RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 MS4A1P11836 297 aa18.83■□□□□ 0.61
ERCC3-202ENST00000426778 CHGAP10645 457 aaKnown RBP18.83■□□□□ 0.6
ERCC3-202ENST00000426778 EIF2AK4Q9P2K8 1649 aaKnown RBP18.82■□□□□ 0.6
ERCC3-202ENST00000426778 RTN4Q9NQC3 1192 aaKnown RBP18.82■□□□□ 0.6
ERCC3-202ENST00000426778 PLXNC1O60486 1568 aa18.81■□□□□ 0.6
ERCC3-202ENST00000426778 PLCH2O75038 1416 aa18.81■□□□□ 0.6
ERCC3-202ENST00000426778 ABCC2Q92887 1545 aa18.81■□□□□ 0.6
ERCC3-202ENST00000426778 ADGRF5Q8IZF2 1346 aa18.8■□□□□ 0.6
ERCC3-202ENST00000426778 ATP10AO60312 1499 aa18.79■□□□□ 0.6
ERCC3-202ENST00000426778 UGGT1Q9NYU2 1555 aa18.79■□□□□ 0.6
ERCC3-202ENST00000426778 RRP7AQ9Y3A4 280 aaKnown RBP18.79■□□□□ 0.6
ERCC3-202ENST00000426778 KDM2BQ8NHM5 1336 aa18.79■□□□□ 0.6
ERCC3-202ENST00000426778 MADDQ8WXG6 1647 aa18.78■□□□□ 0.6
ERCC3-202ENST00000426778 SLFN5Q08AF3 891 aa18.78■□□□□ 0.6
ERCC3-202ENST00000426778 LAMC1P11047 1609 aa18.78■□□□□ 0.6
ERCC3-202ENST00000426778 IL27Q8NEV9 243 aa18.78■□□□□ 0.6
ERCC3-202ENST00000426778 CARD14Q9BXL6 1004 aa18.78■□□□□ 0.6
ERCC3-202ENST00000426778 ZNF521Q96K83 1311 aa18.77■□□□□ 0.6
ERCC3-202ENST00000426778 RNF17Q9BXT8 1623 aaKnown RBP18.77■□□□□ 0.59
ERCC3-202ENST00000426778 SCAF11Q99590 1463 aaKnown RBP18.76■□□□□ 0.59
ERCC3-202ENST00000426778 CLTCL1P53675 1640 aa18.75■□□□□ 0.59
ERCC3-202ENST00000426778 NUTM2DQ5VT03 806 aaPredicted RBP18.75■□□□□ 0.59
ERCC3-202ENST00000426778 CDCA8Q53HL2 280 aa18.74■□□□□ 0.59
ERCC3-202ENST00000426778 CENPQQ7L2Z9 268 aaPredicted RBP18.74■□□□□ 0.59
ERCC3-202ENST00000426778 ZCCHC11Q5TAX3 1644 aaKnown RBP18.74■□□□□ 0.59
ERCC3-202ENST00000426778 ABCC1P33527 1531 aa18.74■□□□□ 0.59
ERCC3-202ENST00000426778 ASXL1Q8IXJ9 1541 aa18.74■□□□□ 0.59
ERCC3-202ENST00000426778 TRAK1Q9UPV9 953 aa18.73■□□□□ 0.59
ERCC3-202ENST00000426778 SCAPERQ9BY12 1400 aa18.73■□□□□ 0.59
ERCC3-202ENST00000426778 C8orf34Q49A92 452 aa18.73■□□□□ 0.59
ERCC3-202ENST00000426778 PANK1Q8TE04 598 aa18.73■□□□□ 0.59
ERCC3-202ENST00000426778 FRAT1Q92837 279 aaPredicted RBP18.73■□□□□ 0.59
ERCC3-202ENST00000426778 IQGAP1P46940 1657 aa18.72■□□□□ 0.59
ERCC3-202ENST00000426778 CFAP65Q6ZU64 1925 aaKnown RBP18.72■□□□□ 0.59
ERCC3-202ENST00000426778 IGHDP01880 384 aa18.71■□□□□ 0.59
ERCC3-202ENST00000426778 BCL2L13Q9BXK5 485 aa18.71■□□□□ 0.59
ERCC3-202ENST00000426778 TMEM132EQ6IEE7 984 aa18.71■□□□□ 0.59
ERCC3-202ENST00000426778 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.71■□□□□ 0.59
ERCC3-202ENST00000426778 CANXP27824 592 aaKnown RBP18.7■□□□□ 0.58
ERCC3-202ENST00000426778 DAXXQ9UER7 740 aaPredicted RBP18.7■□□□□ 0.58
ERCC3-202ENST00000426778 COG6Q9Y2V7 657 aa18.7■□□□□ 0.58
ERCC3-202ENST00000426778 TNNQ9UQP3 1299 aa18.7■□□□□ 0.58
ERCC3-202ENST00000426778 FAM161AQ3B820 660 aa18.69■□□□□ 0.58
ERCC3-202ENST00000426778 SLC12A5Q9H2X9 1139 aa18.69■□□□□ 0.58
ERCC3-202ENST00000426778 SHROOM2Q13796 1616 aa18.68■□□□□ 0.58
ERCC3-202ENST00000426778 TRPM2O94759 1503 aa18.68■□□□□ 0.58
ERCC3-202ENST00000426778 MYOM1P52179 1685 aa18.68■□□□□ 0.58
ERCC3-202ENST00000426778 SPHKAPQ2M3C7 1700 aa18.68■□□□□ 0.58
ERCC3-202ENST00000426778 SYNMO15061 1565 aa18.67■□□□□ 0.58
ERCC3-202ENST00000426778 ZFYVE16Q7Z3T8 1539 aa18.67■□□□□ 0.58
ERCC3-202ENST00000426778 INSRP06213 1382 aa18.67■□□□□ 0.58
ERCC3-202ENST00000426778 NFKBIBQ15653 356 aa18.67■□□□□ 0.58
ERCC3-202ENST00000426778 DDRGK1Q96HY6 314 aa18.66■□□□□ 0.58
ERCC3-202ENST00000426778 EIF3AQ14152 1382 aaKnown RBP18.66■□□□□ 0.58
ERCC3-202ENST00000426778 KANK1Q14678 1352 aa18.66■□□□□ 0.58
ERCC3-202ENST00000426778 SAFB2Q14151 953 aaKnown RBP eCLIP18.66■□□□□ 0.58
ERCC3-202ENST00000426778 PPM1GO15355 546 aaPredicted RBP18.65■□□□□ 0.58
ERCC3-202ENST00000426778 ERVK-7P63135 1459 aa18.65■□□□□ 0.58
ERCC3-202ENST00000426778 PIK3C2GO75747 1445 aa18.65■□□□□ 0.58
ERCC3-202ENST00000426778 TRMT2AQ8IZ69 625 aaKnown RBP18.65■□□□□ 0.58
ERCC3-202ENST00000426778 CLUAP1Q96AJ1 413 aa18.65■□□□□ 0.58
ERCC3-202ENST00000426778 CEP152O94986 1710 aa18.64■□□□□ 0.58
ERCC3-202ENST00000426778 GGT6Q6P531 493 aa18.64■□□□□ 0.58
ERCC3-202ENST00000426778 PTPRTO14522 1441 aa18.64■□□□□ 0.57
ERCC3-202ENST00000426778 NKTRP30414 1462 aaKnown RBP18.64■□□□□ 0.57
ERCC3-202ENST00000426778 MORC1Q86VD1 984 aa18.63■□□□□ 0.57
ERCC3-202ENST00000426778 E9PSI1 815 aa18.63■□□□□ 0.57
ERCC3-202ENST00000426778 SEC24BO95487 1268 aa18.63■□□□□ 0.57
ERCC3-202ENST00000426778 WWC1Q8IX03 1113 aa18.63■□□□□ 0.57
ERCC3-202ENST00000426778 FANCAO15360 1455 aa18.62■□□□□ 0.57
ERCC3-202ENST00000426778 CENPJQ9HC77 1338 aaPredicted RBP18.61■□□□□ 0.57
ERCC3-202ENST00000426778 KDM5AP29375 1690 aaKnown RBP18.61■□□□□ 0.57
ERCC3-202ENST00000426778 NOS1P29475 1434 aa18.6■□□□□ 0.57
ERCC3-202ENST00000426778 NSD3Q9BZ95 1437 aa18.6■□□□□ 0.57
ERCC3-202ENST00000426778 FRAT2O75474 233 aaPredicted RBP18.6■□□□□ 0.57
ERCC3-202ENST00000426778 BRPF3Q9ULD4 1205 aa18.59■□□□□ 0.57
ERCC3-202ENST00000426778 ATP7AQ04656 1500 aa18.59■□□□□ 0.57
ERCC3-202ENST00000426778 ABCA6Q8N139 1617 aa18.59■□□□□ 0.57
ERCC3-202ENST00000426778 TCP11L2Q8N4U5 519 aa18.58■□□□□ 0.57
ERCC3-202ENST00000426778 RLBP1P12271 317 aa18.58■□□□□ 0.56
ERCC3-202ENST00000426778 ADGRL1O94910 1474 aa18.57■□□□□ 0.56
ERCC3-202ENST00000426778 MTHFSP49914 203 aa18.57■□□□□ 0.56
ERCC3-202ENST00000426778 USP35Q9P2H5 1018 aa18.57■□□□□ 0.56
ERCC3-202ENST00000426778 TET3O43151 1660 aa18.56■□□□□ 0.56
ERCC3-202ENST00000426778 RTEL1-TNFRSF6BF6WH68 1400 aa18.56■□□□□ 0.56
ERCC3-202ENST00000426778 MAP3K4Q9Y6R4 1608 aa18.54■□□□□ 0.56
ERCC3-202ENST00000426778 NPC1L1Q9UHC9 1359 aa18.54■□□□□ 0.56
ERCC3-202ENST00000426778 MROH2AA6NES4 1674 aa18.53■□□□□ 0.56
ERCC3-202ENST00000426778 SLKQ9H2G2 1235 aaPredicted RBP18.53■□□□□ 0.56
ERCC3-202ENST00000426778 GSE1Q14687 1217 aa18.53■□□□□ 0.56
ERCC3-202ENST00000426778 PCDHB15Q9Y5E8 787 aa18.53■□□□□ 0.56
ERCC3-202ENST00000426778 CABP2Q9NPB3 220 aa18.52■□□□□ 0.56
ERCC3-202ENST00000426778 RARSP54136 660 aaKnown RBP18.52■□□□□ 0.55
ERCC3-202ENST00000426778 STK26Q9P289 416 aa18.52■□□□□ 0.55
ERCC3-202ENST00000426778 CLASP1Q7Z460 1538 aa18.51■□□□□ 0.55
ERCC3-202ENST00000426778 DEPDC5O75140 1603 aa18.51■□□□□ 0.55
ERCC3-202ENST00000426778 U2AF1L5P0DN76 240 aaPredicted RBP18.51■□□□□ 0.55
ERCC3-202ENST00000426778 U2AF1Q01081 240 aaKnown RBP eCLIP18.51■□□□□ 0.55
ERCC3-202ENST00000426778 STAC3Q96MF2 364 aa18.51■□□□□ 0.55
ERCC3-202ENST00000426778 TSR2Q969E8 191 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms