RNA–Protein interactions for RNA: ENST00000416215.6

PTPN6-203, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 2

Gene PTPN6, Length 2,412 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-203ENST00000416215 IFT172Q9UG01 1749 aa18.43■□□□□ 0.54
PTPN6-203ENST00000416215 ZMYM4Q5VZL5 1548 aa18.43■□□□□ 0.54
PTPN6-203ENST00000416215 PER1O15534 1290 aaPredicted RBP18.42■□□□□ 0.54
PTPN6-203ENST00000416215 KIAA1210Q9ULL0 1709 aa18.41■□□□□ 0.54
PTPN6-203ENST00000416215 PANK3Q9H999 370 aa18.41■□□□□ 0.54
PTPN6-203ENST00000416215 SUPT16HQ9Y5B9 1047 aaKnown RBP18.4■□□□□ 0.54
PTPN6-203ENST00000416215 SYNMO15061 1565 aa18.39■□□□□ 0.53
PTPN6-203ENST00000416215 ARHGAP31Q2M1Z3 1444 aa18.39■□□□□ 0.53
PTPN6-203ENST00000416215 NRXN1Q9ULB1 1477 aa18.39■□□□□ 0.53
PTPN6-203ENST00000416215 IDI1Q13907 227 aa18.39■□□□□ 0.53
PTPN6-203ENST00000416215 NUTM2DQ5VT03 806 aaPredicted RBP18.39■□□□□ 0.53
PTPN6-203ENST00000416215 KIF13AQ9H1H9 1805 aa18.38■□□□□ 0.53
PTPN6-203ENST00000416215 RALBP1Q15311 655 aa18.37■□□□□ 0.53
PTPN6-203ENST00000416215 ZC3H13Q5T200 1668 aaKnown RBP18.37■□□□□ 0.53
PTPN6-203ENST00000416215 TMC1Q8TDI8 760 aa18.37■□□□□ 0.53
PTPN6-203ENST00000416215 PPLO60437 1756 aa18.36■□□□□ 0.53
PTPN6-203ENST00000416215 FBXO31Q5XUX0 539 aaPredicted RBP18.35■□□□□ 0.53
PTPN6-203ENST00000416215 EIF3AQ14152 1382 aaKnown RBP18.35■□□□□ 0.53
PTPN6-203ENST00000416215 RPGRIP1LQ68CZ1 1315 aa18.35■□□□□ 0.53
PTPN6-203ENST00000416215 MYBBP1AQ9BQG0 1328 aaKnown RBP18.35■□□□□ 0.53
PTPN6-203ENST00000416215 PIK3C2BO00750 1634 aa18.35■□□□□ 0.53
PTPN6-203ENST00000416215 CC2D1BQ5T0F9 858 aaKnown RBP18.34■□□□□ 0.53
PTPN6-203ENST00000416215 PNISRQ8TF01 805 aaKnown RBP18.34■□□□□ 0.53
PTPN6-203ENST00000416215 C14orf93Q9H972 538 aaKnown RBP18.34■□□□□ 0.53
PTPN6-203ENST00000416215 KTN1Q86UP2 1357 aaKnown RBP18.34■□□□□ 0.53
PTPN6-203ENST00000416215 PIK3C2GO75747 1445 aa18.33■□□□□ 0.53
PTPN6-203ENST00000416215 TMEM132EQ6IEE7 984 aa18.33■□□□□ 0.52
PTPN6-203ENST00000416215 MLECQ14165 292 aa18.32■□□□□ 0.52
PTPN6-203ENST00000416215 CDCA8Q53HL2 280 aa18.32■□□□□ 0.52
PTPN6-203ENST00000416215 SLC52A1Q9NWF4 448 aa18.32■□□□□ 0.52
PTPN6-203ENST00000416215 PARD3Q8TEW0 1356 aa18.32■□□□□ 0.52
PTPN6-203ENST00000416215 TRAK1Q9UPV9 953 aa18.31■□□□□ 0.52
PTPN6-203ENST00000416215 FKBP8Q14318 412 aa18.31■□□□□ 0.52
PTPN6-203ENST00000416215 SENP3Q9H4L4 574 aaPredicted RBP18.3■□□□□ 0.52
PTPN6-203ENST00000416215 PREX1Q8TCU6 1659 aa18.3■□□□□ 0.52
PTPN6-203ENST00000416215 ZBED9Q6R2W3 1325 aa18.29■□□□□ 0.52
PTPN6-203ENST00000416215 BRD4O60885 1362 aaPredicted RBP18.29■□□□□ 0.52
PTPN6-203ENST00000416215 VGFO15240 615 aaPredicted RBP18.29■□□□□ 0.52
PTPN6-203ENST00000416215 SENP3-EIF4A1A0A087X0R7 540 aa18.29■□□□□ 0.52
PTPN6-203ENST00000416215 REREQ9P2R6 1566 aa18.28■□□□□ 0.52
PTPN6-203ENST00000416215 AGLP35573 1532 aa18.28■□□□□ 0.52
PTPN6-203ENST00000416215 NEXMIFQ5QGS0 1516 aa18.28■□□□□ 0.52
PTPN6-203ENST00000416215 SETBP1Q9Y6X0 1596 aa18.28■□□□□ 0.52
PTPN6-203ENST00000416215 MYO5BQ9ULV0 1848 aa18.27■□□□□ 0.51
PTPN6-203ENST00000416215 NLRP13Q86W25 1043 aa18.27■□□□□ 0.51
PTPN6-203ENST00000416215 ERVK-7P63135 1459 aa18.26■□□□□ 0.51
PTPN6-203ENST00000416215 ADGRB1O14514 1584 aa18.26■□□□□ 0.51
PTPN6-203ENST00000416215 KNSTRNQ9Y448 316 aa18.25■□□□□ 0.51
PTPN6-203ENST00000416215 CENPJQ9HC77 1338 aaPredicted RBP18.25■□□□□ 0.51
PTPN6-203ENST00000416215 PPP6R1Q9UPN7 881 aa18.25■□□□□ 0.51
PTPN6-203ENST00000416215 SLC24A1O60721 1099 aa18.24■□□□□ 0.51
PTPN6-203ENST00000416215 BCANQ96GW7 911 aa18.24■□□□□ 0.51
PTPN6-203ENST00000416215 CLTCQ00610 1675 aaKnown RBP18.24■□□□□ 0.51
PTPN6-203ENST00000416215 TMEM131LA2VDJ0 1609 aa18.23■□□□□ 0.51
PTPN6-203ENST00000416215 KDM5AP29375 1690 aaKnown RBP18.23■□□□□ 0.51
PTPN6-203ENST00000416215 MYOM1P52179 1685 aa18.23■□□□□ 0.51
PTPN6-203ENST00000416215 NEFLP07196 543 aa18.23■□□□□ 0.51
PTPN6-203ENST00000416215 LRPPRCP42704 1394 aaKnown RBP18.22■□□□□ 0.51
PTPN6-203ENST00000416215 AMER1Q5JTC6 1135 aaPredicted RBP18.22■□□□□ 0.51
PTPN6-203ENST00000416215 MYO3AQ8NEV4 1616 aa18.22■□□□□ 0.51
PTPN6-203ENST00000416215 ARHGEF40Q8TER5 1519 aa18.21■□□□□ 0.51
PTPN6-203ENST00000416215 STAG3Q9UJ98 1225 aa18.21■□□□□ 0.51
PTPN6-203ENST00000416215 SBNO2Q9Y2G9 1366 aa18.2■□□□□ 0.5
PTPN6-203ENST00000416215 ZFYVE9O95405 1425 aa18.19■□□□□ 0.5
PTPN6-203ENST00000416215 CARD14Q9BXL6 1004 aa18.17■□□□□ 0.5
PTPN6-203ENST00000416215 STK26Q9P289 416 aa18.17■□□□□ 0.5
PTPN6-203ENST00000416215 QRICH2Q9H0J4 1663 aa18.17■□□□□ 0.5
PTPN6-203ENST00000416215 ESF1Q9H501 851 aaKnown RBP18.16■□□□□ 0.5
PTPN6-203ENST00000416215 ASXL1Q8IXJ9 1541 aa18.15■□□□□ 0.5
PTPN6-203ENST00000416215 PPP2R1AP30153 589 aa18.15■□□□□ 0.5
PTPN6-203ENST00000416215 IRX6P78412 446 aaPredicted RBP18.15■□□□□ 0.5
PTPN6-203ENST00000416215 SAFB2Q14151 953 aaKnown RBP eCLIP18.15■□□□□ 0.5
PTPN6-203ENST00000416215 ZMYM3Q14202 1370 aa18.14■□□□□ 0.49
PTPN6-203ENST00000416215 SPATA31D1Q6ZQQ2 1576 aa18.14■□□□□ 0.49
PTPN6-203ENST00000416215 SLC12A5Q9H2X9 1139 aa18.13■□□□□ 0.49
PTPN6-203ENST00000416215 ARHGEF28Q8N1W1 1705 aaKnown RBP18.12■□□□□ 0.49
PTPN6-203ENST00000416215 SALL2Q9Y467 1007 aaPredicted RBP18.12■□□□□ 0.49
PTPN6-203ENST00000416215 A2ML1A8K2U0 1454 aa18.11■□□□□ 0.49
PTPN6-203ENST00000416215 NPC1L1Q9UHC9 1359 aa18.1■□□□□ 0.49
PTPN6-203ENST00000416215 SMG6Q86US8 1419 aaKnown RBP18.09■□□□□ 0.49
PTPN6-203ENST00000416215 EVC2Q86UK5 1308 aa18.09■□□□□ 0.49
PTPN6-203ENST00000416215 CABP2Q9NPB3 220 aa18.08■□□□□ 0.49
PTPN6-203ENST00000416215 NUDCQ9Y266 331 aa18.08■□□□□ 0.49
PTPN6-203ENST00000416215 ALKQ9UM73 1620 aa18.07■□□□□ 0.48
PTPN6-203ENST00000416215 ADAMTS8Q9UP79 889 aa18.07■□□□□ 0.48
PTPN6-203ENST00000416215 RIMS2Q9UQ26 1411 aa18.07■□□□□ 0.48
PTPN6-203ENST00000416215 TULP4Q9NRJ4 1543 aa18.07■□□□□ 0.48
PTPN6-203ENST00000416215 PRAM1Q96QH2 718 aa18.07■□□□□ 0.48
PTPN6-203ENST00000416215 YTHDC2Q9H6S0 1430 aaKnown RBP18.06■□□□□ 0.48
PTPN6-203ENST00000416215 TRHP20396 242 aaPredicted RBP18.05■□□□□ 0.48
PTPN6-203ENST00000416215 NSD3Q9BZ95 1437 aa18.05■□□□□ 0.48
PTPN6-203ENST00000416215 POGKQ9P215 609 aa18.04■□□□□ 0.48
PTPN6-203ENST00000416215 PTPRMP28827 1452 aa18.04■□□□□ 0.48
PTPN6-203ENST00000416215 MINK1Q8N4C8 1332 aaPredicted RBP18.04■□□□□ 0.48
PTPN6-203ENST00000416215 PUS7Q96PZ0 661 aaKnown RBP18.03■□□□□ 0.48
PTPN6-203ENST00000416215 SRPK2P78362 688 aaKnown RBP18.02■□□□□ 0.47
PTPN6-203ENST00000416215 BLMP54132 1417 aaPredicted RBP18.02■□□□□ 0.47
PTPN6-203ENST00000416215 WDR43Q15061 677 aaKnown RBP eCLIP18.01■□□□□ 0.47
PTPN6-203ENST00000416215 TNRQ92752 1358 aa18.01■□□□□ 0.47
PTPN6-203ENST00000416215 CEBPAP49715 358 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms