RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 WDR7Q9Y4E6 1490 aa9.77□□□□□ -0.85
SMARCC1-202ENST00000425518 ZNF521Q96K83 1311 aa9.77□□□□□ -0.85
SMARCC1-202ENST00000425518 C8orf34Q49A92 452 aa9.77□□□□□ -0.85
SMARCC1-202ENST00000425518 CDC42BPBQ9Y5S2 1711 aa9.77□□□□□ -0.85
SMARCC1-202ENST00000425518 DMRT2Q9Y5R5 561 aa9.76□□□□□ -0.85
SMARCC1-202ENST00000425518 CHGAP10645 457 aaKnown RBP9.76□□□□□ -0.85
SMARCC1-202ENST00000425518 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.75□□□□□ -0.855e-18■□□□□ 8.8
SMARCC1-202ENST00000425518 KIF3BO15066 747 aa9.75□□□□□ -0.85
SMARCC1-202ENST00000425518 FRAT1Q92837 279 aaPredicted RBP9.75□□□□□ -0.85
SMARCC1-202ENST00000425518 PREX2Q70Z35 1606 aa9.75□□□□□ -0.85
SMARCC1-202ENST00000425518 TRAPPC8Q9Y2L5 1435 aa9.75□□□□□ -0.85
SMARCC1-202ENST00000425518 CHD1O14646 1710 aa9.75□□□□□ -0.85
SMARCC1-202ENST00000425518 E9PSI1 815 aa9.75□□□□□ -0.85
SMARCC1-202ENST00000425518 GSE1Q14687 1217 aa9.75□□□□□ -0.85
SMARCC1-202ENST00000425518 TTC37Q6PGP7 1564 aa9.75□□□□□ -0.85
SMARCC1-202ENST00000425518 IGHDP01880 384 aa9.74□□□□□ -0.85
SMARCC1-202ENST00000425518 COG6Q9Y2V7 657 aa9.74□□□□□ -0.85
SMARCC1-202ENST00000425518 RRP7AQ9Y3A4 280 aaKnown RBP9.74□□□□□ -0.85
SMARCC1-202ENST00000425518 DUOX2Q9NRD8 1548 aa9.74□□□□□ -0.85
SMARCC1-202ENST00000425518 PANK1Q8TE04 598 aa9.74□□□□□ -0.85
SMARCC1-202ENST00000425518 CARD14Q9BXL6 1004 aa9.74□□□□□ -0.85
SMARCC1-202ENST00000425518 SCAF11Q99590 1463 aaKnown RBP9.73□□□□□ -0.85
SMARCC1-202ENST00000425518 UNC13BO14795 1591 aa9.73□□□□□ -0.85
SMARCC1-202ENST00000425518 ATP10AO60312 1499 aa9.73□□□□□ -0.85
SMARCC1-202ENST00000425518 TRMT2AQ8IZ69 625 aaKnown RBP9.73□□□□□ -0.85
SMARCC1-202ENST00000425518 BRPF3Q9ULD4 1205 aa9.73□□□□□ -0.85
SMARCC1-202ENST00000425518 EIF2AK4Q9P2K8 1649 aaKnown RBP9.73□□□□□ -0.85
SMARCC1-202ENST00000425518 FRAT2O75474 233 aaPredicted RBP9.72□□□□□ -0.85
SMARCC1-202ENST00000425518 ANO8Q9HCE9 1232 aaPredicted RBP9.72□□□□□ -0.85
SMARCC1-202ENST00000425518 PLCH2O75038 1416 aa9.72□□□□□ -0.85
SMARCC1-202ENST00000425518 ADGRF5Q8IZF2 1346 aa9.72□□□□□ -0.85
SMARCC1-202ENST00000425518 CENPJQ9HC77 1338 aaPredicted RBP9.72□□□□□ -0.85
SMARCC1-202ENST00000425518 EIF3AQ14152 1382 aaKnown RBP9.72□□□□□ -0.85
SMARCC1-202ENST00000425518 ASXL1Q8IXJ9 1541 aa9.72□□□□□ -0.85
SMARCC1-202ENST00000425518 MORC1Q86VD1 984 aa9.71□□□□□ -0.85
SMARCC1-202ENST00000425518 IQGAP3Q86VI3 1631 aa9.71□□□□□ -0.85
SMARCC1-202ENST00000425518 STAC3Q96MF2 364 aa9.71□□□□□ -0.86
SMARCC1-202ENST00000425518 WWC1Q8IX03 1113 aa9.71□□□□□ -0.86
SMARCC1-202ENST00000425518 BCL2L13Q9BXK5 485 aa9.71□□□□□ -0.86
SMARCC1-202ENST00000425518 PIK3C2GO75747 1445 aa9.7□□□□□ -0.86
SMARCC1-202ENST00000425518 TRAK1Q9UPV9 953 aa9.7□□□□□ -0.86
SMARCC1-202ENST00000425518 NKTRP30414 1462 aaKnown RBP9.7□□□□□ -0.86
SMARCC1-202ENST00000425518 MAST1Q9Y2H9 1570 aa9.7□□□□□ -0.86
SMARCC1-202ENST00000425518 KANK1Q14678 1352 aa9.7□□□□□ -0.86
SMARCC1-202ENST00000425518 CLUAP1Q96AJ1 413 aa9.7□□□□□ -0.86
SMARCC1-202ENST00000425518 LAMC1P11047 1609 aa9.7□□□□□ -0.86
SMARCC1-202ENST00000425518 SLC12A5Q9H2X9 1139 aa9.69□□□□□ -0.86
SMARCC1-202ENST00000425518 SEC24BO95487 1268 aa9.69□□□□□ -0.86
SMARCC1-202ENST00000425518 CGNL1Q0VF96 1302 aa9.69□□□□□ -0.86
SMARCC1-202ENST00000425518 SENP3Q9H4L4 574 aaPredicted RBP9.69□□□□□ -0.86
SMARCC1-202ENST00000425518 PDE3AQ14432 1141 aa9.68□□□□□ -0.86
SMARCC1-202ENST00000425518 ERCC6L2Q5T890 1561 aa9.68□□□□□ -0.86
SMARCC1-202ENST00000425518 MYO5CQ9NQX4 1742 aa9.68□□□□□ -0.86
SMARCC1-202ENST00000425518 SLC24A1O60721 1099 aa9.68□□□□□ -0.86
SMARCC1-202ENST00000425518 TCP11L2Q8N4U5 519 aa9.68□□□□□ -0.86
SMARCC1-202ENST00000425518 SLKQ9H2G2 1235 aaPredicted RBP9.68□□□□□ -0.86
SMARCC1-202ENST00000425518 TNNQ9UQP3 1299 aa9.68□□□□□ -0.86
SMARCC1-202ENST00000425518 NPC1L1Q9UHC9 1359 aa9.67□□□□□ -0.86
SMARCC1-202ENST00000425518 PLXNC1O60486 1568 aa9.67□□□□□ -0.86
SMARCC1-202ENST00000425518 TMEM132EQ6IEE7 984 aa9.67□□□□□ -0.86
SMARCC1-202ENST00000425518 SCAPERQ9BY12 1400 aa9.67□□□□□ -0.86
SMARCC1-202ENST00000425518 ABCC2Q92887 1545 aa9.66□□□□□ -0.86
SMARCC1-202ENST00000425518 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.66□□□□□ -0.86
SMARCC1-202ENST00000425518 MTHFSP49914 203 aa9.66□□□□□ -0.86
SMARCC1-202ENST00000425518 NUTM2DQ5VT03 806 aaPredicted RBP9.66□□□□□ -0.86
SMARCC1-202ENST00000425518 MADDQ8WXG6 1647 aa9.65□□□□□ -0.86
SMARCC1-202ENST00000425518 RARSP54136 660 aaKnown RBP9.65□□□□□ -0.86
SMARCC1-202ENST00000425518 RUNDC1Q96C34 613 aa9.65□□□□□ -0.86
SMARCC1-202ENST00000425518 PTPRTO14522 1441 aa9.65□□□□□ -0.86
SMARCC1-202ENST00000425518 RLBP1P12271 317 aa9.65□□□□□ -0.86
SMARCC1-202ENST00000425518 OSCARQ8IYS5 282 aa9.65□□□□□ -0.86
SMARCC1-202ENST00000425518 NGEFQ8N5V2 710 aa9.65□□□□□ -0.86
SMARCC1-202ENST00000425518 PCDHB15Q9Y5E8 787 aa9.65□□□□□ -0.86
SMARCC1-202ENST00000425518 MAPK8IP3Q9UPT6 1336 aa9.65□□□□□ -0.86
SMARCC1-202ENST00000425518 BECN1Q14457 450 aa9.65□□□□□ -0.87
SMARCC1-202ENST00000425518 USP19O94966 1318 aa9.64□□□□□ -0.87
SMARCC1-202ENST00000425518 SYNMO15061 1565 aa9.64□□□□□ -0.87
SMARCC1-202ENST00000425518 U2AF1L5P0DN76 240 aaPredicted RBP9.64□□□□□ -0.87
SMARCC1-202ENST00000425518 U2AF1Q01081 240 aaKnown RBP eCLIP9.64□□□□□ -0.87
SMARCC1-202ENST00000425518 GGT6Q6P531 493 aa9.64□□□□□ -0.87
SMARCC1-202ENST00000425518 SPRYD3Q8NCJ5 442 aa9.64□□□□□ -0.87
SMARCC1-202ENST00000425518 PMFBP1Q8TBY8 1022 aa9.64□□□□□ -0.87
SMARCC1-202ENST00000425518 UPF2Q9HAU5 1272 aaKnown RBP9.64□□□□□ -0.87
SMARCC1-202ENST00000425518 SAFB2Q14151 953 aaKnown RBP eCLIP9.63□□□□□ -0.87
SMARCC1-202ENST00000425518 NSD3Q9BZ95 1437 aa9.63□□□□□ -0.87
SMARCC1-202ENST00000425518 PDZRN3Q9UPQ7 1066 aa9.63□□□□□ -0.87
SMARCC1-202ENST00000425518 RNF17Q9BXT8 1623 aaKnown RBP9.63□□□□□ -0.87
SMARCC1-202ENST00000425518 ERVK-7P63135 1459 aa9.63□□□□□ -0.87
SMARCC1-202ENST00000425518 CFAP53Q96M91 514 aa9.63□□□□□ -0.87
SMARCC1-202ENST00000425518 TRPM2O94759 1503 aa9.63□□□□□ -0.87
SMARCC1-202ENST00000425518 UGGT1Q9NYU2 1555 aa9.62□□□□□ -0.87
SMARCC1-202ENST00000425518 POLR3AO14802 1390 aaPredicted RBP9.62□□□□□ -0.87
SMARCC1-202ENST00000425518 ABCC1P33527 1531 aa9.62□□□□□ -0.87
SMARCC1-202ENST00000425518 ARXQ96QS3 562 aa9.62□□□□□ -0.87
SMARCC1-202ENST00000425518 RTEL1-TNFRSF6BF6WH68 1400 aa9.62□□□□□ -0.87
SMARCC1-202ENST00000425518 CLTCL1P53675 1640 aa9.62□□□□□ -0.87
SMARCC1-202ENST00000425518 CLASP1Q7Z460 1538 aa9.61□□□□□ -0.87
SMARCC1-202ENST00000425518 RWDD1Q9H446 243 aaPredicted RBP9.61□□□□□ -0.87
SMARCC1-202ENST00000425518 POGKQ9P215 609 aa9.61□□□□□ -0.87
SMARCC1-202ENST00000425518 IQGAP1P46940 1657 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms