□□□□ 0.87
GHDC-203ENST00000428494 SCAF11Q99590 1463 aaKnown RBP20.49■□□□□ 0.87
GHDC-203ENST00000428494 PLCH2O75038 1416 aa20.48■□□□□ 0.87
GHDC-203ENST00000428494 DAXXQ9UER7 740 aaPredicted RBP20.48■□□□□ 0.87
GHDC-203ENST00000428494 SPAG9O60271 1321 aaKnown RBP20.47■□□□□ 0.87
GHDC-203ENST00000428494 CFAP70Q5T0N1 1121 aa20.47■□□□□ 0.87
GHDC-203ENST00000428494 PIK3C2GO75747 1445 aa20.46■□□□□ 0.87
GHDC-203ENST00000428494 CARD14Q9BXL6 1004 aa20.46■□□□□ 0.87
GHDC-203ENST00000428494 SYNMO15061 1565 aa20.45■□□□□ 0.87
GHDC-203ENST00000428494 ABCC2Q92887 1545 aa20.45■□□□□ 0.86
GHDC-203ENST00000428494 CHD1O14646 1710 aa20.45■□□□□ 0.86
GHDC-203ENST00000428494 IGHDP01880 384 aa20.45■□□□□ 0.86
GHDC-203ENST00000428494 DNAJC5Q9H3Z4 198 aa20.45■□□□□ 0.86
GHDC-203ENST00000428494 MYOM1P52179 1685 aa20.43■□□□□ 0.86
GHDC-203ENST00000428494 GSE1Q14687 1217 aa20.42■□□□□ 0.86
GHDC-203ENST00000428494 CLTCL1P53675 1640 aa20.42■□□□□ 0.86
GHDC-203ENST00000428494 NKTRP30414 1462 aaKnown RBP20.42■□□□□ 0.86
GHDC-203ENST00000428494 SCAPERQ9BY12 1400 aa20.42■□□□□ 0.86
GHDC-203ENST00000428494 SPHKAPQ2M3C7 1700 aa20.41■□□□□ 0.86
GHDC-203ENST00000428494 UBE2Q2Q8WVN8 375 aa20.41■□□□□ 0.86
GHDC-203ENST00000428494 TRPM2O94759 1503 aa20.41■□□□□ 0.86
GHDC-203ENST00000428494 E9PSI1 815 aa20.4■□□□□ 0.86
GHDC-203ENST00000428494 ABCC1P33527 1531 aa20.4■□□□□ 0.86
GHDC-203ENST00000428494 ADGRF5Q8IZF2 1346 aa20.4■□□□□ 0.86
GHDC-203ENST00000428494 PTPRTO14522 1441 aa20.39■□□□□ 0.86
GHDC-203ENST00000428494 NPC1L1Q9UHC9 1359 aa20.39■□□□□ 0.85
GHDC-203ENST00000428494 CLASP1Q7Z460 1538 aa20.39■□□□□ 0.85
GHDC-203ENST00000428494 NEUROD2Q15784 382 aa20.39■□□□□ 0.85
GHDC-203ENST00000428494 PANK1Q8TE04 598 aa20.39■□□□□ 0.85
GHDC-203ENST00000428494 BRPF3Q9ULD4 1205 aa20.39■□□□□ 0.85
GHDC-203ENST00000428494 TNNT2P45379 298 aaPredicted RBP20.38■□□□□ 0.85
GHDC-203ENST00000428494 FRAT1Q92837 279 aaPredicted RBP20.38■□□□□ 0.85
GHDC-203ENST00000428494 KIF3BO15066 747 aa20.38■□□□□ 0.85
GHDC-203ENST00000428494 FRAT2O75474 233 aaPredicted RBP20.37■□□□□ 0.85
GHDC-203ENST00000428494 COG6Q9Y2V7 657 aa20.37■□□□□ 0.85
GHDC-203ENST00000428494 CEP152O94986 1710 aa20.37■□□□□ 0.85
GHDC-203ENST00000428494 EIF3AQ14152 1382 aaKnown RBP20.37■□□□□ 0.85
GHDC-203ENST00000428494 SHROOM2Q13796 1616 aa20.37■□□□□ 0.85
GHDC-203ENST00000428494 RRP7AQ9Y3A4 280 aaKnown RBP20.36■□□□□ 0.85
GHDC-203ENST00000428494 SEC24BO95487 1268 aa20.35■□□□□ 0.85
GHDC-203ENST00000428494 WWC1Q8IX03 1113 aa20.35■□□□□ 0.85
GHDC-203ENST00000428494 STAC3Q96MF2 364 aa20.35■□□□□ 0.85
GHDC-203ENST00000428494 ERVK-7P63135 1459 aa20.35■□□□□ 0.85
GHDC-203ENST00000428494 UGGT1Q9NYU2 1555 aa20.35■□□□□ 0.85
GHDC-203ENST00000428494 KDM5AP29375 1690 aaKnown RBP20.34■□□□□ 0.85
GHDC-203ENST00000428494 ZCCHC11Q5TAX3 1644 aaKnown RBP20.34■□□□□ 0.85
GHDC-203ENST00000428494 CANXP27824 592 aaKnown RBP20.33■□□□□ 0.85
GHDC-203ENST00000428494 USP19O94966 1318 aa20.33■□□□□ 0.84
GHDC-203ENST00000428494 CENPJQ9HC77 1338 aaPredicted RBP20.33■□□□□ 0.84
GHDC-203ENST00000428494 ZFYVE16Q7Z3T8 1539 aa20.31■□□□□ 0.84
GHDC-203ENST00000428494 CLUAP1Q96AJ1 413 aa20.31■□□□□ 0.84
GHDC-203ENST00000428494 TNNQ9UQP3 1299 aa20.31■□□□□ 0.84
GHDC-203ENST00000428494 PDE3AQ14432 1141 aa20.3■□□□□ 0.84
GHDC-203ENST00000428494 RTEL1-TNFRSF6BF6WH68 1400 aa20.29■□□□□ 0.84
GHDC-203ENST00000428494 KANK1Q14678 1352 aa20.29■□□□□ 0.84
GHDC-203ENST00000428494 CGNL1Q0VF96 1302 aa20.29■□□□□ 0.84
GHDC-203ENST00000428494 BCL2L13Q9BXK5 485 aa20.28■□□□□ 0.84
GHDC-203ENST00000428494 SLC12A5Q9H2X9 1139 aa20.28■□□□□ 0.84
GHDC-203ENST00000428494 CHGAP10645 457 aaKnown RBP20.27■□□□□ 0.84
GHDC-203ENST00000428494 TRAK1Q9UPV9 953 aa20.27■□□□□ 0.84
GHDC-203ENST00000428494 MORC1Q86VD1 984 aa20.27■□□□□ 0.84
GHDC-203ENST00000428494 TET3O43151 1660 aa20.27■□□□□ 0.84
GHDC-203ENST00000428494 RLBP1P12271 317 aa20.26■□□□□ 0.83
GHDC-203ENST00000428494 ABCA6Q8N139 1617 aa20.26■□□□□ 0.83
GHDC-203ENST00000428494 TCP11L2Q8N4U5 519 aa20.25■□□□□ 0.83
GHDC-203ENST00000428494 DEPDC5O75140 1603 aa20.25■□□□□ 0.83
GHDC-203ENST00000428494 RARSP54136 660 aaKnown RBP20.24■□□□□ 0.83
GHDC-203ENST00000428494 PCDHB15Q9Y5E8 787 aa20.24■□□□□ 0.83
GHDC-203ENST00000428494 POLR3AO14802 1390 aaPredicted RBP20.24■□□□□ 0.83
GHDC-203ENST00000428494 MAP3K4Q9Y6R4 1608 aa20.24■□□□□ 0.83
GHDC-203ENST00000428494 KIAA1210Q9ULL0 1709 aa20.23■□□□□ 0.83
GHDC-203ENST00000428494 TMEM132EQ6IEE7 984 aa20.23■□□□□ 0.83
GHDC-203ENST00000428494 NSD3Q9BZ95 1437 aa20.23■□□□□ 0.83
GHDC-203ENST00000428494 NGEFQ8N5V2 710 aa20.22■□□□□ 0.83
GHDC-203ENST00000428494 ATP7AQ04656 1500 aa20.21■□□□□ 0.83
GHDC-203ENST00000428494 SLC24A1O60721 1099 aa20.21■□□□□ 0.83
GHDC-203ENST00000428494 RUNDC1Q96C34 613 aa20.21■□□□□ 0.83
GHDC-203ENST00000428494 SLKQ9H2G2 1235 aaPredicted RBP20.21■□□□□ 0.83
GHDC-203ENST00000428494 MTHFSP49914 203 aa20.2■□□□□ 0.82
GHDC-203ENST00000428494 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.2■□□□□ 0.82
GHDC-203ENST00000428494 VWDEQ8N2E2 1590 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms