RNA–Protein interactions for RNA: ENST00000412413.1

AC004009.1-201, humanhuman

TSL 5 BASIC

Gene AC004009.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004009.1-201ENST00000412413 IDI1Q13907 227 aa12.73□□□□□ -0.37
AC004009.1-201ENST00000412413 RBM33Q96EV2 1170 aaKnown RBP12.73□□□□□ -0.37
AC004009.1-201ENST00000412413 ZC3H13Q5T200 1668 aaKnown RBP12.73□□□□□ -0.37
AC004009.1-201ENST00000412413 CEP152O94986 1710 aa12.72□□□□□ -0.37
AC004009.1-201ENST00000412413 SLC26A8Q96RN1 970 aa12.72□□□□□ -0.37
AC004009.1-201ENST00000412413 PTPN23Q9H3S7 1636 aa12.72□□□□□ -0.37
AC004009.1-201ENST00000412413 MED1Q15648 1581 aaPredicted RBP12.72□□□□□ -0.37
AC004009.1-201ENST00000412413 ARHGAP31Q2M1Z3 1444 aa12.71□□□□□ -0.38
AC004009.1-201ENST00000412413 TMEM2Q9UHN6 1383 aa12.7□□□□□ -0.38
AC004009.1-201ENST00000412413 PRDM15P57071 1507 aaPredicted RBP12.69□□□□□ -0.38
AC004009.1-201ENST00000412413 PROSER2Q86WR7 435 aaPredicted RBP12.69□□□□□ -0.38
AC004009.1-201ENST00000412413 ARHGAP23Q9P227 1491 aa12.68□□□□□ -0.38
AC004009.1-201ENST00000412413 CHGAP10645 457 aaKnown RBP12.68□□□□□ -0.38
AC004009.1-201ENST00000412413 ALKQ9UM73 1620 aa12.68□□□□□ -0.38
AC004009.1-201ENST00000412413 CFAP65Q6ZU64 1925 aaKnown RBP12.68□□□□□ -0.38
AC004009.1-201ENST00000412413 PPP1R15AO75807 674 aaPredicted RBP12.67□□□□□ -0.38
AC004009.1-201ENST00000412413 UBR1Q8IWV7 1749 aa12.67□□□□□ -0.38
AC004009.1-201ENST00000412413 TMEM94Q12767 1356 aa12.67□□□□□ -0.38
AC004009.1-201ENST00000412413 SLIT1O75093 1534 aa12.67□□□□□ -0.38
AC004009.1-201ENST00000412413 KCNA6P17658 529 aa12.66□□□□□ -0.38
AC004009.1-201ENST00000412413 STRCP1A6NGW2 1772 aa12.66□□□□□ -0.38
AC004009.1-201ENST00000412413 ITGAEP38570 1179 aa12.65□□□□□ -0.38
AC004009.1-201ENST00000412413 EFCAB6Q5THR3 1501 aa12.65□□□□□ -0.38
AC004009.1-201ENST00000412413 PIK3C2BO00750 1634 aa12.65□□□□□ -0.38
AC004009.1-201ENST00000412413 NUTM2DQ5VT03 806 aaPredicted RBP12.64□□□□□ -0.39
AC004009.1-201ENST00000412413 SYNMO15061 1565 aa12.64□□□□□ -0.39
AC004009.1-201ENST00000412413 CROCC2H7BZ55 1655 aa12.64□□□□□ -0.39
AC004009.1-201ENST00000412413 PPARGC1BQ86YN6 1023 aaKnown RBP12.63□□□□□ -0.39
AC004009.1-201ENST00000412413 SLC52A1Q9NWF4 448 aa12.63□□□□□ -0.39
AC004009.1-201ENST00000412413 ANKRD50Q9ULJ7 1429 aa12.62□□□□□ -0.39
AC004009.1-201ENST00000412413 C14orf37Q86TY3 774 aa12.62□□□□□ -0.39
AC004009.1-201ENST00000412413 LMTK2Q8IWU2 1503 aa12.62□□□□□ -0.39
AC004009.1-201ENST00000412413 NOS1P29475 1434 aa12.62□□□□□ -0.39
AC004009.1-201ENST00000412413 FKBP8Q14318 412 aa12.61□□□□□ -0.39
AC004009.1-201ENST00000412413 HDGFP51858 240 aaKnown RBP12.6□□□□□ -0.39
AC004009.1-201ENST00000412413 RGS17Q9UGC6 210 aaPredicted RBP12.59□□□□□ -0.39
AC004009.1-201ENST00000412413 ADGRL2O95490 1459 aa12.59□□□□□ -0.39
AC004009.1-201ENST00000412413 MSH6P52701 1360 aa12.58□□□□□ -0.4
AC004009.1-201ENST00000412413 ADGRB3O60242 1522 aa12.58□□□□□ -0.4
AC004009.1-201ENST00000412413 FAM135BQ49AJ0 1406 aa12.58□□□□□ -0.4
AC004009.1-201ENST00000412413 RIMS2Q9UQ26 1411 aa12.58□□□□□ -0.4
AC004009.1-201ENST00000412413 SPDYE4A6NLX3 237 aa12.57□□□□□ -0.4
AC004009.1-201ENST00000412413 SLAIN2Q9P270 581 aa12.57□□□□□ -0.4
AC004009.1-201ENST00000412413 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.56□□□□□ -0.4
AC004009.1-201ENST00000412413 PLEKHG1Q9ULL1 1385 aa12.56□□□□□ -0.4
AC004009.1-201ENST00000412413 NUP155O75694 1391 aa12.55□□□□□ -0.4
AC004009.1-201ENST00000412413 TET3O43151 1660 aa12.54□□□□□ -0.4
AC004009.1-201ENST00000412413 RPRD2Q5VT52 1461 aaKnown RBP12.54□□□□□ -0.4
AC004009.1-201ENST00000412413 POTEAQ6S8J7 498 aa12.54□□□□□ -0.4
AC004009.1-201ENST00000412413 SPDYE2BA6NHP3 402 aa12.53□□□□□ -0.4
AC004009.1-201ENST00000412413 SPDYE6P0CI01 402 aa12.53□□□□□ -0.4
AC004009.1-201ENST00000412413 SPDYE2Q495Y8 402 aa12.53□□□□□ -0.4
AC004009.1-201ENST00000412413 TBX22Q9Y458 520 aa12.53□□□□□ -0.4
AC004009.1-201ENST00000412413 ZFYVE9O95405 1425 aa12.53□□□□□ -0.4
AC004009.1-201ENST00000412413 NKTRP30414 1462 aaKnown RBP12.53□□□□□ -0.4
AC004009.1-201ENST00000412413 ZNF326Q5BKZ1 582 aaKnown RBP12.52□□□□□ -0.41
AC004009.1-201ENST00000412413 RBM42Q9BTD8 480 aaKnown RBP12.52□□□□□ -0.41
AC004009.1-201ENST00000412413 ZNF692Q9BU19 519 aaPredicted RBP12.52□□□□□ -0.41
AC004009.1-201ENST00000412413 ATF3P18847 181 aa12.51□□□□□ -0.41
AC004009.1-201ENST00000412413 MEX3CQ5U5Q3 659 aaKnown RBP12.51□□□□□ -0.41
AC004009.1-201ENST00000412413 XIRP1Q702N8 1843 aaKnown RBP12.51□□□□□ -0.41
AC004009.1-201ENST00000412413 AMOTL2Q9Y2J4 779 aa12.5□□□□□ -0.41
AC004009.1-201ENST00000412413 ROBO1Q9Y6N7 1651 aa12.5□□□□□ -0.41
AC004009.1-201ENST00000412413 KDM5AP29375 1690 aaKnown RBP12.49□□□□□ -0.41
AC004009.1-201ENST00000412413 ROCK1Q13464 1354 aa12.49□□□□□ -0.41
AC004009.1-201ENST00000412413 JCADQ9P266 1359 aa12.49□□□□□ -0.41
AC004009.1-201ENST00000412413 NWD1Q149M9 1564 aa12.48□□□□□ -0.41
AC004009.1-201ENST00000412413 CADPS2Q86UW7 1296 aa12.48□□□□□ -0.41
AC004009.1-201ENST00000412413 C19orf44Q9H6X5 657 aa12.48□□□□□ -0.41
AC004009.1-201ENST00000412413 ADAMTS13Q76LX8 1427 aa12.47□□□□□ -0.41
AC004009.1-201ENST00000412413 NUTM2BA6NNL0 878 aaPredicted RBP12.47□□□□□ -0.41
AC004009.1-201ENST00000412413 NUTM2EB1AL46 878 aaPredicted RBP12.47□□□□□ -0.41
AC004009.1-201ENST00000412413 NUTM2AQ8IVF1 878 aaPredicted RBP12.47□□□□□ -0.41
AC004009.1-201ENST00000412413 TMEM131LA2VDJ0 1609 aa12.47□□□□□ -0.41
AC004009.1-201ENST00000412413 GCC2Q8IWJ2 1684 aa12.46□□□□□ -0.41
AC004009.1-201ENST00000412413 UNC13BO14795 1591 aa12.45□□□□□ -0.42
AC004009.1-201ENST00000412413 TRIM52Q96A61 297 aa12.44□□□□□ -0.42
AC004009.1-201ENST00000412413 BRINP3Q76B58 766 aa12.43□□□□□ -0.42
AC004009.1-201ENST00000412413 PTPRUQ92729 1446 aa12.43□□□□□ -0.42
AC004009.1-201ENST00000412413 NCOA3Q9Y6Q9 1424 aa12.43□□□□□ -0.42
AC004009.1-201ENST00000412413 PIK3R4Q99570 1358 aa12.43□□□□□ -0.42
AC004009.1-201ENST00000412413 PHLPP1O60346 1717 aa12.42□□□□□ -0.42
AC004009.1-201ENST00000412413 E9PCH4 1651 aa12.42□□□□□ -0.42
AC004009.1-201ENST00000412413 MYO5BQ9ULV0 1848 aa12.41□□□□□ -0.42
AC004009.1-201ENST00000412413 SPATA31A6Q5VVP1 1343 aa12.41□□□□□ -0.42
AC004009.1-201ENST00000412413 DDX17Q92841 729 aaKnown RBP12.41□□□□□ -0.42
AC004009.1-201ENST00000412413 SSUH2Q9Y2M2 353 aa12.41□□□□□ -0.42
AC004009.1-201ENST00000412413 TRPM2O94759 1503 aa12.41□□□□□ -0.42
AC004009.1-201ENST00000412413 METP08581 1390 aa12.41□□□□□ -0.42
AC004009.1-201ENST00000412413 IQGAP3Q86VI3 1631 aa12.4□□□□□ -0.42
AC004009.1-201ENST00000412413 ZNF772Q68DY9 489 aaPredicted RBP12.4□□□□□ -0.42
AC004009.1-201ENST00000412413 LRP6O75581 1613 aa12.39□□□□□ -0.43
AC004009.1-201ENST00000412413 CHD2O14647 1828 aaKnown RBP12.39□□□□□ -0.43
AC004009.1-201ENST00000412413 DIP2AQ14689 1571 aa12.39□□□□□ -0.43
AC004009.1-201ENST00000412413 RXRBP28702 533 aa12.37□□□□□ -0.43
AC004009.1-201ENST00000412413 COL16A1Q07092 1604 aaPredicted RBP12.37□□□□□ -0.43
AC004009.1-201ENST00000412413 AKT1S1Q96B36 256 aa12.36□□□□□ -0.43
AC004009.1-201ENST00000412413 C8orf37Q96NL8 207 aa12.36□□□□□ -0.43
AC004009.1-201ENST00000412413 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.36□□□□□ -0.43
AC004009.1-201ENST00000412413 LRRC59Q96AG4 307 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms