RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 HDGFP51858 240 aaKnown RBP22.81■■□□□ 1.24
ABCA1-203ENST00000423487 MYO5BQ9ULV0 1848 aa22.8■■□□□ 1.24
ABCA1-203ENST00000423487 NEXMIFQ5QGS0 1516 aa22.79■■□□□ 1.24
ABCA1-203ENST00000423487 TMEM2Q9UHN6 1383 aa22.79■■□□□ 1.24
ABCA1-203ENST00000423487 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.79■■□□□ 1.24
ABCA1-203ENST00000423487 ZNF142P52746 1687 aaPredicted RBP22.79■■□□□ 1.24
ABCA1-203ENST00000423487 RIMS2Q9UQ26 1411 aa22.79■■□□□ 1.24
ABCA1-203ENST00000423487 IFT172Q9UG01 1749 aa22.77■■□□□ 1.24
ABCA1-203ENST00000423487 ZFYVE9O95405 1425 aa22.77■■□□□ 1.24
ABCA1-203ENST00000423487 PRAG1Q86YV5 1406 aa22.77■■□□□ 1.24
ABCA1-203ENST00000423487 PPLO60437 1756 aa22.77■■□□□ 1.24
ABCA1-203ENST00000423487 NBPF8Q3BBV2 869 aa22.77■■□□□ 1.24
ABCA1-203ENST00000423487 ADGRF5Q8IZF2 1346 aa22.75■■□□□ 1.23
ABCA1-203ENST00000423487 NUTM2DQ5VT03 806 aaPredicted RBP22.75■■□□□ 1.23
ABCA1-203ENST00000423487 SLIT1O75093 1534 aa22.74■■□□□ 1.23
ABCA1-203ENST00000423487 ARHGAP23Q9P227 1491 aa22.74■■□□□ 1.23
ABCA1-203ENST00000423487 NRXN1Q9ULB1 1477 aa22.74■■□□□ 1.23
ABCA1-203ENST00000423487 EID1Q9Y6B2 187 aa22.73■■□□□ 1.23
ABCA1-203ENST00000423487 TXNDC2Q86VQ3 553 aa22.71■■□□□ 1.23
ABCA1-203ENST00000423487 PIK3C2GO75747 1445 aa22.7■■□□□ 1.22
ABCA1-203ENST00000423487 LTKP29376 864 aa22.67■■□□□ 1.22
ABCA1-203ENST00000423487 RALGAPBQ86X10 1494 aa22.67■■□□□ 1.22
ABCA1-203ENST00000423487 ANKLE2Q86XL3 938 aa22.67■■□□□ 1.22
ABCA1-203ENST00000423487 SCAF11Q99590 1463 aaKnown RBP22.66■■□□□ 1.22
ABCA1-203ENST00000423487 C14orf93Q9H972 538 aaKnown RBP22.65■■□□□ 1.22
ABCA1-203ENST00000423487 PLEKHG1Q9ULL1 1385 aa22.65■■□□□ 1.22
ABCA1-203ENST00000423487 CFAP70Q5T0N1 1121 aa22.64■■□□□ 1.21
ABCA1-203ENST00000423487 ROCK2O75116 1388 aaKnown RBP22.64■■□□□ 1.21
ABCA1-203ENST00000423487 TRPM1Q7Z4N2 1603 aa22.63■■□□□ 1.21
ABCA1-203ENST00000423487 LMTK3Q96Q04 1460 aa22.63■■□□□ 1.21
ABCA1-203ENST00000423487 KIAA1210Q9ULL0 1709 aa22.62■■□□□ 1.21
ABCA1-203ENST00000423487 BCANQ96GW7 911 aa22.62■■□□□ 1.21
ABCA1-203ENST00000423487 NBPF1Q3BBV0 1214 aa22.61■■□□□ 1.21
ABCA1-203ENST00000423487 CARD11Q9BXL7 1154 aa22.61■■□□□ 1.21
ABCA1-203ENST00000423487 GPRASP1Q5JY77 1395 aa22.61■■□□□ 1.21
ABCA1-203ENST00000423487 LAMC1P11047 1609 aa22.59■■□□□ 1.21
ABCA1-203ENST00000423487 SETBP1Q9Y6X0 1596 aa22.59■■□□□ 1.21
ABCA1-203ENST00000423487 SENP3Q9H4L4 574 aaPredicted RBP22.59■■□□□ 1.21
ABCA1-203ENST00000423487 HSPA2P54652 639 aa22.57■■□□□ 1.2
ABCA1-203ENST00000423487 ALKQ9UM73 1620 aa22.57■■□□□ 1.2
ABCA1-203ENST00000423487 NRXN3Q9Y4C0 1643 aa22.54■■□□□ 1.2
ABCA1-203ENST00000423487 ADAMTS13Q76LX8 1427 aa22.54■■□□□ 1.2
ABCA1-203ENST00000423487 NCKAP5LQ9HCH0 1330 aa22.53■■□□□ 1.2
ABCA1-203ENST00000423487 MED14O60244 1454 aa22.53■■□□□ 1.2
ABCA1-203ENST00000423487 EIF4G2P78344 907 aaKnown RBP eCLIP22.53■■□□□ 1.2
ABCA1-203ENST00000423487 NPHP4O75161 1426 aaPredicted RBP22.53■■□□□ 1.2
ABCA1-203ENST00000423487 ADGRB1O14514 1584 aa22.52■■□□□ 1.2
ABCA1-203ENST00000423487 TMEM132EQ6IEE7 984 aa22.52■■□□□ 1.2
ABCA1-203ENST00000423487 TBX22Q9Y458 520 aa22.52■■□□□ 1.2
ABCA1-203ENST00000423487 IQGAP1P46940 1657 aa22.52■■□□□ 1.2
ABCA1-203ENST00000423487 SLC26A8Q96RN1 970 aa22.51■■□□□ 1.19
ABCA1-203ENST00000423487 POLR1AO95602 1720 aaPredicted RBP22.51■■□□□ 1.19
ABCA1-203ENST00000423487 USP47Q96K76 1375 aa22.51■■□□□ 1.19
ABCA1-203ENST00000423487 DIP2AQ14689 1571 aa22.5■■□□□ 1.19
ABCA1-203ENST00000423487 ASXL1Q8IXJ9 1541 aa22.48■■□□□ 1.19
ABCA1-203ENST00000423487 METP08581 1390 aa22.47■■□□□ 1.19
ABCA1-203ENST00000423487 HSPA5P11021 654 aaKnown RBP22.47■■□□□ 1.19
ABCA1-203ENST00000423487 SETD1AO15047 1707 aaKnown RBP22.47■■□□□ 1.19
ABCA1-203ENST00000423487 YTHDC2Q9H6S0 1430 aaKnown RBP22.46■■□□□ 1.19
ABCA1-203ENST00000423487 EIF3AQ14152 1382 aaKnown RBP22.46■■□□□ 1.19
ABCA1-203ENST00000423487 LRPPRCP42704 1394 aaKnown RBP22.45■■□□□ 1.18
ABCA1-203ENST00000423487 AEBP2Q6ZN18 517 aaPredicted RBP22.45■■□□□ 1.18
ABCA1-203ENST00000423487 PIK3R4Q99570 1358 aa22.44■■□□□ 1.18
ABCA1-203ENST00000423487 TRAK1Q9UPV9 953 aa22.44■■□□□ 1.18
ABCA1-203ENST00000423487 STK26Q9P289 416 aa22.43■■□□□ 1.18
ABCA1-203ENST00000423487 ABCC11Q96J66 1382 aa22.42■■□□□ 1.18
ABCA1-203ENST00000423487 ST20-MTHFSA0A0A6YYL1 179 aa22.41■■□□□ 1.18
ABCA1-203ENST00000423487 HIRIP3Q9BW71 556 aaPredicted RBP22.4■■□□□ 1.18
ABCA1-203ENST00000423487 STRCQ7RTU9 1775 aa22.38■■□□□ 1.17
ABCA1-203ENST00000423487 ZNF316A6NFI3 1004 aaPredicted RBP22.38■■□□□ 1.17
ABCA1-203ENST00000423487 AMOTL2Q9Y2J4 779 aa22.38■■□□□ 1.17
ABCA1-203ENST00000423487 DLC1Q96QB1 1528 aa22.38■■□□□ 1.17
ABCA1-203ENST00000423487 TECPR2O15040 1411 aa22.37■■□□□ 1.17
ABCA1-203ENST00000423487 SIRT1Q96EB6 747 aa22.37■■□□□ 1.17
ABCA1-203ENST00000423487 DMRT2Q9Y5R5 561 aa22.37■■□□□ 1.17
ABCA1-203ENST00000423487 PTPRUQ92729 1446 aa22.37■■□□□ 1.17
ABCA1-203ENST00000423487 CENPJQ9HC77 1338 aaPredicted RBP22.37■■□□□ 1.17
ABCA1-203ENST00000423487 POGKQ9P215 609 aa22.35■■□□□ 1.17
ABCA1-203ENST00000423487 SLC24A1O60721 1099 aa22.34■■□□□ 1.17
ABCA1-203ENST00000423487 PRAM1Q96QH2 718 aa22.34■■□□□ 1.17
ABCA1-203ENST00000423487 KNDC1Q76NI1 1749 aa22.33■■□□□ 1.17
ABCA1-203ENST00000423487 KCNA6P17658 529 aa22.33■■□□□ 1.17
ABCA1-203ENST00000423487 FAM135BQ49AJ0 1406 aa22.33■■□□□ 1.17
ABCA1-203ENST00000423487 ARHGEF28Q8N1W1 1705 aaKnown RBP22.33■■□□□ 1.16
ABCA1-203ENST00000423487 CPS1P31327 1500 aa22.33■■□□□ 1.16
ABCA1-203ENST00000423487 TESK2Q96S53 571 aa22.32■■□□□ 1.16
ABCA1-203ENST00000423487 PTCH1Q13635 1447 aa22.31■■□□□ 1.16
ABCA1-203ENST00000423487 ROBO2Q9HCK4 1378 aa22.3■■□□□ 1.16
ABCA1-203ENST00000423487 SBNO2Q9Y2G9 1366 aa22.3■■□□□ 1.16
ABCA1-203ENST00000423487 XRN1Q8IZH2 1706 aaKnown RBP22.3■■□□□ 1.16
ABCA1-203ENST00000423487 CHD2O14647 1828 aaKnown RBP22.3■■□□□ 1.16
ABCA1-203ENST00000423487 WAPLQ7Z5K2 1190 aa22.29■■□□□ 1.16
ABCA1-203ENST00000423487 SAFB2Q14151 953 aaKnown RBP eCLIP22.28■■□□□ 1.16
ABCA1-203ENST00000423487 TMF1P82094 1093 aa22.27■■□□□ 1.16
ABCA1-203ENST00000423487 NWD1Q149M9 1564 aa22.27■■□□□ 1.16
ABCA1-203ENST00000423487 PLEKHH1Q9ULM0 1364 aa22.27■■□□□ 1.15
ABCA1-203ENST00000423487 QRICH2Q9H0J4 1663 aa22.25■■□□□ 1.15
ABCA1-203ENST00000423487 CDCA8Q53HL2 280 aa22.23■■□□□ 1.15
ABCA1-203ENST00000423487 NKTRP30414 1462 aaKnown RBP22.23■■□□□ 1.15
ABCA1-203ENST00000423487 MINK1Q8N4C8 1332 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms