RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-233ENST00000412685 PPP4R2Q9NY27 417 aa22.19■■□□□ 1.14
HCG18-233ENST00000412685 EIF3AQ14152 1382 aaKnown RBP22.19■■□□□ 1.14
HCG18-233ENST00000412685 CDCA8Q53HL2 280 aa22.18■■□□□ 1.14
HCG18-233ENST00000412685 NEO1Q92859 1461 aa22.18■■□□□ 1.14
HCG18-233ENST00000412685 ADGRF5Q8IZF2 1346 aa22.17■■□□□ 1.14
HCG18-233ENST00000412685 ABCA6Q8N139 1617 aa22.17■■□□□ 1.14
HCG18-233ENST00000412685 MROH2AA6NES4 1674 aa22.17■■□□□ 1.14
HCG18-233ENST00000412685 IFT172Q9UG01 1749 aa22.16■■□□□ 1.14
HCG18-233ENST00000412685 CFAP70Q5T0N1 1121 aa22.16■■□□□ 1.14
HCG18-233ENST00000412685 GGT6Q6P531 493 aa22.16■■□□□ 1.14
HCG18-233ENST00000412685 NPATQ14207 1427 aa22.16■■□□□ 1.14
HCG18-233ENST00000412685 SYNMO15061 1565 aa22.14■■□□□ 1.14
HCG18-233ENST00000412685 ADGRB3O60242 1522 aa22.14■■□□□ 1.13
HCG18-233ENST00000412685 RAPGEF3O95398 923 aa22.13■■□□□ 1.13
HCG18-233ENST00000412685 NRXN1Q9ULB1 1477 aa22.13■■□□□ 1.13
HCG18-233ENST00000412685 RNF123Q5XPI4 1314 aa22.12■■□□□ 1.13
HCG18-233ENST00000412685 KNSTRNQ9Y448 316 aa22.11■■□□□ 1.13
HCG18-233ENST00000412685 ABCC3O15438 1527 aa22.11■■□□□ 1.13
HCG18-233ENST00000412685 NOS1P29475 1434 aa22.09■■□□□ 1.13
HCG18-233ENST00000412685 CHGAP10645 457 aaKnown RBP22.08■■□□□ 1.13
HCG18-233ENST00000412685 CFAP65Q6ZU64 1925 aaKnown RBP22.08■■□□□ 1.13
HCG18-233ENST00000412685 INSRP06213 1382 aa22.08■■□□□ 1.13
HCG18-233ENST00000412685 MYOM1P52179 1685 aa22.08■■□□□ 1.13
HCG18-233ENST00000412685 AMER1Q5JTC6 1135 aaPredicted RBP22.08■■□□□ 1.12
HCG18-233ENST00000412685 SLC24A1O60721 1099 aa22.07■■□□□ 1.12
HCG18-233ENST00000412685 ZMYM4Q5VZL5 1548 aa22.07■■□□□ 1.12
HCG18-233ENST00000412685 KDM5AP29375 1690 aaKnown RBP22.07■■□□□ 1.12
HCG18-233ENST00000412685 DIP2CQ9Y2E4 1556 aa22.07■■□□□ 1.12
HCG18-233ENST00000412685 BLMP54132 1417 aaPredicted RBP22.05■■□□□ 1.12
HCG18-233ENST00000412685 ASXL1Q8IXJ9 1541 aa22.05■■□□□ 1.12
HCG18-233ENST00000412685 B4GALNT3Q6L9W6 998 aa22.04■■□□□ 1.12
HCG18-233ENST00000412685 CAMSAP1Q5T5Y3 1602 aa22.04■■□□□ 1.12
HCG18-233ENST00000412685 ERVK-7P63135 1459 aa22.04■■□□□ 1.12
HCG18-233ENST00000412685 RBM19Q9Y4C8 960 aaKnown RBP22.04■■□□□ 1.12
HCG18-233ENST00000412685 RICTORQ6R327 1708 aa22.04■■□□□ 1.12
HCG18-233ENST00000412685 PPLO60437 1756 aa22.03■■□□□ 1.12
HCG18-233ENST00000412685 SETBP1Q9Y6X0 1596 aa22.03■■□□□ 1.12
HCG18-233ENST00000412685 SALL2Q9Y467 1007 aaPredicted RBP22.03■■□□□ 1.12
HCG18-233ENST00000412685 PDE3BQ13370 1112 aa22.02■■□□□ 1.12
HCG18-233ENST00000412685 PIK3C2GO75747 1445 aa22.02■■□□□ 1.12
HCG18-233ENST00000412685 PPP2R1AP30153 589 aa22.02■■□□□ 1.12
HCG18-233ENST00000412685 MYO3AQ8NEV4 1616 aa22.02■■□□□ 1.11
HCG18-233ENST00000412685 NPC1L1Q9UHC9 1359 aa22.01■■□□□ 1.11
HCG18-233ENST00000412685 SBNO2Q9Y2G9 1366 aa22.01■■□□□ 1.11
HCG18-233ENST00000412685 RPGRIP1LQ68CZ1 1315 aa22■■□□□ 1.11
HCG18-233ENST00000412685 SIGLEC1Q9BZZ2 1709 aa22■■□□□ 1.11
HCG18-233ENST00000412685 CYB5RLQ6IPT4 315 aa21.99■■□□□ 1.11
HCG18-233ENST00000412685 C14orf93Q9H972 538 aaKnown RBP21.99■■□□□ 1.11
HCG18-233ENST00000412685 GLI2P10070 1586 aa21.97■■□□□ 1.11
HCG18-233ENST00000412685 CENPJQ9HC77 1338 aaPredicted RBP21.97■■□□□ 1.11
HCG18-233ENST00000412685 YEATS2Q9ULM3 1422 aa21.97■■□□□ 1.11
HCG18-233ENST00000412685 PIK3C2BO00750 1634 aa21.97■■□□□ 1.11
HCG18-233ENST00000412685 ADGRB1O14514 1584 aa21.96■■□□□ 1.11
HCG18-233ENST00000412685 ARHGAP31Q2M1Z3 1444 aa21.96■■□□□ 1.11
HCG18-233ENST00000412685 ADAMTS8Q9UP79 889 aa21.95■■□□□ 1.11
HCG18-233ENST00000412685 ZC3H13Q5T200 1668 aaKnown RBP21.94■■□□□ 1.1
HCG18-233ENST00000412685 RCAN3Q9UKA8 241 aa21.94■■□□□ 1.1
HCG18-233ENST00000412685 TRAK1Q9UPV9 953 aa21.94■■□□□ 1.1
HCG18-233ENST00000412685 CDCA7LQ96GN5 454 aa21.93■■□□□ 1.1
HCG18-233ENST00000412685 WDR43Q15061 677 aaKnown RBP eCLIP21.92■■□□□ 1.1
HCG18-233ENST00000412685 RRP1P56182 461 aaKnown RBP21.92■■□□□ 1.1
HCG18-233ENST00000412685 TMEM132EQ6IEE7 984 aa21.91■■□□□ 1.1
HCG18-233ENST00000412685 CARD14Q9BXL6 1004 aa21.91■■□□□ 1.1
HCG18-233ENST00000412685 NEXMIFQ5QGS0 1516 aa21.9■■□□□ 1.1
HCG18-233ENST00000412685 QRICH2Q9H0J4 1663 aa21.89■■□□□ 1.09
HCG18-233ENST00000412685 VGFO15240 615 aaPredicted RBP21.89■■□□□ 1.09
HCG18-233ENST00000412685 CCDC136Q96JN2 1154 aa21.89■■□□□ 1.09
HCG18-233ENST00000412685 RIMBP3CA6NJZ7 1639 aa21.88■■□□□ 1.09
HCG18-233ENST00000412685 RIMBP3BA6NNM3 1639 aa21.88■■□□□ 1.09
HCG18-233ENST00000412685 RIMBP3Q9UFD9 1639 aa21.88■■□□□ 1.09
HCG18-233ENST00000412685 IDI1Q13907 227 aa21.87■■□□□ 1.09
HCG18-233ENST00000412685 FAM69CQ0P6D2 419 aa21.87■■□□□ 1.09
HCG18-233ENST00000412685 NUTM2DQ5VT03 806 aaPredicted RBP21.87■■□□□ 1.09
HCG18-233ENST00000412685 SLC52A1Q9NWF4 448 aa21.86■■□□□ 1.09
HCG18-233ENST00000412685 DIP2BQ9P265 1576 aa21.85■■□□□ 1.09
HCG18-233ENST00000412685 PREX1Q8TCU6 1659 aa21.82■■□□□ 1.08
HCG18-233ENST00000412685 PLEKHH1Q9ULM0 1364 aa21.82■■□□□ 1.08
HCG18-233ENST00000412685 ZFYVE9O95405 1425 aa21.81■■□□□ 1.08
HCG18-233ENST00000412685 NSD3Q9BZ95 1437 aa21.8■■□□□ 1.08
HCG18-233ENST00000412685 SLC12A5Q9H2X9 1139 aa21.8■■□□□ 1.08
HCG18-233ENST00000412685 ARHGEF28Q8N1W1 1705 aaKnown RBP21.79■■□□□ 1.08
HCG18-233ENST00000412685 ZNF521Q96K83 1311 aa21.78■■□□□ 1.08
HCG18-233ENST00000412685 EXOC6Q8TAG9 804 aa21.78■■□□□ 1.08
HCG18-233ENST00000412685 ANP32EQ9BTT0 268 aa21.78■■□□□ 1.08
HCG18-233ENST00000412685 TMEM131LA2VDJ0 1609 aa21.78■■□□□ 1.08
HCG18-233ENST00000412685 MYO5BQ9ULV0 1848 aa21.77■■□□□ 1.08
HCG18-233ENST00000412685 TSPOAP1O95153 1857 aa21.76■■□□□ 1.07
HCG18-233ENST00000412685 EVC2Q86UK5 1308 aa21.76■■□□□ 1.07
HCG18-233ENST00000412685 PUS7Q96PZ0 661 aaKnown RBP21.76■■□□□ 1.07
HCG18-233ENST00000412685 TULP4Q9NRJ4 1543 aa21.75■■□□□ 1.07
HCG18-233ENST00000412685 CCDC146Q8IYE0 955 aa21.75■■□□□ 1.07
HCG18-233ENST00000412685 FANCIQ9NVI1 1328 aa21.75■■□□□ 1.07
HCG18-233ENST00000412685 FBXO31Q5XUX0 539 aaPredicted RBP21.74■■□□□ 1.07
HCG18-233ENST00000412685 GOLGA2Q08379 1002 aa21.74■■□□□ 1.07
HCG18-233ENST00000412685 DUSP27Q5VZP5 1158 aa21.73■■□□□ 1.07
HCG18-233ENST00000412685 POLR3AO14802 1390 aaPredicted RBP21.73■■□□□ 1.07
HCG18-233ENST00000412685 REREQ9P2R6 1566 aa21.73■■□□□ 1.07
HCG18-233ENST00000412685 MORC1Q86VD1 984 aa21.73■■□□□ 1.07
HCG18-233ENST00000412685 USP32Q8NFA0 1604 aa21.72■■□□□ 1.07
HCG18-233ENST00000412685 AGLP35573 1532 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms