RNA–Protein interactions for RNA: ENST00000409582.7

DYSF-204, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-204ENST00000409582 BICD2Q8TD16 824 aa18.39■□□□□ 0.53
DYSF-204ENST00000409582 L3MBTL2Q969R5 705 aa18.39■□□□□ 0.53
DYSF-204ENST00000409582 TOP2AP11388 1531 aaKnown RBP18.38■□□□□ 0.53
DYSF-204ENST00000409582 APPP05067 770 aa18.38■□□□□ 0.53
DYSF-204ENST00000409582 TCEAL9Q9UHQ7 104 aa18.38■□□□□ 0.53
DYSF-204ENST00000409582 FANCD2Q9BXW9 1451 aa18.38■□□□□ 0.53
DYSF-204ENST00000409582 LMOD3Q0VAK6 560 aa18.38■□□□□ 0.53
DYSF-204ENST00000409582 SYNE3Q6ZMZ3 975 aa18.38■□□□□ 0.53
DYSF-204ENST00000409582 NLRP13Q86W25 1043 aa18.38■□□□□ 0.53
DYSF-204ENST00000409582 RRP1P56182 461 aaKnown RBP18.38■□□□□ 0.53
DYSF-204ENST00000409582 PANK3Q9H999 370 aa18.38■□□□□ 0.53
DYSF-204ENST00000409582 HDAC5Q9UQL6 1122 aa18.38■□□□□ 0.53
DYSF-204ENST00000409582 CCDC18Q5T9S5 1454 aa18.37■□□□□ 0.53
DYSF-204ENST00000409582 NAP1L1P55209 391 aaKnown RBP18.37■□□□□ 0.53
DYSF-204ENST00000409582 TRIM29Q14134 588 aa18.37■□□□□ 0.53
DYSF-204ENST00000409582 TEX35Q5T0J7 233 aa18.36■□□□□ 0.53
DYSF-204ENST00000409582 ATP6V1DQ9Y5K8 247 aa18.36■□□□□ 0.53
DYSF-204ENST00000409582 CALRP27797 417 aaKnown RBP18.36■□□□□ 0.53
DYSF-204ENST00000409582 PTPRGP23470 1445 aa18.36■□□□□ 0.53
DYSF-204ENST00000409582 SAMD1Q6SPF0 538 aaPredicted RBP18.35■□□□□ 0.53
DYSF-204ENST00000409582 DHX16O60231 1041 aaKnown RBP18.34■□□□□ 0.53
DYSF-204ENST00000409582 VPS37CA5D8V6 355 aaPredicted RBP18.34■□□□□ 0.53
DYSF-204ENST00000409582 SKIDA1Q1XH10 827 aa18.34■□□□□ 0.53
DYSF-204ENST00000409582 IFT57Q9NWB7 429 aa18.34■□□□□ 0.53
DYSF-204ENST00000409582 KIF15Q9NS87 1388 aa18.34■□□□□ 0.53
DYSF-204ENST00000409582 ZKSCAN2Q63HK3 967 aa18.33■□□□□ 0.53
DYSF-204ENST00000409582 PDE3BQ13370 1112 aa18.33■□□□□ 0.52
DYSF-204ENST00000409582 MYBBP1AQ9BQG0 1328 aaKnown RBP18.33■□□□□ 0.52
DYSF-204ENST00000409582 CHMP4AQ9BY43 222 aa18.32■□□□□ 0.52
DYSF-204ENST00000409582 RRP12Q5JTH9 1297 aaKnown RBP18.32■□□□□ 0.52
DYSF-204ENST00000409582 MINK1Q8N4C8 1332 aaPredicted RBP18.32■□□□□ 0.52
DYSF-204ENST00000409582 TTLL5Q6EMB2 1281 aa18.32■□□□□ 0.52
DYSF-204ENST00000409582 NFXL1Q6ZNB6 911 aa18.31■□□□□ 0.52
DYSF-204ENST00000409582 IPO7O95373 1038 aaKnown RBP18.31■□□□□ 0.52
DYSF-204ENST00000409582 C1orf141Q5JVX7 400 aa18.31■□□□□ 0.52
DYSF-204ENST00000409582 ATAD2BQ9ULI0 1458 aa18.31■□□□□ 0.52
DYSF-204ENST00000409582 TRIM34Q9BYJ4 488 aa18.31■□□□□ 0.52
DYSF-204ENST00000409582 C9orf78Q9NZ63 289 aaPredicted RBP18.3■□□□□ 0.52
DYSF-204ENST00000409582 R3HCC1Q9Y3T6 440 aaKnown RBP18.3■□□□□ 0.52
DYSF-204ENST00000409582 RUFY1Q96T51 708 aa18.3■□□□□ 0.52
DYSF-204ENST00000409582 SASS6Q6UVJ0 657 aa18.3■□□□□ 0.52
DYSF-204ENST00000409582 SYTL4Q96C24 671 aaPredicted RBP18.3■□□□□ 0.52
DYSF-204ENST00000409582 CPLX1O14810 134 aa18.3■□□□□ 0.52
DYSF-204ENST00000409582 CTDP1Q9Y5B0 961 aaPredicted RBP18.29■□□□□ 0.52
DYSF-204ENST00000409582 ST20-MTHFSA0A0A6YYL1 179 aa18.28■□□□□ 0.52
DYSF-204ENST00000409582 IFIT2P09913 472 aaKnown RBP18.28■□□□□ 0.52
DYSF-204ENST00000409582 FAM43AQ8N2R8 423 aa18.28■□□□□ 0.52
DYSF-204ENST00000409582 PDILTQ8N807 584 aa18.28■□□□□ 0.52
DYSF-204ENST00000409582 PHF23Q9BUL5 403 aaPredicted RBP18.28■□□□□ 0.52
DYSF-204ENST00000409582 ANKRD20A12PQ8NF67 263 aa18.27■□□□□ 0.52
DYSF-204ENST00000409582 CNKSR2Q8WXI2 1034 aa18.27■□□□□ 0.51
DYSF-204ENST00000409582 KLHL34Q8N239 644 aa18.27■□□□□ 0.51
DYSF-204ENST00000409582 FYB1O15117 783 aa18.26■□□□□ 0.51
DYSF-204ENST00000409582 MNS1Q8NEH6 495 aa18.26■□□□□ 0.51
DYSF-204ENST00000409582 RSPH4AQ5TD94 716 aa18.26■□□□□ 0.51
DYSF-204ENST00000409582 MTMR7Q9Y216 660 aa18.26■□□□□ 0.51
DYSF-204ENST00000409582 ZKSCAN1P17029 563 aaPredicted RBP18.26■□□□□ 0.51
DYSF-204ENST00000409582 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.26■□□□□ 0.51
DYSF-204ENST00000409582 NOL10Q9BSC4 688 aaKnown RBP18.26■□□□□ 0.51
DYSF-204ENST00000409582 E9PSI1 815 aa18.25■□□□□ 0.51
DYSF-204ENST00000409582 APAF1O14727 1248 aa18.25■□□□□ 0.51
DYSF-204ENST00000409582 AK7Q96M32 723 aa18.25■□□□□ 0.51
DYSF-204ENST00000409582 SMC3Q9UQE7 1217 aa18.25■□□□□ 0.51
DYSF-204ENST00000409582 RUFY2Q8WXA3 655 aa18.25■□□□□ 0.51
DYSF-204ENST00000409582 CCDC47Q96A33 483 aaKnown RBP18.25■□□□□ 0.51
DYSF-204ENST00000409582 AMOTL1Q8IY63 956 aa18.25■□□□□ 0.51
DYSF-204ENST00000409582 RNF214Q8ND24 703 aa18.24■□□□□ 0.51
DYSF-204ENST00000409582 VPS37DQ86XT2 251 aa18.24■□□□□ 0.51
DYSF-204ENST00000409582 CHMP5Q9NZZ3 219 aa18.24■□□□□ 0.51
DYSF-204ENST00000409582 REC8O95072 547 aa18.24■□□□□ 0.51
DYSF-204ENST00000409582 CCDC27Q2M243 656 aa18.24■□□□□ 0.51
DYSF-204ENST00000409582 CPLX2Q6PUV4 134 aaKnown RBP18.23■□□□□ 0.51
DYSF-204ENST00000409582 PHLDB1Q86UU1 1377 aa18.23■□□□□ 0.51
DYSF-204ENST00000409582 COG3Q96JB2 828 aa18.23■□□□□ 0.51
DYSF-204ENST00000409582 MAP7D2Q96T17 732 aa18.23■□□□□ 0.51
DYSF-204ENST00000409582 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.23■□□□□ 0.51
DYSF-204ENST00000409582 DHX37Q8IY37 1157 aaKnown RBP18.23■□□□□ 0.51
DYSF-204ENST00000409582 CCDC144AA2RUR9 1427 aa18.23■□□□□ 0.51
DYSF-204ENST00000409582 PSME1Q06323 249 aa18.23■□□□□ 0.51
DYSF-204ENST00000409582 HOOK1Q9UJC3 728 aaKnown RBP18.22■□□□□ 0.51
DYSF-204ENST00000409582 LNPKQ9C0E8 428 aa18.22■□□□□ 0.51
DYSF-204ENST00000409582 TEFQ10587 303 aa18.22■□□□□ 0.51
DYSF-204ENST00000409582 CT47A1Q5JQC4 288 aaPredicted RBP18.21■□□□□ 0.51
DYSF-204ENST00000409582 SMARCA4P51532 1647 aa18.21■□□□□ 0.51
DYSF-204ENST00000409582 RAD54L2Q9Y4B4 1467 aa18.21■□□□□ 0.51
DYSF-204ENST00000409582 ZFYVE27Q5T4F4 411 aa18.21■□□□□ 0.51
DYSF-204ENST00000409582 KRI1Q8N9T8 703 aaKnown RBP18.21■□□□□ 0.51
DYSF-204ENST00000409582 NEXNQ0ZGT2 675 aa18.21■□□□□ 0.5
DYSF-204ENST00000409582 TRDNQ13061 729 aa18.21■□□□□ 0.5
DYSF-204ENST00000409582 TTC5Q8N0Z6 440 aa18.21■□□□□ 0.5
DYSF-204ENST00000409582 CAGE1Q8TC20 777 aa18.21■□□□□ 0.5
DYSF-204ENST00000409582 PRDM2Q13029 1718 aa18.2■□□□□ 0.5
DYSF-204ENST00000409582 RBM10P98175 930 aaKnown RBP18.2■□□□□ 0.5
DYSF-204ENST00000409582 ERICH2A1L162 156 aa18.19■□□□□ 0.5
DYSF-204ENST00000409582 VGFO15240 615 aaPredicted RBP18.19■□□□□ 0.5
DYSF-204ENST00000409582 CGNL1Q0VF96 1302 aa18.19■□□□□ 0.5
DYSF-204ENST00000409582 RUSC2Q8N2Y8 1516 aa18.19■□□□□ 0.5
DYSF-204ENST00000409582 HSP90AB2PQ58FF8 381 aa18.19■□□□□ 0.5
DYSF-204ENST00000409582 RIPK4P57078 832 aa18.19■□□□□ 0.5
DYSF-204ENST00000409582 NUTM2GQ5VZR2 741 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms