RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 BCANQ96GW7 911 aa18.41■□□□□ 0.54
DDX39B-209ENST00000428450 AHDC1Q5TGY3 1603 aaPredicted RBP18.41■□□□□ 0.54
DDX39B-209ENST00000428450 CHD2O14647 1828 aaKnown RBP18.4■□□□□ 0.54
DDX39B-209ENST00000428450 RRP7BPQ9NSQ0 103 aa18.4■□□□□ 0.54
DDX39B-209ENST00000428450 NOS1P29475 1434 aa18.4■□□□□ 0.54
DDX39B-209ENST00000428450 MYOM3Q5VTT5 1437 aa18.4■□□□□ 0.54
DDX39B-209ENST00000428450 ADGRB3O60242 1522 aa18.39■□□□□ 0.53
DDX39B-209ENST00000428450 LMTK2Q8IWU2 1503 aa18.39■□□□□ 0.53
DDX39B-209ENST00000428450 SLC52A1Q9NWF4 448 aa18.37■□□□□ 0.53
DDX39B-209ENST00000428450 AFF2P51816 1311 aa18.37■□□□□ 0.53
DDX39B-209ENST00000428450 KANK1Q14678 1352 aa18.37■□□□□ 0.53
DDX39B-209ENST00000428450 PLEKHG1Q9ULL1 1385 aa18.37■□□□□ 0.53
DDX39B-209ENST00000428450 ZFYVE9O95405 1425 aa18.37■□□□□ 0.53
DDX39B-209ENST00000428450 NUTM2BA6NNL0 878 aaPredicted RBP18.36■□□□□ 0.53
DDX39B-209ENST00000428450 NUTM2EB1AL46 878 aaPredicted RBP18.36■□□□□ 0.53
DDX39B-209ENST00000428450 DIP2AQ14689 1571 aa18.36■□□□□ 0.53
DDX39B-209ENST00000428450 CADPS2Q86UW7 1296 aa18.36■□□□□ 0.53
DDX39B-209ENST00000428450 NUTM2AQ8IVF1 878 aaPredicted RBP18.36■□□□□ 0.53
DDX39B-209ENST00000428450 C19orf44Q9H6X5 657 aa18.36■□□□□ 0.53
DDX39B-209ENST00000428450 TBX22Q9Y458 520 aa18.36■□□□□ 0.53
DDX39B-209ENST00000428450 RGS12O14924 1447 aa18.35■□□□□ 0.53
DDX39B-209ENST00000428450 ABCC5O15440 1437 aa18.34■□□□□ 0.53
DDX39B-209ENST00000428450 BRINP3Q76B58 766 aa18.34■□□□□ 0.53
DDX39B-209ENST00000428450 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.33■□□□□ 0.52
DDX39B-209ENST00000428450 KANK4Q5T7N3 995 aaPredicted RBP18.33■□□□□ 0.52
DDX39B-209ENST00000428450 C14orf37Q86TY3 774 aa18.33■□□□□ 0.52
DDX39B-209ENST00000428450 ATF3P18847 181 aa18.32■□□□□ 0.52
DDX39B-209ENST00000428450 RBM6P78332 1123 aaKnown RBP18.31■□□□□ 0.52
DDX39B-209ENST00000428450 QTRT2Q9H974 415 aaKnown RBP18.31■□□□□ 0.52
DDX39B-209ENST00000428450 RIMS2Q9UQ26 1411 aa18.31■□□□□ 0.52
DDX39B-209ENST00000428450 PPP1R15AO75807 674 aaPredicted RBP18.29■□□□□ 0.52
DDX39B-209ENST00000428450 ADAMTS13Q76LX8 1427 aa18.29■□□□□ 0.52
DDX39B-209ENST00000428450 SETD5Q9C0A6 1442 aa18.29■□□□□ 0.52
DDX39B-209ENST00000428450 HDGFP51858 240 aaKnown RBP18.28■□□□□ 0.52
DDX39B-209ENST00000428450 NUTM2DQ5VT03 806 aaPredicted RBP18.27■□□□□ 0.52
DDX39B-209ENST00000428450 CROCC2H7BZ55 1655 aa18.27■□□□□ 0.52
DDX39B-209ENST00000428450 C8orf37Q96NL8 207 aa18.26■□□□□ 0.51
DDX39B-209ENST00000428450 MYO5BQ9ULV0 1848 aa18.26■□□□□ 0.51
DDX39B-209ENST00000428450 PIK3R4Q99570 1358 aa18.25■□□□□ 0.51
DDX39B-209ENST00000428450 DAPK1P53355 1430 aa18.24■□□□□ 0.51
DDX39B-209ENST00000428450 LRRC59Q96AG4 307 aaKnown RBP18.24■□□□□ 0.51
DDX39B-209ENST00000428450 EP400Q96L91 3159 aa18.24■□□□□ 0.51
DDX39B-209ENST00000428450 ASXL1Q8IXJ9 1541 aa18.23■□□□□ 0.51
DDX39B-209ENST00000428450 TMEM131LA2VDJ0 1609 aa18.23■□□□□ 0.51
DDX39B-209ENST00000428450 ZRANB1Q9UGI0 708 aa18.23■□□□□ 0.51
DDX39B-209ENST00000428450 RPRD2Q5VT52 1461 aaKnown RBP18.22■□□□□ 0.51
DDX39B-209ENST00000428450 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.22■□□□□ 0.51
DDX39B-209ENST00000428450 CHIC2Q9UKJ5 165 aa18.22■□□□□ 0.51
DDX39B-209ENST00000428450 AMOTL2Q9Y2J4 779 aa18.22■□□□□ 0.51
DDX39B-209ENST00000428450 PTPRUQ92729 1446 aa18.22■□□□□ 0.51
DDX39B-209ENST00000428450 ATAD2Q6PL18 1390 aa18.21■□□□□ 0.51
DDX39B-209ENST00000428450 PNPLA6Q8IY17 1366 aa18.21■□□□□ 0.51
DDX39B-209ENST00000428450 ANKRD30AQ9BXX3 1397 aa18.21■□□□□ 0.51
DDX39B-209ENST00000428450 DCCP43146 1447 aa18.21■□□□□ 0.51
DDX39B-209ENST00000428450 VPS8Q8N3P4 1428 aa18.21■□□□□ 0.51
DDX39B-209ENST00000428450 GCC2Q8IWJ2 1684 aa18.21■□□□□ 0.51
DDX39B-209ENST00000428450 SETBP1Q9Y6X0 1596 aa18.21■□□□□ 0.51
DDX39B-209ENST00000428450 NGLY1Q96IV0 654 aa18.2■□□□□ 0.5
DDX39B-209ENST00000428450 MST1RQ04912 1400 aa18.2■□□□□ 0.5
DDX39B-209ENST00000428450 DDX17Q92841 729 aaKnown RBP18.19■□□□□ 0.5
DDX39B-209ENST00000428450 NHSL1Q5SYE7 1610 aa18.19■□□□□ 0.5
DDX39B-209ENST00000428450 PTPN23Q9H3S7 1636 aa18.18■□□□□ 0.5
DDX39B-209ENST00000428450 FOXD1Q16676 465 aa18.17■□□□□ 0.5
DDX39B-209ENST00000428450 ADAMTS2O95450 1211 aa18.15■□□□□ 0.5
DDX39B-209ENST00000428450 CHGAP10645 457 aaKnown RBP18.15■□□□□ 0.5
DDX39B-209ENST00000428450 TRPM2O94759 1503 aa18.14■□□□□ 0.49
DDX39B-209ENST00000428450 USP21Q9UK80 565 aa18.13■□□□□ 0.49
DDX39B-209ENST00000428450 TRPC5Q9UL62 973 aaPredicted RBP18.12■□□□□ 0.49
DDX39B-209ENST00000428450 CCDC125Q86Z20 511 aa18.11■□□□□ 0.49
DDX39B-209ENST00000428450 FNBP4Q8N3X1 1017 aaPredicted RBP18.11■□□□□ 0.49
DDX39B-209ENST00000428450 XRN1Q8IZH2 1706 aaKnown RBP18.09■□□□□ 0.49
DDX39B-209ENST00000428450 UNC13BO14795 1591 aa18.09■□□□□ 0.49
DDX39B-209ENST00000428450 ADGRL2O95490 1459 aa18.09■□□□□ 0.49
DDX39B-209ENST00000428450 ATRNO75882 1429 aa18.08■□□□□ 0.49
DDX39B-209ENST00000428450 ANKRD50Q9ULJ7 1429 aa18.08■□□□□ 0.49
DDX39B-209ENST00000428450 ADGRL3Q9HAR2 1447 aa18.06■□□□□ 0.48
DDX39B-209ENST00000428450 METP08581 1390 aa18.05■□□□□ 0.48
DDX39B-209ENST00000428450 NRXN3Q9Y4C0 1643 aa18.05■□□□□ 0.48
DDX39B-209ENST00000428450 SOS2Q07890 1332 aaPredicted RBP18.05■□□□□ 0.48
DDX39B-209ENST00000428450 PTCH1Q13635 1447 aa18.05■□□□□ 0.48
DDX39B-209ENST00000428450 C1orf167Q5SNV9 1468 aa18.04■□□□□ 0.48
DDX39B-209ENST00000428450 LAMC1P11047 1609 aa18.03■□□□□ 0.48
DDX39B-209ENST00000428450 E9PCH4 1651 aa18.02■□□□□ 0.47
DDX39B-209ENST00000428450 BCL9LQ86UU0 1499 aa18.01■□□□□ 0.47
DDX39B-209ENST00000428450 ORAI2Q96SN7 254 aa18.01■□□□□ 0.47
DDX39B-209ENST00000428450 NALCNQ8IZF0 1738 aa17.99■□□□□ 0.47
DDX39B-209ENST00000428450 GJD4Q96KN9 370 aaPredicted RBP17.98■□□□□ 0.47
DDX39B-209ENST00000428450 BLMP54132 1417 aaPredicted RBP17.97■□□□□ 0.47
DDX39B-209ENST00000428450 MYOM2P54296 1465 aa17.96■□□□□ 0.47
DDX39B-209ENST00000428450 DEFB132Q7Z7B7 95 aa17.96■□□□□ 0.47
DDX39B-209ENST00000428450 COL22A1Q8NFW1 1626 aaPredicted RBP17.96■□□□□ 0.47
DDX39B-209ENST00000428450 LOC105371045A0A1W2PR82 267 aa17.95■□□□□ 0.46
DDX39B-209ENST00000428450 LRP5O75197 1615 aa17.94■□□□□ 0.46
DDX39B-209ENST00000428450 IQGAP3Q86VI3 1631 aa17.92■□□□□ 0.46
DDX39B-209ENST00000428450 APLP2Q06481 763 aa17.91■□□□□ 0.46
DDX39B-209ENST00000428450 FAM50AQ14320 339 aaKnown RBP17.91■□□□□ 0.46
DDX39B-209ENST00000428450 ZNF326Q5BKZ1 582 aaKnown RBP17.9■□□□□ 0.46
DDX39B-209ENST00000428450 ROBO2Q9HCK4 1378 aa17.89■□□□□ 0.45
DDX39B-209ENST00000428450 RALGAPBQ86X10 1494 aa17.88■□□□□ 0.45
DDX39B-209ENST00000428450 GLI3P10071 1580 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms