RNA–Protein interactions for RNA: ENST00000405957.6

LSP1-203, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LSP1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-203ENST00000405957 CFAP65Q6ZU64 1925 aaKnown RBP23.73■■□□□ 1.39
LSP1-203ENST00000405957 SYNMO15061 1565 aa23.72■■□□□ 1.39
LSP1-203ENST00000405957 PPLO60437 1756 aa23.72■■□□□ 1.39
LSP1-203ENST00000405957 ESF1Q9H501 851 aaKnown RBP23.72■■□□□ 1.39
LSP1-203ENST00000405957 FER1L4A9Z1Z3 1794 aa23.7■■□□□ 1.39
LSP1-203ENST00000405957 NRXN1Q9ULB1 1477 aa23.7■■□□□ 1.38
LSP1-203ENST00000405957 PREX1Q8TCU6 1659 aa23.69■■□□□ 1.38
LSP1-203ENST00000405957 PRKRIP1Q9H875 184 aaPredicted RBP23.68■■□□□ 1.38
LSP1-203ENST00000405957 SCAF11Q99590 1463 aaKnown RBP23.65■■□□□ 1.38
LSP1-203ENST00000405957 ADAMTSL3P82987 1691 aa23.65■■□□□ 1.38
LSP1-203ENST00000405957 ZMYM3Q14202 1370 aa23.65■■□□□ 1.38
LSP1-203ENST00000405957 FBXO31Q5XUX0 539 aaPredicted RBP23.61■■□□□ 1.37
LSP1-203ENST00000405957 SETBP1Q9Y6X0 1596 aa23.61■■□□□ 1.37
LSP1-203ENST00000405957 RIMS1Q86UR5 1692 aaKnown RBP23.6■■□□□ 1.37
LSP1-203ENST00000405957 TESK2Q96S53 571 aa23.6■■□□□ 1.37
LSP1-203ENST00000405957 PELP1Q8IZL8 1130 aaKnown RBP23.6■■□□□ 1.37
LSP1-203ENST00000405957 ERVK-7P63135 1459 aa23.59■■□□□ 1.37
LSP1-203ENST00000405957 POLR3GLQ9BT43 218 aa23.59■■□□□ 1.37
LSP1-203ENST00000405957 RPGRIP1LQ68CZ1 1315 aa23.58■■□□□ 1.37
LSP1-203ENST00000405957 C3P01024 1663 aa23.58■■□□□ 1.37
LSP1-203ENST00000405957 EIF3AQ14152 1382 aaKnown RBP23.57■■□□□ 1.36
LSP1-203ENST00000405957 SPATA31D1Q6ZQQ2 1576 aa23.57■■□□□ 1.36
LSP1-203ENST00000405957 NEXMIFQ5QGS0 1516 aa23.57■■□□□ 1.36
LSP1-203ENST00000405957 ADGRF5Q8IZF2 1346 aa23.56■■□□□ 1.36
LSP1-203ENST00000405957 PIK3C2GO75747 1445 aa23.56■■□□□ 1.36
LSP1-203ENST00000405957 KTN1Q86UP2 1357 aaKnown RBP23.56■■□□□ 1.36
LSP1-203ENST00000405957 MYO3AQ8NEV4 1616 aa23.56■■□□□ 1.36
LSP1-203ENST00000405957 CEBPAP49715 358 aaPredicted RBP23.55■■□□□ 1.36
LSP1-203ENST00000405957 DISP3Q9P2K9 1392 aa23.55■■□□□ 1.36
LSP1-203ENST00000405957 MYO5BQ9ULV0 1848 aa23.54■■□□□ 1.36
LSP1-203ENST00000405957 TMEM131LA2VDJ0 1609 aa23.54■■□□□ 1.36
LSP1-203ENST00000405957 CHGAP10645 457 aaKnown RBP23.52■■□□□ 1.36
LSP1-203ENST00000405957 TMF1P82094 1093 aa23.52■■□□□ 1.36
LSP1-203ENST00000405957 PLPPR3Q6T4P5 718 aa23.52■■□□□ 1.36
LSP1-203ENST00000405957 SLC52A1Q9NWF4 448 aa23.52■■□□□ 1.36
LSP1-203ENST00000405957 SUPT16HQ9Y5B9 1047 aaKnown RBP23.52■■□□□ 1.36
LSP1-203ENST00000405957 MRS2Q9HD23 443 aa23.5■■□□□ 1.35
LSP1-203ENST00000405957 HNRNPUQ00839 825 aaKnown RBP eCLIP23.49■■□□□ 1.355e-9■□□□□ 9.8
LSP1-203ENST00000405957 CFAP70Q5T0N1 1121 aa23.49■■□□□ 1.35
LSP1-203ENST00000405957 ADGRB1O14514 1584 aa23.48■■□□□ 1.35
LSP1-203ENST00000405957 IDI1Q13907 227 aa23.47■■□□□ 1.35
LSP1-203ENST00000405957 ZFYVE9O95405 1425 aa23.47■■□□□ 1.35
LSP1-203ENST00000405957 KDM5AP29375 1690 aaKnown RBP23.47■■□□□ 1.35
LSP1-203ENST00000405957 TNRQ92752 1358 aa23.47■■□□□ 1.35
LSP1-203ENST00000405957 NEFLP07196 543 aa23.45■■□□□ 1.34
LSP1-203ENST00000405957 PTPRMP28827 1452 aa23.45■■□□□ 1.34
LSP1-203ENST00000405957 MYOM1P52179 1685 aa23.45■■□□□ 1.34
LSP1-203ENST00000405957 C14orf93Q9H972 538 aaKnown RBP23.43■■□□□ 1.34
LSP1-203ENST00000405957 SBNO2Q9Y2G9 1366 aa23.43■■□□□ 1.34
LSP1-203ENST00000405957 SLC24A1O60721 1099 aa23.42■■□□□ 1.34
LSP1-203ENST00000405957 CDCA8Q53HL2 280 aa23.42■■□□□ 1.34
LSP1-203ENST00000405957 VGFO15240 615 aaPredicted RBP23.41■■□□□ 1.34
LSP1-203ENST00000405957 RALBP1Q15311 655 aa23.41■■□□□ 1.34
LSP1-203ENST00000405957 QRICH2Q9H0J4 1663 aa23.41■■□□□ 1.34
LSP1-203ENST00000405957 KDM4FA0A1W2PPD8 638 aa23.4■■□□□ 1.34
LSP1-203ENST00000405957 CCDC184Q52MB2 194 aa23.4■■□□□ 1.34
LSP1-203ENST00000405957 ZBED9Q6R2W3 1325 aa23.38■■□□□ 1.33
LSP1-203ENST00000405957 ARHGEF28Q8N1W1 1705 aaKnown RBP23.38■■□□□ 1.33
LSP1-203ENST00000405957 NLRP1Q9C000 1473 aa23.36■■□□□ 1.33
LSP1-203ENST00000405957 PARD3Q8TEW0 1356 aa23.35■■□□□ 1.33
LSP1-203ENST00000405957 PER1O15534 1290 aaPredicted RBP23.35■■□□□ 1.33
LSP1-203ENST00000405957 FAM9BQ8IZU0 186 aa23.35■■□□□ 1.33
LSP1-203ENST00000405957 STAG3Q9UJ98 1225 aa23.35■■□□□ 1.33
LSP1-203ENST00000405957 BRD4O60885 1362 aaPredicted RBP23.35■■□□□ 1.33
LSP1-203ENST00000405957 MYBBP1AQ9BQG0 1328 aaKnown RBP23.34■■□□□ 1.33
LSP1-203ENST00000405957 A2ML1A8K2U0 1454 aa23.33■■□□□ 1.32
LSP1-203ENST00000405957 ASXL1Q8IXJ9 1541 aa23.33■■□□□ 1.32
LSP1-203ENST00000405957 UBR1Q8IWV7 1749 aa23.32■■□□□ 1.32
LSP1-203ENST00000405957 CENPJQ9HC77 1338 aaPredicted RBP23.31■■□□□ 1.32
LSP1-203ENST00000405957 PANK3Q9H999 370 aa23.31■■□□□ 1.32
LSP1-203ENST00000405957 SETD1BQ9UPS6 1966 aaKnown RBP23.31■■□□□ 1.32
LSP1-203ENST00000405957 FKBP8Q14318 412 aa23.29■■□□□ 1.32
LSP1-203ENST00000405957 CEP170BQ9Y4F5 1589 aaPredicted RBP23.28■■□□□ 1.32
LSP1-203ENST00000405957 TMC1Q8TDI8 760 aa23.27■■□□□ 1.32
LSP1-203ENST00000405957 ZNF142P52746 1687 aaPredicted RBP23.26■■□□□ 1.31
LSP1-203ENST00000405957 CNGB1Q14028 1251 aaPredicted RBP23.26■■□□□ 1.31
LSP1-203ENST00000405957 NUTM2DQ5VT03 806 aaPredicted RBP23.26■■□□□ 1.31
LSP1-203ENST00000405957 ALKQ9UM73 1620 aa23.25■■□□□ 1.31
LSP1-203ENST00000405957 TRAK1Q9UPV9 953 aa23.25■■□□□ 1.31
LSP1-203ENST00000405957 TMEM132EQ6IEE7 984 aa23.24■■□□□ 1.31
LSP1-203ENST00000405957 SETD1AO15047 1707 aaKnown RBP23.24■■□□□ 1.31
LSP1-203ENST00000405957 NLRP13Q86W25 1043 aa23.24■■□□□ 1.31
LSP1-203ENST00000405957 PNISRQ8TF01 805 aaKnown RBP23.23■■□□□ 1.31
LSP1-203ENST00000405957 ERICH6BQ5W0A0 696 aa23.22■■□□□ 1.31
LSP1-203ENST00000405957 RIMS2Q9UQ26 1411 aa23.22■■□□□ 1.31
LSP1-203ENST00000405957 LRPPRCP42704 1394 aaKnown RBP23.22■■□□□ 1.31
LSP1-203ENST00000405957 NPC1L1Q9UHC9 1359 aa23.21■■□□□ 1.31
LSP1-203ENST00000405957 TMEM2Q9UHN6 1383 aa23.21■■□□□ 1.31
LSP1-203ENST00000405957 TULP4Q9NRJ4 1543 aa23.19■■□□□ 1.3
LSP1-203ENST00000405957 INSRP06213 1382 aa23.19■■□□□ 1.3
LSP1-203ENST00000405957 THEMISQ8N1K5 641 aaPredicted RBP23.19■■□□□ 1.3
LSP1-203ENST00000405957 KNSTRNQ9Y448 316 aa23.19■■□□□ 1.3
LSP1-203ENST00000405957 YTHDC2Q9H6S0 1430 aaKnown RBP23.18■■□□□ 1.3
LSP1-203ENST00000405957 NRXN3Q9Y4C0 1643 aa23.18■■□□□ 1.3
LSP1-203ENST00000405957 SLIT1O75093 1534 aa23.17■■□□□ 1.3
LSP1-203ENST00000405957 CC2D1BQ5T0F9 858 aaKnown RBP23.17■■□□□ 1.3
LSP1-203ENST00000405957 SMG6Q86US8 1419 aaKnown RBP23.16■■□□□ 1.3
LSP1-203ENST00000405957 ARHGAP23Q9P227 1491 aa23.15■■□□□ 1.3
LSP1-203ENST00000405957 AMER1Q5JTC6 1135 aaPredicted RBP23.15■■□□□ 1.3
LSP1-203ENST00000405957 PUS7Q96PZ0 661 aaKnown RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms