RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 ZFYVE9O95405 1425 aa18.52■□□□□ 0.56
ATG4B-208ENST00000419606 RIMS2Q9UQ26 1411 aa18.52■□□□□ 0.56
ATG4B-208ENST00000419606 THEMISQ8N1K5 641 aaPredicted RBP18.52■□□□□ 0.56
ATG4B-208ENST00000419606 TMEM2Q9UHN6 1383 aa18.52■□□□□ 0.55
ATG4B-208ENST00000419606 HSPA2P54652 639 aa18.51■□□□□ 0.55
ATG4B-208ENST00000419606 SENP3Q9H4L4 574 aaPredicted RBP18.51■□□□□ 0.55
ATG4B-208ENST00000419606 ARHGAP23Q9P227 1491 aa18.51■□□□□ 0.55
ATG4B-208ENST00000419606 LTKP29376 864 aa18.5■□□□□ 0.55
ATG4B-208ENST00000419606 SLIT1O75093 1534 aa18.49■□□□□ 0.55
ATG4B-208ENST00000419606 RPGRIP1LQ68CZ1 1315 aa18.49■□□□□ 0.55
ATG4B-208ENST00000419606 ADGRF5Q8IZF2 1346 aa18.49■□□□□ 0.55
ATG4B-208ENST00000419606 PPP1R15AO75807 674 aaPredicted RBP18.46■□□□□ 0.55
ATG4B-208ENST00000419606 NBPF8Q3BBV2 869 aa18.46■□□□□ 0.55
ATG4B-208ENST00000419606 TXNDC2Q86VQ3 553 aa18.46■□□□□ 0.55
ATG4B-208ENST00000419606 TIMELESSQ9UNS1 1208 aa18.46■□□□□ 0.55
ATG4B-208ENST00000419606 MYOM2P54296 1465 aa18.46■□□□□ 0.54
ATG4B-208ENST00000419606 NCKAP5LQ9HCH0 1330 aa18.44■□□□□ 0.54
ATG4B-208ENST00000419606 SCAF11Q99590 1463 aaKnown RBP18.43■□□□□ 0.54
ATG4B-208ENST00000419606 NRXN1Q9ULB1 1477 aa18.43■□□□□ 0.54
ATG4B-208ENST00000419606 POLR1AO95602 1720 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-208ENST00000419606 PRAG1Q86YV5 1406 aa18.42■□□□□ 0.54
ATG4B-208ENST00000419606 VGFO15240 615 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-208ENST00000419606 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.42■□□□□ 0.54
ATG4B-208ENST00000419606 EID1Q9Y6B2 187 aa18.42■□□□□ 0.54
ATG4B-208ENST00000419606 IQGAP1P46940 1657 aa18.41■□□□□ 0.54
ATG4B-208ENST00000419606 ANKLE2Q86XL3 938 aa18.41■□□□□ 0.54
ATG4B-208ENST00000419606 NRXN3Q9Y4C0 1643 aa18.41■□□□□ 0.54
ATG4B-208ENST00000419606 STRCQ7RTU9 1775 aa18.4■□□□□ 0.54
ATG4B-208ENST00000419606 PIK3C2GO75747 1445 aa18.4■□□□□ 0.54
ATG4B-208ENST00000419606 HDGFP51858 240 aaKnown RBP18.39■□□□□ 0.53
ATG4B-208ENST00000419606 CFAP70Q5T0N1 1121 aa18.38■□□□□ 0.53
ATG4B-208ENST00000419606 PLEKHG1Q9ULL1 1385 aa18.38■□□□□ 0.53
ATG4B-208ENST00000419606 TRPM1Q7Z4N2 1603 aa18.38■□□□□ 0.53
ATG4B-208ENST00000419606 ZEB1P37275 1124 aaPredicted RBP18.37■□□□□ 0.53
ATG4B-208ENST00000419606 BCANQ96GW7 911 aa18.37■□□□□ 0.53
ATG4B-208ENST00000419606 STAC3Q96MF2 364 aa18.37■□□□□ 0.53
ATG4B-208ENST00000419606 SETD1AO15047 1707 aaKnown RBP18.36■□□□□ 0.53
ATG4B-208ENST00000419606 ALKQ9UM73 1620 aa18.36■□□□□ 0.53
ATG4B-208ENST00000419606 SETBP1Q9Y6X0 1596 aa18.36■□□□□ 0.53
ATG4B-208ENST00000419606 ADAMTS13Q76LX8 1427 aa18.35■□□□□ 0.53
ATG4B-208ENST00000419606 NBPF1Q3BBV0 1214 aa18.35■□□□□ 0.53
ATG4B-208ENST00000419606 SLC26A8Q96RN1 970 aa18.35■□□□□ 0.53
ATG4B-208ENST00000419606 MED14O60244 1454 aa18.34■□□□□ 0.53
ATG4B-208ENST00000419606 NPHP4O75161 1426 aaPredicted RBP18.34■□□□□ 0.53
ATG4B-208ENST00000419606 ASXL1Q8IXJ9 1541 aa18.33■□□□□ 0.53
ATG4B-208ENST00000419606 C14orf93Q9H972 538 aaKnown RBP18.33■□□□□ 0.52
ATG4B-208ENST00000419606 KIAA1210Q9ULL0 1709 aa18.32■□□□□ 0.52
ATG4B-208ENST00000419606 TMEM132EQ6IEE7 984 aa18.32■□□□□ 0.52
ATG4B-208ENST00000419606 RALGAPBQ86X10 1494 aa18.32■□□□□ 0.52
ATG4B-208ENST00000419606 LAMC1P11047 1609 aa18.31■□□□□ 0.52
ATG4B-208ENST00000419606 ADGRB1O14514 1584 aa18.3■□□□□ 0.52
ATG4B-208ENST00000419606 METP08581 1390 aa18.3■□□□□ 0.52
ATG4B-208ENST00000419606 ROCK2O75116 1388 aaKnown RBP18.28■□□□□ 0.52
ATG4B-208ENST00000419606 TBX22Q9Y458 520 aa18.27■□□□□ 0.52
ATG4B-208ENST00000419606 DIP2AQ14689 1571 aa18.26■□□□□ 0.51
ATG4B-208ENST00000419606 PTPRUQ92729 1446 aa18.26■□□□□ 0.51
ATG4B-208ENST00000419606 CARD11Q9BXL7 1154 aa18.24■□□□□ 0.51
ATG4B-208ENST00000419606 GPRASP1Q5JY77 1395 aa18.24■□□□□ 0.51
ATG4B-208ENST00000419606 ILDR1Q86SU0 546 aaPredicted RBP18.23■□□□□ 0.51
ATG4B-208ENST00000419606 STK26Q9P289 416 aa18.23■□□□□ 0.51
ATG4B-208ENST00000419606 CHD2O14647 1828 aaKnown RBP18.22■□□□□ 0.51
ATG4B-208ENST00000419606 YTHDC2Q9H6S0 1430 aaKnown RBP18.22■□□□□ 0.51
ATG4B-208ENST00000419606 TRAK1Q9UPV9 953 aa18.21■□□□□ 0.51
ATG4B-208ENST00000419606 STRCP1A6NGW2 1772 aa18.2■□□□□ 0.5
ATG4B-208ENST00000419606 LRPPRCP42704 1394 aaKnown RBP18.19■□□□□ 0.5
ATG4B-208ENST00000419606 XRN1Q8IZH2 1706 aaKnown RBP18.19■□□□□ 0.5
ATG4B-208ENST00000419606 AMOTL2Q9Y2J4 779 aa18.19■□□□□ 0.5
ATG4B-208ENST00000419606 ARHGEF28Q8N1W1 1705 aaKnown RBP18.18■□□□□ 0.5
ATG4B-208ENST00000419606 KNDC1Q76NI1 1749 aa18.18■□□□□ 0.5
ATG4B-208ENST00000419606 HIRIP3Q9BW71 556 aaPredicted RBP18.17■□□□□ 0.5
ATG4B-208ENST00000419606 PIK3R4Q99570 1358 aa18.17■□□□□ 0.5
ATG4B-208ENST00000419606 KCNA6P17658 529 aa18.16■□□□□ 0.5
ATG4B-208ENST00000419606 DMRT2Q9Y5R5 561 aa18.16■□□□□ 0.5
ATG4B-208ENST00000419606 NWD1Q149M9 1564 aa18.16■□□□□ 0.5
ATG4B-208ENST00000419606 ABCC11Q96J66 1382 aa18.16■□□□□ 0.5
ATG4B-208ENST00000419606 USP47Q96K76 1375 aa18.16■□□□□ 0.5
ATG4B-208ENST00000419606 ZNF335Q9H4Z2 1342 aaPredicted RBP18.15■□□□□ 0.5
ATG4B-208ENST00000419606 ROBO2Q9HCK4 1378 aa18.15■□□□□ 0.5
ATG4B-208ENST00000419606 PLEKHH1Q9ULM0 1364 aa18.15■□□□□ 0.5
ATG4B-208ENST00000419606 CPS1P31327 1500 aa18.14■□□□□ 0.49
ATG4B-208ENST00000419606 HSPA5P11021 654 aaKnown RBP18.14■□□□□ 0.49
ATG4B-208ENST00000419606 WAPLQ7Z5K2 1190 aa18.14■□□□□ 0.49
ATG4B-208ENST00000419606 TECPR2O15040 1411 aa18.14■□□□□ 0.49
ATG4B-208ENST00000419606 RBM33Q96EV2 1170 aaKnown RBP18.13■□□□□ 0.49
ATG4B-208ENST00000419606 DLC1Q96QB1 1528 aa18.13■□□□□ 0.49
ATG4B-208ENST00000419606 ST20-MTHFSA0A0A6YYL1 179 aa18.12■□□□□ 0.49
ATG4B-208ENST00000419606 SAFB2Q14151 953 aaKnown RBP eCLIP18.12■□□□□ 0.49
ATG4B-208ENST00000419606 PRAM1Q96QH2 718 aa18.12■□□□□ 0.49
ATG4B-208ENST00000419606 EIF4G2P78344 907 aaKnown RBP eCLIP18.11■□□□□ 0.49
ATG4B-208ENST00000419606 QRICH2Q9H0J4 1663 aa18.1■□□□□ 0.49
ATG4B-208ENST00000419606 PTCH1Q13635 1447 aa18.09■□□□□ 0.49
ATG4B-208ENST00000419606 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.09■□□□□ 0.49
ATG4B-208ENST00000419606 CENPJQ9HC77 1338 aaPredicted RBP18.08■□□□□ 0.49
ATG4B-208ENST00000419606 POGKQ9P215 609 aa18.08■□□□□ 0.48
ATG4B-208ENST00000419606 FAM135BQ49AJ0 1406 aa18.07■□□□□ 0.48
ATG4B-208ENST00000419606 SIRT1Q96EB6 747 aa18.07■□□□□ 0.48
ATG4B-208ENST00000419606 NKTRP30414 1462 aaKnown RBP18.07■□□□□ 0.48
ATG4B-208ENST00000419606 EIF3AQ14152 1382 aaKnown RBP18.06■□□□□ 0.48
ATG4B-208ENST00000419606 PROSER2Q86WR7 435 aaPredicted RBP18.06■□□□□ 0.48
ATG4B-208ENST00000419606 TESK2Q96S53 571 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms