RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 CDK11BP21127 795 aaKnown RBP9.59□□□□□ -0.87
SH3D19-203ENST00000409598 SPG7Q9UQ90 795 aa9.59□□□□□ -0.87
SH3D19-203ENST00000409598 KTN1Q86UP2 1357 aaKnown RBP9.59□□□□□ -0.87
SH3D19-203ENST00000409598 ZNF518AQ6AHZ1 1483 aa9.58□□□□□ -0.88
SH3D19-203ENST00000409598 PLEKHO1Q53GL0 409 aaPredicted RBP9.58□□□□□ -0.88
SH3D19-203ENST00000409598 NPHP3Q7Z494 1330 aa9.58□□□□□ -0.88
SH3D19-203ENST00000409598 ANKRD30BQ9BXX2 1392 aa9.58□□□□□ -0.88
SH3D19-203ENST00000409598 WDR97A6NE52 1622 aa9.58□□□□□ -0.88
SH3D19-203ENST00000409598 KCNJ4P48050 445 aa9.58□□□□□ -0.88
SH3D19-203ENST00000409598 HSP90AA1P07900 732 aaKnown RBP9.58□□□□□ -0.88
SH3D19-203ENST00000409598 C16orf71Q8IYS4 520 aaPredicted RBP9.58□□□□□ -0.88
SH3D19-203ENST00000409598 HFM1A2PYH4 1435 aa9.58□□□□□ -0.88
SH3D19-203ENST00000409598 EIF4G3O43432 1585 aaKnown RBP9.58□□□□□ -0.88
SH3D19-203ENST00000409598 FGD6Q6ZV73 1430 aa9.57□□□□□ -0.88
SH3D19-203ENST00000409598 NEXNQ0ZGT2 675 aa9.57□□□□□ -0.88
SH3D19-203ENST00000409598 NCKAP5LQ9HCH0 1330 aa9.57□□□□□ -0.88
SH3D19-203ENST00000409598 ARHGEF11O15085 1522 aa9.57□□□□□ -0.88
SH3D19-203ENST00000409598 PRAM1Q96QH2 718 aa9.56□□□□□ -0.88
SH3D19-203ENST00000409598 KIF21AQ7Z4S6 1674 aa9.56□□□□□ -0.88
SH3D19-203ENST00000409598 PHF8Q9UPP1 1060 aa9.56□□□□□ -0.88
SH3D19-203ENST00000409598 UHRF1BP1LA0JNW5 1464 aa9.56□□□□□ -0.88
SH3D19-203ENST00000409598 RBM42Q9BTD8 480 aaKnown RBP9.56□□□□□ -0.88
SH3D19-203ENST00000409598 ANP32AP39687 249 aaKnown RBP9.56□□□□□ -0.88
SH3D19-203ENST00000409598 ZNF772Q68DY9 489 aaPredicted RBP9.56□□□□□ -0.88
SH3D19-203ENST00000409598 CTDP1Q9Y5B0 961 aaPredicted RBP9.55□□□□□ -0.88
SH3D19-203ENST00000409598 RTEL1-TNFRSF6BF6WH68 1400 aa9.55□□□□□ -0.88
SH3D19-203ENST00000409598 DHX29Q7Z478 1369 aaKnown RBP9.55□□□□□ -0.88
SH3D19-203ENST00000409598 IPO8O15397 1037 aaKnown RBP9.55□□□□□ -0.88
SH3D19-203ENST00000409598 BAG6P46379 1132 aa9.55□□□□□ -0.88
SH3D19-203ENST00000409598 C19orf44Q9H6X5 657 aa9.55□□□□□ -0.88
SH3D19-203ENST00000409598 DDX58O95786 925 aaKnown RBP9.55□□□□□ -0.88
SH3D19-203ENST00000409598 NBR1Q14596 966 aa9.55□□□□□ -0.88
SH3D19-203ENST00000409598 DDX54Q8TDD1 881 aaKnown RBP9.55□□□□□ -0.88
SH3D19-203ENST00000409598 PLCH2O75038 1416 aa9.55□□□□□ -0.88
SH3D19-203ENST00000409598 C11orf95C9JLR9 678 aaPredicted RBP9.54□□□□□ -0.88
SH3D19-203ENST00000409598 PRXQ9BXM0 1461 aa9.54□□□□□ -0.88
SH3D19-203ENST00000409598 EXOC5O00471 708 aa9.54□□□□□ -0.88
SH3D19-203ENST00000409598 FBXO31Q5XUX0 539 aaPredicted RBP9.54□□□□□ -0.88
SH3D19-203ENST00000409598 TMEM132EQ6IEE7 984 aa9.54□□□□□ -0.88
SH3D19-203ENST00000409598 RAB3GAP2Q9H2M9 1393 aa9.54□□□□□ -0.88
SH3D19-203ENST00000409598 FBXW7Q969H0 707 aa9.54□□□□□ -0.88
SH3D19-203ENST00000409598 SUPT16HQ9Y5B9 1047 aaKnown RBP9.54□□□□□ -0.88
SH3D19-203ENST00000409598 KRT28Q7Z3Y7 464 aa9.53□□□□□ -0.88
SH3D19-203ENST00000409598 DDRGK1Q96HY6 314 aa9.53□□□□□ -0.88
SH3D19-203ENST00000409598 ABCC10Q5T3U5 1492 aa9.53□□□□□ -0.88
SH3D19-203ENST00000409598 AMOTL1Q8IY63 956 aa9.53□□□□□ -0.88
SH3D19-203ENST00000409598 DISP3Q9P2K9 1392 aa9.53□□□□□ -0.88
SH3D19-203ENST00000409598 NUP160Q12769 1436 aa9.53□□□□□ -0.88
SH3D19-203ENST00000409598 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.52□□□□□ -0.88
SH3D19-203ENST00000409598 ATP10AO60312 1499 aa9.52□□□□□ -0.89
SH3D19-203ENST00000409598 XPCQ01831 940 aaPredicted RBP9.52□□□□□ -0.89
SH3D19-203ENST00000409598 L3MBTL2Q969R5 705 aa9.52□□□□□ -0.89
SH3D19-203ENST00000409598 KIF6Q6ZMV9 814 aa9.52□□□□□ -0.89
SH3D19-203ENST00000409598 VPS37DQ86XT2 251 aa9.52□□□□□ -0.89
SH3D19-203ENST00000409598 FGD1P98174 961 aa9.51□□□□□ -0.89
SH3D19-203ENST00000409598 ZC3H6P61129 1189 aaKnown RBP9.51□□□□□ -0.89
SH3D19-203ENST00000409598 FOXO3O43524 673 aa9.51□□□□□ -0.89
SH3D19-203ENST00000409598 CABP4P57796 275 aa9.51□□□□□ -0.89
SH3D19-203ENST00000409598 RALBP1Q15311 655 aa9.51□□□□□ -0.89
SH3D19-203ENST00000409598 CDK19Q9BWU1 502 aa9.51□□□□□ -0.89
SH3D19-203ENST00000409598 ERBINQ96RT1 1412 aa9.5□□□□□ -0.89
SH3D19-203ENST00000409598 LRRC9Q6ZRR7 1453 aa9.5□□□□□ -0.89
SH3D19-203ENST00000409598 DIAPH1O60610 1272 aaKnown RBP9.5□□□□□ -0.89
SH3D19-203ENST00000409598 ZMYM3Q14202 1370 aa9.5□□□□□ -0.89
SH3D19-203ENST00000409598 CCAR1Q8IX12 1150 aaKnown RBP9.5□□□□□ -0.89
SH3D19-203ENST00000409598 NEO1Q92859 1461 aa9.5□□□□□ -0.89
SH3D19-203ENST00000409598 ADAMTS12P58397 1594 aa9.5□□□□□ -0.89
SH3D19-203ENST00000409598 PAXIP1Q6ZW49 1069 aaPredicted RBP9.49□□□□□ -0.89
SH3D19-203ENST00000409598 STK32BQ9NY57 414 aa9.49□□□□□ -0.89
SH3D19-203ENST00000409598 A2MP01023 1474 aa9.49□□□□□ -0.89
SH3D19-203ENST00000409598 WWC1Q8IX03 1113 aa9.49□□□□□ -0.89
SH3D19-203ENST00000409598 CCDC61Q9Y6R9 512 aa9.49□□□□□ -0.89
SH3D19-203ENST00000409598 GPATCH3Q96I76 525 aa9.49□□□□□ -0.89
SH3D19-203ENST00000409598 CABP2Q9NPB3 220 aa9.49□□□□□ -0.89
SH3D19-203ENST00000409598 GAS2L2Q8NHY3 880 aa9.48□□□□□ -0.89
SH3D19-203ENST00000409598 SMC4Q9NTJ3 1288 aa9.48□□□□□ -0.89
SH3D19-203ENST00000409598 DAPK1P53355 1430 aa9.48□□□□□ -0.89
SH3D19-203ENST00000409598 IDI1Q13907 227 aa9.48□□□□□ -0.89
SH3D19-203ENST00000409598 ZPR1O75312 459 aa9.48□□□□□ -0.89
SH3D19-203ENST00000409598 CFAP70Q5T0N1 1121 aa9.48□□□□□ -0.89
SH3D19-203ENST00000409598 AK7Q96M32 723 aa9.48□□□□□ -0.89
SH3D19-203ENST00000409598 ZRANB1Q9UGI0 708 aa9.48□□□□□ -0.89
SH3D19-203ENST00000409598 CDK13Q14004 1512 aaKnown RBP9.48□□□□□ -0.89
SH3D19-203ENST00000409598 KCNA6P17658 529 aa9.47□□□□□ -0.89
SH3D19-203ENST00000409598 NGEFQ8N5V2 710 aa9.47□□□□□ -0.89
SH3D19-203ENST00000409598 ZNF652Q9Y2D9 606 aa9.47□□□□□ -0.89
SH3D19-203ENST00000409598 ATAD2Q6PL18 1390 aa9.47□□□□□ -0.89
SH3D19-203ENST00000409598 HSPA5P11021 654 aaKnown RBP9.47□□□□□ -0.89
SH3D19-203ENST00000409598 RXRBP28702 533 aa9.47□□□□□ -0.89
SH3D19-203ENST00000409598 CEP170Q5SW79 1584 aa9.47□□□□□ -0.89
SH3D19-203ENST00000409598 FRAT1Q92837 279 aaPredicted RBP9.46□□□□□ -0.89
SH3D19-203ENST00000409598 CERKQ8TCT0 537 aa9.46□□□□□ -0.89
SH3D19-203ENST00000409598 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.46□□□□□ -0.9
SH3D19-203ENST00000409598 NUDT16Q96DE0 195 aaKnown RBP9.46□□□□□ -0.9
SH3D19-203ENST00000409598 CDCA7Q9BWT1 371 aaPredicted RBP9.46□□□□□ -0.9
SH3D19-203ENST00000409598 ATP10BO94823 1461 aa9.45□□□□□ -0.9
SH3D19-203ENST00000409598 LRRFIP1Q32MZ4 808 aaKnown RBP9.45□□□□□ -0.9
SH3D19-203ENST00000409598 TMOD3Q9NYL9 352 aa9.45□□□□□ -0.9
SH3D19-203ENST00000409598 HMMRO75330 724 aa9.45□□□□□ -0.9
SH3D19-203ENST00000409598 STARD3NLO95772 234 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms