RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 NBPF1Q3BBV0 1214 aa22.16■■□□□ 1.14
SHANK2-204ENST00000409530 CARD11Q9BXL7 1154 aa22.16■■□□□ 1.14
SHANK2-204ENST00000409530 HSPA5P11021 654 aaKnown RBP22.14■■□□□ 1.13
SHANK2-204ENST00000409530 MYOM2P54296 1465 aa22.14■■□□□ 1.13
SHANK2-204ENST00000409530 MYO3AQ8NEV4 1616 aa22.13■■□□□ 1.13
SHANK2-204ENST00000409530 A2ML1A8K2U0 1454 aa22.13■■□□□ 1.13
SHANK2-204ENST00000409530 UBR1Q8IWV7 1749 aa22.12■■□□□ 1.13
SHANK2-204ENST00000409530 EIF4G2P78344 907 aaKnown RBP eCLIP22.12■■□□□ 1.13
SHANK2-204ENST00000409530 USP47Q96K76 1375 aa22.1■■□□□ 1.13
SHANK2-204ENST00000409530 CFAP70Q5T0N1 1121 aa22.09■■□□□ 1.13
SHANK2-204ENST00000409530 RPGRIP1LQ68CZ1 1315 aa22.07■■□□□ 1.12
SHANK2-204ENST00000409530 RIMS2Q9UQ26 1411 aa22.06■■□□□ 1.12
SHANK2-204ENST00000409530 NLRP1Q9C000 1473 aa22.06■■□□□ 1.12
SHANK2-204ENST00000409530 PTPRMP28827 1452 aa22.06■■□□□ 1.12
SHANK2-204ENST00000409530 PIK3C2GO75747 1445 aa22.05■■□□□ 1.12
SHANK2-204ENST00000409530 VGFO15240 615 aaPredicted RBP22.04■■□□□ 1.12
SHANK2-204ENST00000409530 NRXN1Q9ULB1 1477 aa22.04■■□□□ 1.12
SHANK2-204ENST00000409530 CEP170BQ9Y4F5 1589 aaPredicted RBP22.02■■□□□ 1.12
SHANK2-204ENST00000409530 BCANQ96GW7 911 aa22.01■■□□□ 1.11
SHANK2-204ENST00000409530 KIAA1210Q9ULL0 1709 aa22.01■■□□□ 1.11
SHANK2-204ENST00000409530 TMEM132EQ6IEE7 984 aa22.01■■□□□ 1.11
SHANK2-204ENST00000409530 STAC3Q96MF2 364 aa22.01■■□□□ 1.11
SHANK2-204ENST00000409530 POLR3GLQ9BT43 218 aa22■■□□□ 1.11
SHANK2-204ENST00000409530 KDM5AP29375 1690 aaKnown RBP21.99■■□□□ 1.11
SHANK2-204ENST00000409530 ST20-MTHFSA0A0A6YYL1 179 aa21.99■■□□□ 1.11
SHANK2-204ENST00000409530 ZFYVE9O95405 1425 aa21.99■■□□□ 1.11
SHANK2-204ENST00000409530 GPRASP1Q5JY77 1395 aa21.99■■□□□ 1.11
SHANK2-204ENST00000409530 LAMC1P11047 1609 aa21.98■■□□□ 1.11
SHANK2-204ENST00000409530 IQGAP1P46940 1657 aa21.98■■□□□ 1.11
SHANK2-204ENST00000409530 TMEM2Q9UHN6 1383 aa21.98■■□□□ 1.11
SHANK2-204ENST00000409530 DIEXFQ68CQ4 756 aaKnown RBP21.97■■□□□ 1.11
SHANK2-204ENST00000409530 ZNF142P52746 1687 aaPredicted RBP21.94■■□□□ 1.1
SHANK2-204ENST00000409530 C14orf93Q9H972 538 aaKnown RBP21.94■■□□□ 1.1
SHANK2-204ENST00000409530 STK26Q9P289 416 aa21.93■■□□□ 1.1
SHANK2-204ENST00000409530 TRAK1Q9UPV9 953 aa21.93■■□□□ 1.1
SHANK2-204ENST00000409530 SCAF11Q99590 1463 aaKnown RBP21.93■■□□□ 1.1
SHANK2-204ENST00000409530 KDM4FA0A1W2PPD8 638 aa21.92■■□□□ 1.1
SHANK2-204ENST00000409530 C11orf95C9JLR9 678 aaPredicted RBP21.92■■□□□ 1.1
SHANK2-204ENST00000409530 LTKP29376 864 aa21.92■■□□□ 1.1
SHANK2-204ENST00000409530 DDX10Q13206 875 aaKnown RBP21.92■■□□□ 1.1
SHANK2-204ENST00000409530 ALKQ9UM73 1620 aa21.92■■□□□ 1.1
SHANK2-204ENST00000409530 ASXL1Q8IXJ9 1541 aa21.92■■□□□ 1.1
SHANK2-204ENST00000409530 ADGRB1O14514 1584 aa21.92■■□□□ 1.1
SHANK2-204ENST00000409530 TXNDC2Q86VQ3 553 aa21.92■■□□□ 1.1
SHANK2-204ENST00000409530 NRXN3Q9Y4C0 1643 aa21.91■■□□□ 1.1
SHANK2-204ENST00000409530 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.91■■□□□ 1.1
SHANK2-204ENST00000409530 THEMISQ8N1K5 641 aaPredicted RBP21.91■■□□□ 1.1
SHANK2-204ENST00000409530 SETBP1Q9Y6X0 1596 aa21.91■■□□□ 1.1
SHANK2-204ENST00000409530 WASHC2AQ641Q2 1341 aa21.91■■□□□ 1.1
SHANK2-204ENST00000409530 EID1Q9Y6B2 187 aa21.89■■□□□ 1.1
SHANK2-204ENST00000409530 SETD1BQ9UPS6 1966 aaKnown RBP21.89■■□□□ 1.09
SHANK2-204ENST00000409530 POLR1AO95602 1720 aaPredicted RBP21.88■■□□□ 1.09
SHANK2-204ENST00000409530 SLIT1O75093 1534 aa21.88■■□□□ 1.09
SHANK2-204ENST00000409530 HDGFP51858 240 aaKnown RBP21.88■■□□□ 1.09
SHANK2-204ENST00000409530 EIF3AQ14152 1382 aaKnown RBP21.87■■□□□ 1.09
SHANK2-204ENST00000409530 SETD1AO15047 1707 aaKnown RBP21.87■■□□□ 1.09
SHANK2-204ENST00000409530 SAFB2Q14151 953 aaKnown RBP eCLIP21.86■■□□□ 1.09
SHANK2-204ENST00000409530 KIF7Q2M1P5 1343 aa21.86■■□□□ 1.09
SHANK2-204ENST00000409530 ARHGAP23Q9P227 1491 aa21.86■■□□□ 1.09
SHANK2-204ENST00000409530 SLC26A8Q96RN1 970 aa21.85■■□□□ 1.09
SHANK2-204ENST00000409530 ARHGEF28Q8N1W1 1705 aaKnown RBP21.85■■□□□ 1.09
SHANK2-204ENST00000409530 CCDC7Q96M83 1385 aa21.84■■□□□ 1.09
SHANK2-204ENST00000409530 QRICH2Q9H0J4 1663 aa21.83■■□□□ 1.09
SHANK2-204ENST00000409530 DISP3Q9P2K9 1392 aa21.83■■□□□ 1.08
SHANK2-204ENST00000409530 METP08581 1390 aa21.82■■□□□ 1.08
SHANK2-204ENST00000409530 PLEKHG1Q9ULL1 1385 aa21.82■■□□□ 1.08
SHANK2-204ENST00000409530 YTHDC2Q9H6S0 1430 aaKnown RBP21.81■■□□□ 1.08
SHANK2-204ENST00000409530 TESK2Q96S53 571 aa21.8■■□□□ 1.08
SHANK2-204ENST00000409530 CENPJQ9HC77 1338 aaPredicted RBP21.79■■□□□ 1.08
SHANK2-204ENST00000409530 ADAMTS13Q76LX8 1427 aa21.79■■□□□ 1.08
SHANK2-204ENST00000409530 HSPA2P54652 639 aa21.78■■□□□ 1.08
SHANK2-204ENST00000409530 ANKLE2Q86XL3 938 aa21.76■■□□□ 1.07
SHANK2-204ENST00000409530 TMF1P82094 1093 aa21.76■■□□□ 1.07
SHANK2-204ENST00000409530 CNGB1Q14028 1251 aaPredicted RBP21.75■■□□□ 1.07
SHANK2-204ENST00000409530 PRAM1Q96QH2 718 aa21.75■■□□□ 1.07
SHANK2-204ENST00000409530 POGKQ9P215 609 aa21.74■■□□□ 1.07
SHANK2-204ENST00000409530 NCKAP5LQ9HCH0 1330 aa21.74■■□□□ 1.07
SHANK2-204ENST00000409530 MINK1Q8N4C8 1332 aaPredicted RBP21.72■■□□□ 1.07
SHANK2-204ENST00000409530 WAPLQ7Z5K2 1190 aa21.71■■□□□ 1.07
SHANK2-204ENST00000409530 PLEKHH1Q9ULM0 1364 aa21.71■■□□□ 1.07
SHANK2-204ENST00000409530 LRPPRCP42704 1394 aaKnown RBP21.7■■□□□ 1.06
SHANK2-204ENST00000409530 MIER1Q8N108 512 aa21.7■■□□□ 1.06
SHANK2-204ENST00000409530 PTPRUQ92729 1446 aa21.68■■□□□ 1.06
SHANK2-204ENST00000409530 LMTK3Q96Q04 1460 aa21.67■■□□□ 1.06
SHANK2-204ENST00000409530 KNDC1Q76NI1 1749 aa21.67■■□□□ 1.06
SHANK2-204ENST00000409530 NPHP4O75161 1426 aaPredicted RBP21.67■■□□□ 1.06
SHANK2-204ENST00000409530 MED14O60244 1454 aa21.67■■□□□ 1.06
SHANK2-204ENST00000409530 DIP2AQ14689 1571 aa21.67■■□□□ 1.06
SHANK2-204ENST00000409530 TULP4Q9NRJ4 1543 aa21.66■■□□□ 1.06
SHANK2-204ENST00000409530 ROBO2Q9HCK4 1378 aa21.64■■□□□ 1.06
SHANK2-204ENST00000409530 CPS1P31327 1500 aa21.64■■□□□ 1.05
SHANK2-204ENST00000409530 ABCC11Q96J66 1382 aa21.64■■□□□ 1.05
SHANK2-204ENST00000409530 AMOTL2Q9Y2J4 779 aa21.64■■□□□ 1.05
SHANK2-204ENST00000409530 DLC1Q96QB1 1528 aa21.64■■□□□ 1.05
SHANK2-204ENST00000409530 MYOM1P52179 1685 aa21.63■■□□□ 1.05
SHANK2-204ENST00000409530 TBX22Q9Y458 520 aa21.63■■□□□ 1.05
SHANK2-204ENST00000409530 SBNO2Q9Y2G9 1366 aa21.62■■□□□ 1.05
SHANK2-204ENST00000409530 CABP2Q9NPB3 220 aa21.62■■□□□ 1.05
SHANK2-204ENST00000409530 SRPK2P78362 688 aaKnown RBP21.61■■□□□ 1.05
SHANK2-204ENST00000409530 CDCA8Q53HL2 280 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms