RNA–Protein interactions for RNA: ENST00000403537.3

THUMPD2-202, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-202ENST00000403537 PLEKHG1Q9ULL1 1385 aa26.7■■□□□ 1.86
THUMPD2-202ENST00000403537 TRIM52Q96A61 297 aa26.69■■□□□ 1.86
THUMPD2-202ENST00000403537 LRRC7Q96NW7 1537 aa26.69■■□□□ 1.86
THUMPD2-202ENST00000403537 ACIN1Q9UKV3 1341 aaKnown RBP26.68■■□□□ 1.86
THUMPD2-202ENST00000403537 TRIM26Q12899 539 aaPredicted RBP26.68■■□□□ 1.86
THUMPD2-202ENST00000403537 KCNA6P17658 529 aa26.67■■□□□ 1.86
THUMPD2-202ENST00000403537 RAB3GAP2Q9H2M9 1393 aa26.67■■□□□ 1.86
THUMPD2-202ENST00000403537 SLC26A8Q96RN1 970 aa26.66■■□□□ 1.86
THUMPD2-202ENST00000403537 SPHKAPQ2M3C7 1700 aa26.62■■□□□ 1.85
THUMPD2-202ENST00000403537 STRCP1A6NGW2 1772 aa26.61■■□□□ 1.85
THUMPD2-202ENST00000403537 SLC4A1APQ9BWU0 796 aaKnown RBP26.61■■□□□ 1.85
THUMPD2-202ENST00000403537 TBX22Q9Y458 520 aa26.61■■□□□ 1.85
THUMPD2-202ENST00000403537 SCAF1Q9H7N4 1312 aaKnown RBP26.61■■□□□ 1.85
THUMPD2-202ENST00000403537 PIP4K2BP78356 416 aa26.59■■□□□ 1.85
THUMPD2-202ENST00000403537 TRPM2O94759 1503 aa26.59■■□□□ 1.85
THUMPD2-202ENST00000403537 MYO5BQ9ULV0 1848 aa26.58■■□□□ 1.85
THUMPD2-202ENST00000403537 NKTRP30414 1462 aaKnown RBP26.58■■□□□ 1.85
THUMPD2-202ENST00000403537 PROSER2Q86WR7 435 aaPredicted RBP26.56■■□□□ 1.84
THUMPD2-202ENST00000403537 ZNF326Q5BKZ1 582 aaKnown RBP26.55■■□□□ 1.84
THUMPD2-202ENST00000403537 DIP2AQ14689 1571 aa26.54■■□□□ 1.84
THUMPD2-202ENST00000403537 PIK3R4Q99570 1358 aa26.54■■□□□ 1.84
THUMPD2-202ENST00000403537 NWD1Q149M9 1564 aa26.54■■□□□ 1.84
THUMPD2-202ENST00000403537 TMEM94Q12767 1356 aa26.53■■□□□ 1.84
THUMPD2-202ENST00000403537 NUTM2DQ5VT03 806 aaPredicted RBP26.5■■□□□ 1.83
THUMPD2-202ENST00000403537 ADAMTS13Q76LX8 1427 aa26.49■■□□□ 1.83
THUMPD2-202ENST00000403537 CLTCL1P53675 1640 aa26.49■■□□□ 1.83
THUMPD2-202ENST00000403537 ALKQ9UM73 1620 aa26.47■■□□□ 1.83
THUMPD2-202ENST00000403537 HSPA1LP34931 641 aa26.46■■□□□ 1.83
THUMPD2-202ENST00000403537 SENP3Q9H4L4 574 aaPredicted RBP26.46■■□□□ 1.83
THUMPD2-202ENST00000403537 NCOA3Q9Y6Q9 1424 aa26.46■■□□□ 1.83
THUMPD2-202ENST00000403537 RPGRIP1LQ68CZ1 1315 aa26.45■■□□□ 1.83
THUMPD2-202ENST00000403537 MSH6P52701 1360 aa26.45■■□□□ 1.82
THUMPD2-202ENST00000403537 MPHOSPH9Q99550 1183 aa26.44■■□□□ 1.82
THUMPD2-202ENST00000403537 SETBP1Q9Y6X0 1596 aa26.43■■□□□ 1.82
THUMPD2-202ENST00000403537 VGFO15240 615 aaPredicted RBP26.43■■□□□ 1.82
THUMPD2-202ENST00000403537 FOXD1Q16676 465 aa26.43■■□□□ 1.82
THUMPD2-202ENST00000403537 PCGF6Q9BYE7 350 aa26.43■■□□□ 1.82
THUMPD2-202ENST00000403537 CHD2O14647 1828 aaKnown RBP26.43■■□□□ 1.82
THUMPD2-202ENST00000403537 KIF1BO60333 1816 aa26.42■■□□□ 1.82
THUMPD2-202ENST00000403537 DISP3Q9P2K9 1392 aa26.41■■□□□ 1.82
THUMPD2-202ENST00000403537 XIRP1Q702N8 1843 aaKnown RBP26.4■■□□□ 1.82
THUMPD2-202ENST00000403537 HRCP23327 699 aa26.4■■□□□ 1.82
THUMPD2-202ENST00000403537 CCDC144AA2RUR9 1427 aa26.39■■□□□ 1.82
THUMPD2-202ENST00000403537 NEXMIFQ5QGS0 1516 aa26.39■■□□□ 1.82
THUMPD2-202ENST00000403537 FAM135BQ49AJ0 1406 aa26.39■■□□□ 1.81
THUMPD2-202ENST00000403537 AMOTL2Q9Y2J4 779 aa26.38■■□□□ 1.81
THUMPD2-202ENST00000403537 C14orf37Q86TY3 774 aa26.35■■□□□ 1.81
THUMPD2-202ENST00000403537 RBM33Q96EV2 1170 aaKnown RBP26.35■■□□□ 1.81
THUMPD2-202ENST00000403537 C19orf44Q9H6X5 657 aa26.33■■□□□ 1.81
THUMPD2-202ENST00000403537 NRXN3Q9Y4C0 1643 aa26.32■■□□□ 1.8
THUMPD2-202ENST00000403537 CADPS2Q86UW7 1296 aa26.31■■□□□ 1.8
THUMPD2-202ENST00000403537 SLAIN2Q9P270 581 aa26.31■■□□□ 1.8
THUMPD2-202ENST00000403537 PTPRUQ92729 1446 aa26.31■■□□□ 1.8
THUMPD2-202ENST00000403537 METP08581 1390 aa26.29■■□□□ 1.8
THUMPD2-202ENST00000403537 ATF3P18847 181 aa26.28■■□□□ 1.8
THUMPD2-202ENST00000403537 ANKRD30BQ9BXX2 1392 aa26.27■■□□□ 1.8
THUMPD2-202ENST00000403537 XRN1Q8IZH2 1706 aaKnown RBP26.25■■□□□ 1.79
THUMPD2-202ENST00000403537 SPATA31E1Q6ZUB1 1445 aa26.25■■□□□ 1.79
THUMPD2-202ENST00000403537 DCCP43146 1447 aa26.24■■□□□ 1.79
THUMPD2-202ENST00000403537 RGL3Q3MIN7 710 aa26.22■■□□□ 1.79
THUMPD2-202ENST00000403537 DHX57Q6P158 1386 aaKnown RBP26.21■■□□□ 1.79
THUMPD2-202ENST00000403537 ROBO1Q9Y6N7 1651 aa26.21■■□□□ 1.79
THUMPD2-202ENST00000403537 PPLO60437 1756 aa26.2■■□□□ 1.79
THUMPD2-202ENST00000403537 PTCH1Q13635 1447 aa26.18■■□□□ 1.78
THUMPD2-202ENST00000403537 PRAG1Q86YV5 1406 aa26.18■■□□□ 1.78
THUMPD2-202ENST00000403537 MED1Q15648 1581 aaPredicted RBP26.17■■□□□ 1.78
THUMPD2-202ENST00000403537 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.17■■□□□ 1.78
THUMPD2-202ENST00000403537 ADGRL3Q9HAR2 1447 aa26.15■■□□□ 1.78
THUMPD2-202ENST00000403537 ADGRF5Q8IZF2 1346 aa26.14■■□□□ 1.78
THUMPD2-202ENST00000403537 PHF23Q9BUL5 403 aaPredicted RBP26.12■■□□□ 1.77
THUMPD2-202ENST00000403537 SETD1AO15047 1707 aaKnown RBP26.11■■□□□ 1.77
THUMPD2-202ENST00000403537 ROBO2Q9HCK4 1378 aa26.08■■□□□ 1.77
THUMPD2-202ENST00000403537 PIK3C2GO75747 1445 aa26.08■■□□□ 1.77
THUMPD2-202ENST00000403537 ILDR2Q71H61 639 aa26.08■■□□□ 1.77
THUMPD2-202ENST00000403537 IFT172Q9UG01 1749 aa26.08■■□□□ 1.76
THUMPD2-202ENST00000403537 JCADQ9P266 1359 aa26.07■■□□□ 1.76
THUMPD2-202ENST00000403537 MYOM2P54296 1465 aa26.06■■□□□ 1.76
THUMPD2-202ENST00000403537 BRINP3Q76B58 766 aa26.06■■□□□ 1.76
THUMPD2-202ENST00000403537 STAC3Q96MF2 364 aa26.06■■□□□ 1.76
THUMPD2-202ENST00000403537 MST1RQ04912 1400 aa26.05■■□□□ 1.76
THUMPD2-202ENST00000403537 LRPPRCP42704 1394 aaKnown RBP26.05■■□□□ 1.76
THUMPD2-202ENST00000403537 PHLPP1O60346 1717 aa26.05■■□□□ 1.76
THUMPD2-202ENST00000403537 ABCC11Q96J66 1382 aa26.04■■□□□ 1.76
THUMPD2-202ENST00000403537 AHDC1Q5TGY3 1603 aaPredicted RBP26.03■■□□□ 1.76
THUMPD2-202ENST00000403537 TECPR2O15040 1411 aa26.03■■□□□ 1.76
THUMPD2-202ENST00000403537 C14orf93Q9H972 538 aaKnown RBP26.02■■□□□ 1.76
THUMPD2-202ENST00000403537 NRXN1Q9ULB1 1477 aa26.02■■□□□ 1.76
THUMPD2-202ENST00000403537 NALCNQ8IZF0 1738 aa26■■□□□ 1.75
THUMPD2-202ENST00000403537 ASXL1Q8IXJ9 1541 aa25.99■■□□□ 1.75
THUMPD2-202ENST00000403537 SIN3AQ96ST3 1273 aa25.99■■□□□ 1.75
THUMPD2-202ENST00000403537 SOCS7O14512 581 aa25.98■■□□□ 1.75
THUMPD2-202ENST00000403537 SIRT1Q96EB6 747 aa25.98■■□□□ 1.75
THUMPD2-202ENST00000403537 STK26Q9P289 416 aa25.98■■□□□ 1.75
THUMPD2-202ENST00000403537 COL16A1Q07092 1604 aaPredicted RBP25.98■■□□□ 1.75
THUMPD2-202ENST00000403537 SPATA31A6Q5VVP1 1343 aa25.97■■□□□ 1.75
THUMPD2-202ENST00000403537 LAMC1P11047 1609 aa25.97■■□□□ 1.75
THUMPD2-202ENST00000403537 YTHDC2Q9H6S0 1430 aaKnown RBP25.97■■□□□ 1.75
THUMPD2-202ENST00000403537 TMEM132EQ6IEE7 984 aa25.96■■□□□ 1.75
THUMPD2-202ENST00000403537 C1orf167Q5SNV9 1468 aa25.96■■□□□ 1.75
THUMPD2-202ENST00000403537 CFAP70Q5T0N1 1121 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms