RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 FER1L4A9Z1Z3 1794 aa9.87□□□□□ -0.83
LSM8-204ENST00000424702 NOS1P29475 1434 aa9.87□□□□□ -0.83
LSM8-204ENST00000424702 PTPRMP28827 1452 aa9.87□□□□□ -0.83
LSM8-204ENST00000424702 RIMS1Q86UR5 1692 aaKnown RBP9.87□□□□□ -0.83
LSM8-204ENST00000424702 USP47Q96K76 1375 aa9.87□□□□□ -0.83
LSM8-204ENST00000424702 ATF3P18847 181 aa9.86□□□□□ -0.83
LSM8-204ENST00000424702 EVC2Q86UK5 1308 aa9.86□□□□□ -0.83
LSM8-204ENST00000424702 TMEM2Q9UHN6 1383 aa9.86□□□□□ -0.83
LSM8-204ENST00000424702 UGGT1Q9NYU2 1555 aa9.86□□□□□ -0.83
LSM8-204ENST00000424702 HDGFL2Q7Z4V5 671 aaPredicted RBP9.86□□□□□ -0.83
LSM8-204ENST00000424702 TMC1Q8TDI8 760 aa9.86□□□□□ -0.83
LSM8-204ENST00000424702 CENPJQ9HC77 1338 aaPredicted RBP9.86□□□□□ -0.83
LSM8-204ENST00000424702 TRAK1Q9UPV9 953 aa9.85□□□□□ -0.83
LSM8-204ENST00000424702 CEP152O94986 1710 aa9.85□□□□□ -0.83
LSM8-204ENST00000424702 DEPDC5O75140 1603 aa9.84□□□□□ -0.83
LSM8-204ENST00000424702 HAP1P54257 671 aaPredicted RBP9.84□□□□□ -0.83
LSM8-204ENST00000424702 TBX22Q9Y458 520 aa9.84□□□□□ -0.83
LSM8-204ENST00000424702 BCORL1Q5H9F3 1711 aa9.84□□□□□ -0.83
LSM8-204ENST00000424702 MADDQ8WXG6 1647 aa9.83□□□□□ -0.84
LSM8-204ENST00000424702 TERF2IPQ9NYB0 399 aa9.83□□□□□ -0.84
LSM8-204ENST00000424702 SCAF1Q9H7N4 1312 aaKnown RBP9.83□□□□□ -0.84
LSM8-204ENST00000424702 ST20-MTHFSA0A0A6YYL1 179 aa9.83□□□□□ -0.84
LSM8-204ENST00000424702 SAFB2Q14151 953 aaKnown RBP eCLIP9.83□□□□□ -0.84
LSM8-204ENST00000424702 CFAP70Q5T0N1 1121 aa9.83□□□□□ -0.84
LSM8-204ENST00000424702 SLC26A8Q96RN1 970 aa9.83□□□□□ -0.84
LSM8-204ENST00000424702 ADGRB3O60242 1522 aa9.83□□□□□ -0.84
LSM8-204ENST00000424702 SCAF11Q99590 1463 aaKnown RBP9.83□□□□□ -0.84
LSM8-204ENST00000424702 NEFMP07197 916 aa9.83□□□□□ -0.84
LSM8-204ENST00000424702 MROH2AA6NES4 1674 aa9.83□□□□□ -0.84
LSM8-204ENST00000424702 KIF1BO60333 1816 aa9.82□□□□□ -0.84
LSM8-204ENST00000424702 SPHKAPQ2M3C7 1700 aa9.82□□□□□ -0.84
LSM8-204ENST00000424702 C14orf93Q9H972 538 aaKnown RBP9.82□□□□□ -0.84
LSM8-204ENST00000424702 VWDEQ8N2E2 1590 aa9.82□□□□□ -0.84
LSM8-204ENST00000424702 SETD1BQ9UPS6 1966 aaKnown RBP9.82□□□□□ -0.84
LSM8-204ENST00000424702 PLEKHG1Q9ULL1 1385 aa9.81□□□□□ -0.84
LSM8-204ENST00000424702 NPHP4O75161 1426 aaPredicted RBP9.81□□□□□ -0.84
LSM8-204ENST00000424702 SPATA31D1Q6ZQQ2 1576 aa9.81□□□□□ -0.84
LSM8-204ENST00000424702 HSPA2P54652 639 aa9.8□□□□□ -0.84
LSM8-204ENST00000424702 KNSTRNQ9Y448 316 aa9.8□□□□□ -0.84
LSM8-204ENST00000424702 PIK3R4Q99570 1358 aa9.8□□□□□ -0.84
LSM8-204ENST00000424702 NGDNQ8NEJ9 315 aaKnown RBP9.79□□□□□ -0.84
LSM8-204ENST00000424702 MYOM2P54296 1465 aa9.79□□□□□ -0.84
LSM8-204ENST00000424702 ADGRF5Q8IZF2 1346 aa9.79□□□□□ -0.84
LSM8-204ENST00000424702 MINK1Q8N4C8 1332 aaPredicted RBP9.79□□□□□ -0.84
LSM8-204ENST00000424702 CCDC7Q96M83 1385 aa9.79□□□□□ -0.84
LSM8-204ENST00000424702 NCKAP5LQ9HCH0 1330 aa9.79□□□□□ -0.84
LSM8-204ENST00000424702 MRS2Q9HD23 443 aa9.79□□□□□ -0.84
LSM8-204ENST00000424702 AMOTL2Q9Y2J4 779 aa9.79□□□□□ -0.84
LSM8-204ENST00000424702 ZFYVE9O95405 1425 aa9.78□□□□□ -0.84
LSM8-204ENST00000424702 CFAP65Q6ZU64 1925 aaKnown RBP9.78□□□□□ -0.84
LSM8-204ENST00000424702 NBPF1Q3BBV0 1214 aa9.78□□□□□ -0.84
LSM8-204ENST00000424702 E9PCH4 1651 aa9.78□□□□□ -0.84
LSM8-204ENST00000424702 PREX1Q8TCU6 1659 aa9.78□□□□□ -0.84
LSM8-204ENST00000424702 CCER2I3L3R5 266 aa9.78□□□□□ -0.84
LSM8-204ENST00000424702 WASHC2AQ641Q2 1341 aa9.78□□□□□ -0.84
LSM8-204ENST00000424702 MSH6P52701 1360 aa9.78□□□□□ -0.84
LSM8-204ENST00000424702 TMEM132EQ6IEE7 984 aa9.78□□□□□ -0.84
LSM8-204ENST00000424702 CEP170BQ9Y4F5 1589 aaPredicted RBP9.77□□□□□ -0.84
LSM8-204ENST00000424702 KIF7Q2M1P5 1343 aa9.77□□□□□ -0.85
LSM8-204ENST00000424702 NEFLP07196 543 aa9.77□□□□□ -0.85
LSM8-204ENST00000424702 KCNA6P17658 529 aa9.77□□□□□ -0.85
LSM8-204ENST00000424702 LRPPRCP42704 1394 aaKnown RBP9.77□□□□□ -0.85
LSM8-204ENST00000424702 ATAD2Q6PL18 1390 aa9.77□□□□□ -0.85
LSM8-204ENST00000424702 PRAM1Q96QH2 718 aa9.77□□□□□ -0.85
LSM8-204ENST00000424702 RALGAPBQ86X10 1494 aa9.77□□□□□ -0.85
LSM8-204ENST00000424702 PRAG1Q86YV5 1406 aa9.77□□□□□ -0.85
LSM8-204ENST00000424702 LMOD2Q6P5Q4 547 aa9.76□□□□□ -0.85
LSM8-204ENST00000424702 CADPS2Q86UW7 1296 aa9.76□□□□□ -0.85
LSM8-204ENST00000424702 CFAP53Q96M91 514 aa9.76□□□□□ -0.85
LSM8-204ENST00000424702 SPATA31E1Q6ZUB1 1445 aa9.76□□□□□ -0.85
LSM8-204ENST00000424702 GPRASP1Q5JY77 1395 aa9.76□□□□□ -0.85
LSM8-204ENST00000424702 MROH1Q8NDA8 1641 aa9.76□□□□□ -0.85
LSM8-204ENST00000424702 PSME1Q06323 249 aa9.75□□□□□ -0.85
LSM8-204ENST00000424702 FAM9BQ8IZU0 186 aa9.75□□□□□ -0.85
LSM8-204ENST00000424702 CLTCL1P53675 1640 aa9.75□□□□□ -0.85
LSM8-204ENST00000424702 PLA2R1Q13018 1463 aa9.75□□□□□ -0.85
LSM8-204ENST00000424702 SIRT1Q96EB6 747 aa9.74□□□□□ -0.85
LSM8-204ENST00000424702 KDM4FA0A1W2PPD8 638 aa9.74□□□□□ -0.85
LSM8-204ENST00000424702 TOM1O60784 492 aa9.74□□□□□ -0.85
LSM8-204ENST00000424702 HNRNPUQ00839 825 aaKnown RBP eCLIP9.73□□□□□ -0.85
LSM8-204ENST00000424702 ADAMTSL3P82987 1691 aa9.73□□□□□ -0.85
LSM8-204ENST00000424702 SYNMO15061 1565 aa9.73□□□□□ -0.85
LSM8-204ENST00000424702 NEURL4Q96JN8 1562 aa9.73□□□□□ -0.85
LSM8-204ENST00000424702 PELP1Q8IZL8 1130 aaKnown RBP9.72□□□□□ -0.85
LSM8-204ENST00000424702 YTHDC2Q9H6S0 1430 aaKnown RBP9.72□□□□□ -0.85
LSM8-204ENST00000424702 NINLQ9Y2I6 1382 aa9.72□□□□□ -0.85
LSM8-204ENST00000424702 PIK3C2BO00750 1634 aa9.72□□□□□ -0.85
LSM8-204ENST00000424702 PAK3O75914 559 aaPredicted RBP9.72□□□□□ -0.85
LSM8-204ENST00000424702 ABCC11Q96J66 1382 aa9.71□□□□□ -0.85
LSM8-204ENST00000424702 LTKP29376 864 aa9.71□□□□□ -0.86
LSM8-204ENST00000424702 LAMC1P11047 1609 aa9.71□□□□□ -0.86
LSM8-204ENST00000424702 C3P01024 1663 aa9.71□□□□□ -0.86
LSM8-204ENST00000424702 ZNF692Q9BU19 519 aaPredicted RBP9.71□□□□□ -0.86
LSM8-204ENST00000424702 CGNL1Q0VF96 1302 aa9.71□□□□□ -0.86
LSM8-204ENST00000424702 C19orf44Q9H6X5 657 aa9.7□□□□□ -0.86
LSM8-204ENST00000424702 KTN1Q86UP2 1357 aaKnown RBP9.7□□□□□ -0.86
LSM8-204ENST00000424702 DIP2AQ14689 1571 aa9.7□□□□□ -0.86
LSM8-204ENST00000424702 C11orf95C9JLR9 678 aaPredicted RBP9.7□□□□□ -0.86
LSM8-204ENST00000424702 CC2D1BQ5T0F9 858 aaKnown RBP9.7□□□□□ -0.86
LSM8-204ENST00000424702 PUS7Q96PZ0 661 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms