RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 RALGAPBQ86X10 1494 aa4.76□□□□□ -1.65
RGPD3-202ENST00000409886 EFCAB2Q5VUJ9 269 aa4.76□□□□□ -1.65
RGPD3-202ENST00000409886 RREB1Q92766 1687 aa4.76□□□□□ -1.65
RGPD3-202ENST00000409886 RGPD3A6NKT7 1758 aaPredicted RBP4.76□□□□□ -1.65
RGPD3-202ENST00000409886 RGPD4Q7Z3J3 1758 aa4.76□□□□□ -1.65
RGPD3-202ENST00000409886 SCAF11Q99590 1463 aaKnown RBP4.76□□□□□ -1.65
RGPD3-202ENST00000409886 NEXMIFQ5QGS0 1516 aa4.76□□□□□ -1.65
RGPD3-202ENST00000409886 A2MP01023 1474 aa4.75□□□□□ -1.65
RGPD3-202ENST00000409886 ANKLE2Q86XL3 938 aa4.75□□□□□ -1.65
RGPD3-202ENST00000409886 RTEL1-TNFRSF6BF6WH68 1400 aa4.75□□□□□ -1.65
RGPD3-202ENST00000409886 KIAA1107Q9UPP5 1409 aa4.75□□□□□ -1.65
RGPD3-202ENST00000409886 SALL2Q9Y467 1007 aaPredicted RBP4.75□□□□□ -1.65
RGPD3-202ENST00000409886 SETD5Q9C0A6 1442 aa4.75□□□□□ -1.65
RGPD3-202ENST00000409886 BLMP54132 1417 aaPredicted RBP4.75□□□□□ -1.65
RGPD3-202ENST00000409886 TET3O43151 1660 aa4.74□□□□□ -1.65
RGPD3-202ENST00000409886 DCCP43146 1447 aa4.74□□□□□ -1.65
RGPD3-202ENST00000409886 PTCH1Q13635 1447 aa4.74□□□□□ -1.65
RGPD3-202ENST00000409886 WDR87Q6ZQQ6 2873 aa4.74□□□□□ -1.65
RGPD3-202ENST00000409886 CLIP1P30622 1438 aa4.74□□□□□ -1.65
RGPD3-202ENST00000409886 ADGRB2O60241 1585 aa4.74□□□□□ -1.65
RGPD3-202ENST00000409886 HNRNPUL2Q1KMD3 747 aaKnown RBP4.74□□□□□ -1.65
RGPD3-202ENST00000409886 SYCP2Q9BX26 1530 aa4.74□□□□□ -1.65
RGPD3-202ENST00000409886 ATRNO75882 1429 aa4.74□□□□□ -1.65
RGPD3-202ENST00000409886 PLEKHD1A6NEE1 506 aa4.74□□□□□ -1.65
RGPD3-202ENST00000409886 MLECQ14165 292 aa4.74□□□□□ -1.65
RGPD3-202ENST00000409886 THEMISQ8N1K5 641 aaPredicted RBP4.73□□□□□ -1.65
RGPD3-202ENST00000409886 DISP2A7MBM2 1401 aa4.73□□□□□ -1.65
RGPD3-202ENST00000409886 PAK3O75914 559 aaPredicted RBP4.73□□□□□ -1.65
RGPD3-202ENST00000409886 RBM6P78332 1123 aaKnown RBP4.73□□□□□ -1.65
RGPD3-202ENST00000409886 CCDC184Q52MB2 194 aa4.73□□□□□ -1.65
RGPD3-202ENST00000409886 ANP32EQ9BTT0 268 aa4.73□□□□□ -1.65
RGPD3-202ENST00000409886 NINLQ9Y2I6 1382 aa4.73□□□□□ -1.65
RGPD3-202ENST00000409886 NCOA2Q15596 1464 aa4.73□□□□□ -1.65
RGPD3-202ENST00000409886 CHD4Q14839 1912 aa4.73□□□□□ -1.65
RGPD3-202ENST00000409886 TROQ12816 1431 aaPredicted RBP4.72□□□□□ -1.65
RGPD3-202ENST00000409886 TNS1Q9HBL0 1735 aaKnown RBP4.72□□□□□ -1.65
RGPD3-202ENST00000409886 IRX6P78412 446 aaPredicted RBP4.72□□□□□ -1.65
RGPD3-202ENST00000409886 MIA2Q96PC5 1412 aa4.71□□□□□ -1.65
RGPD3-202ENST00000409886 ADGRB3O60242 1522 aa4.71□□□□□ -1.65
RGPD3-202ENST00000409886 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.71□□□□□ -1.65
RGPD3-202ENST00000409886 NWD2Q9ULI1 1742 aa4.71□□□□□ -1.66
RGPD3-202ENST00000409886 SIN3AQ96ST3 1273 aa4.71□□□□□ -1.66
RGPD3-202ENST00000409886 RBM19Q9Y4C8 960 aaKnown RBP4.71□□□□□ -1.66
RGPD3-202ENST00000409886 MAST1Q9Y2H9 1570 aa4.71□□□□□ -1.66
RGPD3-202ENST00000409886 CCDC18Q5T9S5 1454 aa4.71□□□□□ -1.66
RGPD3-202ENST00000409886 RPRD2Q5VT52 1461 aaKnown RBP4.71□□□□□ -1.66
RGPD3-202ENST00000409886 ZNF316A6NFI3 1004 aaPredicted RBP4.7□□□□□ -1.66
RGPD3-202ENST00000409886 SKAP1Q86WV1 359 aa4.7□□□□□ -1.66
RGPD3-202ENST00000409886 IL27Q8NEV9 243 aa4.7□□□□□ -1.66
RGPD3-202ENST00000409886 CFAP54Q96N23 3096 aa4.7□□□□□ -1.66
RGPD3-202ENST00000409886 BRWD3Q6RI45 1802 aa4.7□□□□□ -1.66
RGPD3-202ENST00000409886 NGLY1Q96IV0 654 aa4.7□□□□□ -1.66
RGPD3-202ENST00000409886 ERVK-7P63135 1459 aa4.7□□□□□ -1.66
RGPD3-202ENST00000409886 E9PCH4 1651 aa4.69□□□□□ -1.66
RGPD3-202ENST00000409886 TRIM52Q96A61 297 aa4.69□□□□□ -1.66
RGPD3-202ENST00000409886 ARHGAP35Q9NRY4 1499 aa4.69□□□□□ -1.66
RGPD3-202ENST00000409886 YY1P25490 414 aa4.69□□□□□ -1.66
RGPD3-202ENST00000409886 ASXL1Q8IXJ9 1541 aa4.69□□□□□ -1.66
RGPD3-202ENST00000409886 NUP188Q5SRE5 1749 aa4.69□□□□□ -1.66
RGPD3-202ENST00000409886 TUBGCP6Q96RT7 1819 aa4.68□□□□□ -1.66
RGPD3-202ENST00000409886 MSH6P52701 1360 aa4.68□□□□□ -1.66
RGPD3-202ENST00000409886 PLPPR3Q6T4P5 718 aa4.68□□□□□ -1.66
RGPD3-202ENST00000409886 CEP152O94986 1710 aa4.68□□□□□ -1.66
RGPD3-202ENST00000409886 ARHGAP31Q2M1Z3 1444 aa4.68□□□□□ -1.66
RGPD3-202ENST00000409886 ZEB1P37275 1124 aaPredicted RBP4.68□□□□□ -1.66
RGPD3-202ENST00000409886 CASZ1Q86V15 1759 aa4.68□□□□□ -1.66
RGPD3-202ENST00000409886 COL6A3P12111 3177 aa4.68□□□□□ -1.66
RGPD3-202ENST00000409886 NALCNQ8IZF0 1738 aa4.67□□□□□ -1.66
RGPD3-202ENST00000409886 PARD3Q8TEW0 1356 aa4.67□□□□□ -1.66
RGPD3-202ENST00000409886 COL24A1Q17RW2 1714 aa4.67□□□□□ -1.66
RGPD3-202ENST00000409886 MEX3CQ5U5Q3 659 aaKnown RBP4.67□□□□□ -1.66
RGPD3-202ENST00000409886 PIK3C2BO00750 1634 aa4.67□□□□□ -1.66
RGPD3-202ENST00000409886 ARHGEF5Q12774 1597 aa4.67□□□□□ -1.66
RGPD3-202ENST00000409886 XRN1Q8IZH2 1706 aaKnown RBP4.66□□□□□ -1.66
RGPD3-202ENST00000409886 EYSQ5T1H1 3165 aa4.66□□□□□ -1.66
RGPD3-202ENST00000409886 EHBP1L1Q8N3D4 1523 aa4.66□□□□□ -1.66
RGPD3-202ENST00000409886 PIK3R4Q99570 1358 aa4.66□□□□□ -1.66
RGPD3-202ENST00000409886 KCNA6P17658 529 aa4.66□□□□□ -1.66
RGPD3-202ENST00000409886 FMN1Q68DA7 1419 aa4.66□□□□□ -1.66
RGPD3-202ENST00000409886 TMEM94Q12767 1356 aa4.65□□□□□ -1.66
RGPD3-202ENST00000409886 AFF2P51816 1311 aa4.65□□□□□ -1.66
RGPD3-202ENST00000409886 RANGAP1P46060 587 aaPredicted RBP4.65□□□□□ -1.66
RGPD3-202ENST00000409886 FYCO1Q9BQS8 1478 aa4.65□□□□□ -1.66
RGPD3-202ENST00000409886 KANK4Q5T7N3 995 aaPredicted RBP4.65□□□□□ -1.67
RGPD3-202ENST00000409886 USP32Q8NFA0 1604 aa4.65□□□□□ -1.67
RGPD3-202ENST00000409886 REV3LO60673 3130 aa4.65□□□□□ -1.67
RGPD3-202ENST00000409886 TMEM131LA2VDJ0 1609 aa4.65□□□□□ -1.67
RGPD3-202ENST00000409886 LMTK2Q8IWU2 1503 aa4.65□□□□□ -1.67
RGPD3-202ENST00000409886 DCAF8L1A6NGE4 600 aa4.64□□□□□ -1.67
RGPD3-202ENST00000409886 EFCAB6Q5THR3 1501 aa4.64□□□□□ -1.67
RGPD3-202ENST00000409886 DHX29Q7Z478 1369 aaKnown RBP4.64□□□□□ -1.67
RGPD3-202ENST00000409886 MKI67P46013 3256 aaKnown RBP4.64□□□□□ -1.67
RGPD3-202ENST00000409886 GLI3P10071 1580 aa4.64□□□□□ -1.67
RGPD3-202ENST00000409886 C1QTNF8P60827 252 aa4.64□□□□□ -1.67
RGPD3-202ENST00000409886 RTN4Q9NQC3 1192 aaKnown RBP4.64□□□□□ -1.67
RGPD3-202ENST00000409886 AATKQ6ZMQ8 1374 aa4.64□□□□□ -1.67
RGPD3-202ENST00000409886 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.64□□□□□ -1.67
RGPD3-202ENST00000409886 SMG1Q96Q15 3661 aaKnown RBP4.64□□□□□ -1.67
RGPD3-202ENST00000409886 CDK11AQ9UQ88 783 aaPredicted RBP4.64□□□□□ -1.67
RGPD3-202ENST00000409886 TRPM2O94759 1503 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms