RNA–Protein interactions for RNA: ENST00000404816.6

LTBP1-203, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene LTBP1, Length 6,333 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-203ENST00000404816 ST20-MTHFSA0A0A6YYL1 179 aa22.2■■□□□ 1.14
LTBP1-203ENST00000404816 TSR1Q2NL82 804 aaKnown RBP22.2■■□□□ 1.14
LTBP1-203ENST00000404816 ZKSCAN2Q63HK3 967 aa22.2■■□□□ 1.14
LTBP1-203ENST00000404816 MRE11P49959 708 aa22.19■■□□□ 1.14
LTBP1-203ENST00000404816 ANO2Q9NQ90 1003 aa22.19■■□□□ 1.14
LTBP1-203ENST00000404816 TRAK2O60296 914 aa22.18■■□□□ 1.14
LTBP1-203ENST00000404816 VPS37CA5D8V6 355 aaPredicted RBP22.18■■□□□ 1.14
LTBP1-203ENST00000404816 MSH5O43196 834 aa22.18■■□□□ 1.14
LTBP1-203ENST00000404816 PCMTD1Q96MG8 357 aaPredicted RBP22.18■■□□□ 1.14
LTBP1-203ENST00000404816 ATP6V1DQ9Y5K8 247 aa22.18■■□□□ 1.14
LTBP1-203ENST00000404816 SKIDA1Q1XH10 827 aa22.18■■□□□ 1.14
LTBP1-203ENST00000404816 PDS5BQ9NTI5 1447 aa22.18■■□□□ 1.14
LTBP1-203ENST00000404816 APPP05067 770 aa22.17■■□□□ 1.14
LTBP1-203ENST00000404816 C22orf23Q9BZE7 217 aa22.17■■□□□ 1.14
LTBP1-203ENST00000404816 APAF1O14727 1248 aa22.17■■□□□ 1.14
LTBP1-203ENST00000404816 CAVIN1Q6NZI2 390 aaKnown RBP22.16■■□□□ 1.14
LTBP1-203ENST00000404816 HNRNPMP52272 730 aaKnown RBP eCLIP22.16■■□□□ 1.145e-7■■■■■ 41.2
LTBP1-203ENST00000404816 MNS1Q8NEH6 495 aa22.16■■□□□ 1.14
LTBP1-203ENST00000404816 CCDC39Q9UFE4 941 aa22.16■■□□□ 1.14
LTBP1-203ENST00000404816 CCDC70Q6NSX1 233 aa22.15■■□□□ 1.14
LTBP1-203ENST00000404816 TPM2P07951 284 aa22.14■■□□□ 1.14
LTBP1-203ENST00000404816 PHF23Q9BUL5 403 aaPredicted RBP22.14■■□□□ 1.13
LTBP1-203ENST00000404816 LNPKQ9C0E8 428 aa22.14■■□□□ 1.13
LTBP1-203ENST00000404816 E9PSI1 815 aa22.13■■□□□ 1.13
LTBP1-203ENST00000404816 TPM1P09493 284 aa22.13■■□□□ 1.13
LTBP1-203ENST00000404816 NECTIN2Q92692 538 aa22.13■■□□□ 1.13
LTBP1-203ENST00000404816 SMARCA4P51532 1647 aa22.13■■□□□ 1.13
LTBP1-203ENST00000404816 RAD21O60216 631 aa22.12■■□□□ 1.13
LTBP1-203ENST00000404816 PANK1Q8TE04 598 aa22.12■■□□□ 1.13
LTBP1-203ENST00000404816 NOM1Q5C9Z4 860 aaKnown RBP22.12■■□□□ 1.13
LTBP1-203ENST00000404816 SASS6Q6UVJ0 657 aa22.12■■□□□ 1.13
LTBP1-203ENST00000404816 DHX37Q8IY37 1157 aaKnown RBP22.12■■□□□ 1.13
LTBP1-203ENST00000404816 KLHL34Q8N239 644 aa22.12■■□□□ 1.13
LTBP1-203ENST00000404816 TCEAL9Q9UHQ7 104 aa22.12■■□□□ 1.13
LTBP1-203ENST00000404816 TTLL5Q6EMB2 1281 aa22.11■■□□□ 1.13
LTBP1-203ENST00000404816 KIF3AQ9Y496 699 aa22.11■■□□□ 1.13
LTBP1-203ENST00000404816 DIAPH3Q9NSV4 1193 aa22.1■■□□□ 1.13
LTBP1-203ENST00000404816 CCDC27Q2M243 656 aa22.1■■□□□ 1.13
LTBP1-203ENST00000404816 PHLDB1Q86UU1 1377 aa22.1■■□□□ 1.13
LTBP1-203ENST00000404816 CGNL1Q0VF96 1302 aa22.1■■□□□ 1.13
LTBP1-203ENST00000404816 SPC24Q8NBT2 197 aa22.09■■□□□ 1.13
LTBP1-203ENST00000404816 GTF2E1P29083 439 aaPredicted RBP22.09■■□□□ 1.13
LTBP1-203ENST00000404816 ARGLU1Q9NWB6 273 aaPredicted RBP22.08■■□□□ 1.13
LTBP1-203ENST00000404816 PRDM10Q9NQV6 1147 aa22.08■■□□□ 1.13
LTBP1-203ENST00000404816 KDM4AO75164 1064 aa22.08■■□□□ 1.12
LTBP1-203ENST00000404816 AMPHP49418 695 aa22.08■■□□□ 1.12
LTBP1-203ENST00000404816 CTDP1Q9Y5B0 961 aaPredicted RBP22.08■■□□□ 1.12
LTBP1-203ENST00000404816 NGEFQ8N5V2 710 aa22.07■■□□□ 1.12
LTBP1-203ENST00000404816 EIF3AQ14152 1382 aaKnown RBP22.06■■□□□ 1.12
LTBP1-203ENST00000404816 NGDNQ8NEJ9 315 aaKnown RBP22.06■■□□□ 1.12
LTBP1-203ENST00000404816 TRAK1Q9UPV9 953 aa22.06■■□□□ 1.12
LTBP1-203ENST00000404816 CADPSQ9ULU8 1353 aa22.06■■□□□ 1.12
LTBP1-203ENST00000404816 PDILTQ8N807 584 aa22.06■■□□□ 1.12
LTBP1-203ENST00000404816 SMC3Q9UQE7 1217 aa22.06■■□□□ 1.12
LTBP1-203ENST00000404816 RUFY1Q96T51 708 aa22.05■■□□□ 1.12
LTBP1-203ENST00000404816 CCDC18Q5T9S5 1454 aa22.05■■□□□ 1.12
LTBP1-203ENST00000404816 REC8O95072 547 aa22.05■■□□□ 1.12
LTBP1-203ENST00000404816 PRPF40AO75400 957 aaKnown RBP22.05■■□□□ 1.12
LTBP1-203ENST00000404816 UQCRHLA0A096LP55 91 aa22.04■■□□□ 1.12
LTBP1-203ENST00000404816 UQCRHP07919 91 aa22.04■■□□□ 1.12
LTBP1-203ENST00000404816 EFCAB2Q5VUJ9 269 aa22.04■■□□□ 1.12
LTBP1-203ENST00000404816 CWC22Q9HCG8 908 aaKnown RBP22.04■■□□□ 1.12
LTBP1-203ENST00000404816 ATAD2BQ9ULI0 1458 aa22.04■■□□□ 1.12
LTBP1-203ENST00000404816 NUCB2P80303 420 aa22.04■■□□□ 1.12
LTBP1-203ENST00000404816 DZIP1LQ8IYY4 767 aaKnown RBP22.04■■□□□ 1.12
LTBP1-203ENST00000404816 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.04■■□□□ 1.121e-6■■■■■ 194.7
LTBP1-203ENST00000404816 MAP7D2Q96T17 732 aa22.04■■□□□ 1.12
LTBP1-203ENST00000404816 DCAF8L1A6NGE4 600 aa22.03■■□□□ 1.12
LTBP1-203ENST00000404816 H0YHG0 523 aa22.02■■□□□ 1.12
LTBP1-203ENST00000404816 NAP1L1P55209 391 aaKnown RBP22.02■■□□□ 1.12
LTBP1-203ENST00000404816 AK7Q96M32 723 aa22.01■■□□□ 1.11
LTBP1-203ENST00000404816 HSP90B2PQ58FF3 399 aa22.01■■□□□ 1.11
LTBP1-203ENST00000404816 DDX19BQ9UMR2 479 aa22.01■■□□□ 1.11
LTBP1-203ENST00000404816 PLCD4Q9BRC7 762 aa22.01■■□□□ 1.11
LTBP1-203ENST00000404816 KIF3BO15066 747 aa22■■□□□ 1.11
LTBP1-203ENST00000404816 ERICH4A6NGS2 130 aa22■■□□□ 1.11
LTBP1-203ENST00000404816 CCDC66A2RUB6 948 aa22■■□□□ 1.11
LTBP1-203ENST00000404816 MTERF4Q7Z6M4 381 aaKnown RBP22■■□□□ 1.11
LTBP1-203ENST00000404816 CDCA7LQ96GN5 454 aa21.99■■□□□ 1.11
LTBP1-203ENST00000404816 USP47Q96K76 1375 aa21.99■■□□□ 1.11
LTBP1-203ENST00000404816 RRP12Q5JTH9 1297 aaKnown RBP21.99■■□□□ 1.11
LTBP1-203ENST00000404816 MEX3CQ5U5Q3 659 aaKnown RBP21.99■■□□□ 1.11
LTBP1-203ENST00000404816 TRIM34Q9BYJ4 488 aa21.99■■□□□ 1.11
LTBP1-203ENST00000404816 CCDC173Q0VFZ6 552 aa21.99■■□□□ 1.11
LTBP1-203ENST00000404816 TERF2IPQ9NYB0 399 aa21.99■■□□□ 1.11
LTBP1-203ENST00000404816 TSPY26PQ9H489 355 aa21.99■■□□□ 1.11
LTBP1-203ENST00000404816 IPO7O95373 1038 aaKnown RBP21.98■■□□□ 1.11
LTBP1-203ENST00000404816 AKAP17AQ02040 695 aaKnown RBP21.98■■□□□ 1.11
LTBP1-203ENST00000404816 LMOD3Q0VAK6 560 aa21.98■■□□□ 1.11
LTBP1-203ENST00000404816 TRIM5Q9C035 493 aa21.98■■□□□ 1.11
LTBP1-203ENST00000404816 EIF2S2P20042 333 aaKnown RBP21.98■■□□□ 1.11
LTBP1-203ENST00000404816 INTS3Q68E01 1043 aaKnown RBP21.98■■□□□ 1.11
LTBP1-203ENST00000404816 ZKSCAN1P17029 563 aaPredicted RBP21.97■■□□□ 1.11
LTBP1-203ENST00000404816 HSP90AB3PQ58FF7 597 aa21.96■■□□□ 1.11
LTBP1-203ENST00000404816 CWC15Q9P013 229 aaKnown RBP21.96■■□□□ 1.11
LTBP1-203ENST00000404816 AKNAQ7Z591 1439 aa21.96■■□□□ 1.11
LTBP1-203ENST00000404816 TRIM29Q14134 588 aa21.95■■□□□ 1.11
LTBP1-203ENST00000404816 GRPEL1Q9HAV7 217 aa21.95■■□□□ 1.11
LTBP1-203ENST00000404816 SMC2O95347 1197 aa21.94■■□□□ 1.1
LTBP1-203ENST00000404816 CAGE1Q8TC20 777 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms