RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 MAP3K4Q9Y6R4 1608 aa21.83■■□□□ 1.09
CDKN1A-203ENST00000405375 KIF1BO60333 1816 aa21.82■■□□□ 1.08
CDKN1A-203ENST00000405375 MLH3Q9UHC1 1453 aa21.81■■□□□ 1.08
CDKN1A-203ENST00000405375 SYNMO15061 1565 aa21.81■■□□□ 1.08
CDKN1A-203ENST00000405375 B4GALNT3Q6L9W6 998 aa21.81■■□□□ 1.08
CDKN1A-203ENST00000405375 IFT172Q9UG01 1749 aa21.81■■□□□ 1.08
CDKN1A-203ENST00000405375 CDCA8Q53HL2 280 aa21.8■■□□□ 1.08
CDKN1A-203ENST00000405375 EIF3AQ14152 1382 aaKnown RBP21.8■■□□□ 1.08
CDKN1A-203ENST00000405375 FRMPD1Q5SYB0 1578 aa21.8■■□□□ 1.08
CDKN1A-203ENST00000405375 ABCA6Q8N139 1617 aa21.79■■□□□ 1.08
CDKN1A-203ENST00000405375 BLMP54132 1417 aaPredicted RBP21.78■■□□□ 1.08
CDKN1A-203ENST00000405375 MROH2AA6NES4 1674 aa21.78■■□□□ 1.08
CDKN1A-203ENST00000405375 NRXN1Q9ULB1 1477 aa21.78■■□□□ 1.08
CDKN1A-203ENST00000405375 ADGRF5Q8IZF2 1346 aa21.77■■□□□ 1.08
CDKN1A-203ENST00000405375 HECW2Q9P2P5 1572 aa21.77■■□□□ 1.08
CDKN1A-203ENST00000405375 MYOM1P52179 1685 aa21.77■■□□□ 1.07
CDKN1A-203ENST00000405375 PDE3BQ13370 1112 aa21.76■■□□□ 1.07
CDKN1A-203ENST00000405375 AMER1Q5JTC6 1135 aaPredicted RBP21.76■■□□□ 1.07
CDKN1A-203ENST00000405375 ADGRB3O60242 1522 aa21.75■■□□□ 1.07
CDKN1A-203ENST00000405375 CFAP70Q5T0N1 1121 aa21.75■■□□□ 1.07
CDKN1A-203ENST00000405375 KNSTRNQ9Y448 316 aa21.75■■□□□ 1.07
CDKN1A-203ENST00000405375 NPATQ14207 1427 aa21.74■■□□□ 1.07
CDKN1A-203ENST00000405375 KDM5AP29375 1690 aaKnown RBP21.71■■□□□ 1.07
CDKN1A-203ENST00000405375 ASXL1Q8IXJ9 1541 aa21.71■■□□□ 1.07
CDKN1A-203ENST00000405375 NPC1L1Q9UHC9 1359 aa21.71■■□□□ 1.07
CDKN1A-203ENST00000405375 CYB5RLQ6IPT4 315 aa21.71■■□□□ 1.07
CDKN1A-203ENST00000405375 ERVK-7P63135 1459 aa21.7■■□□□ 1.06
CDKN1A-203ENST00000405375 NEO1Q92859 1461 aa21.7■■□□□ 1.06
CDKN1A-203ENST00000405375 SLC24A1O60721 1099 aa21.69■■□□□ 1.06
CDKN1A-203ENST00000405375 PPP2R1AP30153 589 aa21.69■■□□□ 1.06
CDKN1A-203ENST00000405375 SALL2Q9Y467 1007 aaPredicted RBP21.69■■□□□ 1.06
CDKN1A-203ENST00000405375 MYO3AQ8NEV4 1616 aa21.68■■□□□ 1.06
CDKN1A-203ENST00000405375 NOS1P29475 1434 aa21.68■■□□□ 1.06
CDKN1A-203ENST00000405375 ABCC3O15438 1527 aa21.68■■□□□ 1.06
CDKN1A-203ENST00000405375 SETBP1Q9Y6X0 1596 aa21.67■■□□□ 1.06
CDKN1A-203ENST00000405375 SBNO2Q9Y2G9 1366 aa21.67■■□□□ 1.06
CDKN1A-203ENST00000405375 RRP1P56182 461 aaKnown RBP21.66■■□□□ 1.06
CDKN1A-203ENST00000405375 GGT6Q6P531 493 aa21.66■■□□□ 1.06
CDKN1A-203ENST00000405375 RCAN3Q9UKA8 241 aa21.66■■□□□ 1.06
CDKN1A-203ENST00000405375 PIK3C2GO75747 1445 aa21.65■■□□□ 1.06
CDKN1A-203ENST00000405375 PPLO60437 1756 aa21.65■■□□□ 1.06
CDKN1A-203ENST00000405375 CDCA7LQ96GN5 454 aa21.64■■□□□ 1.06
CDKN1A-203ENST00000405375 ADAMTS8Q9UP79 889 aa21.64■■□□□ 1.05
CDKN1A-203ENST00000405375 CFAP65Q6ZU64 1925 aaKnown RBP21.63■■□□□ 1.05
CDKN1A-203ENST00000405375 CCDC136Q96JN2 1154 aa21.63■■□□□ 1.05
CDKN1A-203ENST00000405375 FANCIQ9NVI1 1328 aa21.63■■□□□ 1.05
CDKN1A-203ENST00000405375 RAPGEF3O95398 923 aa21.62■■□□□ 1.05
CDKN1A-203ENST00000405375 CAMSAP1Q5T5Y3 1602 aa21.61■■□□□ 1.05
CDKN1A-203ENST00000405375 DIP2CQ9Y2E4 1556 aa21.61■■□□□ 1.05
CDKN1A-203ENST00000405375 ANP32EQ9BTT0 268 aa21.6■■□□□ 1.05
CDKN1A-203ENST00000405375 ADGRB1O14514 1584 aa21.6■■□□□ 1.05
CDKN1A-203ENST00000405375 C14orf93Q9H972 538 aaKnown RBP21.6■■□□□ 1.05
CDKN1A-203ENST00000405375 CHGAP10645 457 aaKnown RBP21.59■■□□□ 1.05
CDKN1A-203ENST00000405375 SIGLEC1Q9BZZ2 1709 aa21.59■■□□□ 1.05
CDKN1A-203ENST00000405375 RPGRIP1LQ68CZ1 1315 aa21.59■■□□□ 1.05
CDKN1A-203ENST00000405375 RICTORQ6R327 1708 aa21.58■■□□□ 1.04
CDKN1A-203ENST00000405375 PIK3C2BO00750 1634 aa21.58■■□□□ 1.04
CDKN1A-203ENST00000405375 CENPJQ9HC77 1338 aaPredicted RBP21.57■■□□□ 1.04
CDKN1A-203ENST00000405375 CARD14Q9BXL6 1004 aa21.57■■□□□ 1.04
CDKN1A-203ENST00000405375 WDR43Q15061 677 aaKnown RBP eCLIP21.56■■□□□ 1.04
CDKN1A-203ENST00000405375 ZC3H13Q5T200 1668 aaKnown RBP21.55■■□□□ 1.04
CDKN1A-203ENST00000405375 ARHGAP31Q2M1Z3 1444 aa21.54■■□□□ 1.04
CDKN1A-203ENST00000405375 MSH5O43196 834 aa21.54■■□□□ 1.04
CDKN1A-203ENST00000405375 PLEKHH1Q9ULM0 1364 aa21.54■■□□□ 1.04
CDKN1A-203ENST00000405375 EXOC6Q8TAG9 804 aa21.53■■□□□ 1.04
CDKN1A-203ENST00000405375 ZNF521Q96K83 1311 aa21.53■■□□□ 1.04
CDKN1A-203ENST00000405375 QRICH2Q9H0J4 1663 aa21.52■■□□□ 1.04
CDKN1A-203ENST00000405375 TRAK1Q9UPV9 953 aa21.52■■□□□ 1.03
CDKN1A-203ENST00000405375 NEXMIFQ5QGS0 1516 aa21.5■■□□□ 1.03
CDKN1A-203ENST00000405375 YEATS2Q9ULM3 1422 aa21.49■■□□□ 1.03
CDKN1A-203ENST00000405375 GLI2P10070 1586 aa21.48■■□□□ 1.03
CDKN1A-203ENST00000405375 TMEM132EQ6IEE7 984 aa21.48■■□□□ 1.03
CDKN1A-203ENST00000405375 DUSP27Q5VZP5 1158 aa21.46■■□□□ 1.03
CDKN1A-203ENST00000405375 RIMBP3CA6NJZ7 1639 aa21.45■■□□□ 1.03
CDKN1A-203ENST00000405375 RIMBP3BA6NNM3 1639 aa21.45■■□□□ 1.03
CDKN1A-203ENST00000405375 RIMBP3Q9UFD9 1639 aa21.45■■□□□ 1.03
CDKN1A-203ENST00000405375 VGFO15240 615 aaPredicted RBP21.45■■□□□ 1.02
CDKN1A-203ENST00000405375 FAM69CQ0P6D2 419 aa21.44■■□□□ 1.02
CDKN1A-203ENST00000405375 NSD3Q9BZ95 1437 aa21.43■■□□□ 1.02
CDKN1A-203ENST00000405375 PLIN1O60240 522 aa21.43■■□□□ 1.02
CDKN1A-203ENST00000405375 GOLGA2Q08379 1002 aa21.43■■□□□ 1.02
CDKN1A-203ENST00000405375 IDI1Q13907 227 aa21.43■■□□□ 1.02
CDKN1A-203ENST00000405375 ARHGEF28Q8N1W1 1705 aaKnown RBP21.43■■□□□ 1.02
CDKN1A-203ENST00000405375 ZFYVE9O95405 1425 aa21.43■■□□□ 1.02
CDKN1A-203ENST00000405375 POLR3AO14802 1390 aaPredicted RBP21.42■■□□□ 1.02
CDKN1A-203ENST00000405375 SLC12A5Q9H2X9 1139 aa21.42■■□□□ 1.02
CDKN1A-203ENST00000405375 SLC52A1Q9NWF4 448 aa21.41■■□□□ 1.02
CDKN1A-203ENST00000405375 PUS7Q96PZ0 661 aaKnown RBP21.41■■□□□ 1.02
CDKN1A-203ENST00000405375 USP32Q8NFA0 1604 aa21.41■■□□□ 1.02
CDKN1A-203ENST00000405375 NUTM2DQ5VT03 806 aaPredicted RBP21.4■■□□□ 1.02
CDKN1A-203ENST00000405375 CCDC146Q8IYE0 955 aa21.4■■□□□ 1.02
CDKN1A-203ENST00000405375 TRMT2AQ8IZ69 625 aaKnown RBP21.4■■□□□ 1.02
CDKN1A-203ENST00000405375 SLFN5Q08AF3 891 aa21.39■■□□□ 1.02
CDKN1A-203ENST00000405375 TULP4Q9NRJ4 1543 aa21.39■■□□□ 1.01
CDKN1A-203ENST00000405375 PREX1Q8TCU6 1659 aa21.39■■□□□ 1.01
CDKN1A-203ENST00000405375 APAF1O14727 1248 aa21.38■■□□□ 1.01
CDKN1A-203ENST00000405375 TMEM131LA2VDJ0 1609 aa21.37■■□□□ 1.01
CDKN1A-203ENST00000405375 CRBNQ96SW2 442 aa21.36■■□□□ 1.01
CDKN1A-203ENST00000405375 MYO5BQ9ULV0 1848 aa21.36■■□□□ 1.01
CDKN1A-203ENST00000405375 EVC2Q86UK5 1308 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms