RNA–Protein interactions for RNA: ENST00000402412.5

R3HDM2-204, Transcript of R3H domain containing 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,372 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-204ENST00000402412 SPAG9O60271 1321 aaKnown RBP17.36■□□□□ 0.37
R3HDM2-204ENST00000402412 APAF1O14727 1248 aa17.36■□□□□ 0.37
R3HDM2-204ENST00000402412 NLRP13Q86W25 1043 aa17.36■□□□□ 0.37
R3HDM2-204ENST00000402412 GOLGA6L4A6NEF3 574 aa17.36■□□□□ 0.37
R3HDM2-204ENST00000402412 WDR7Q9Y4E6 1490 aa17.36■□□□□ 0.37
R3HDM2-204ENST00000402412 IPO9Q96P70 1041 aaKnown RBP17.35■□□□□ 0.37
R3HDM2-204ENST00000402412 PLCH2O75038 1416 aa17.35■□□□□ 0.37
R3HDM2-204ENST00000402412 ASXL2Q76L83 1435 aa17.33■□□□□ 0.37
R3HDM2-204ENST00000402412 ZCCHC11Q5TAX3 1644 aaKnown RBP17.33■□□□□ 0.37
R3HDM2-204ENST00000402412 CRBNQ96SW2 442 aa17.33■□□□□ 0.37
R3HDM2-204ENST00000402412 CDK11BP21127 795 aaKnown RBP17.33■□□□□ 0.36
R3HDM2-204ENST00000402412 NECTIN2Q92692 538 aa17.32■□□□□ 0.36
R3HDM2-204ENST00000402412 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.31■□□□□ 0.36
R3HDM2-204ENST00000402412 RALBP1Q15311 655 aa17.31■□□□□ 0.36
R3HDM2-204ENST00000402412 MAPKBP1O60336 1514 aa17.31■□□□□ 0.36
R3HDM2-204ENST00000402412 TRIM6-TRIM34B2RNG4 842 aa17.31■□□□□ 0.36
R3HDM2-204ENST00000402412 HDGFL2Q7Z4V5 671 aaPredicted RBP17.3■□□□□ 0.36
R3HDM2-204ENST00000402412 PDE4AP27815 886 aa17.3■□□□□ 0.36
R3HDM2-204ENST00000402412 ISY1Q9ULR0 285 aaKnown RBP17.3■□□□□ 0.36
R3HDM2-204ENST00000402412 RWDD1Q9H446 243 aaPredicted RBP17.29■□□□□ 0.36
R3HDM2-204ENST00000402412 KIAA1107Q9UPP5 1409 aa17.29■□□□□ 0.36
R3HDM2-204ENST00000402412 CHMP3Q9Y3E7 222 aa17.29■□□□□ 0.36
R3HDM2-204ENST00000402412 SHANK2Q9UPX8 1470 aa17.29■□□□□ 0.36
R3HDM2-204ENST00000402412 CSB-PGBD3P0DP91 1061 aa17.28■□□□□ 0.36
R3HDM2-204ENST00000402412 CDC42BPAQ5VT25 1732 aa17.28■□□□□ 0.36
R3HDM2-204ENST00000402412 MS4A1P11836 297 aa17.28■□□□□ 0.36
R3HDM2-204ENST00000402412 AFAP1Q8N556 730 aa17.28■□□□□ 0.36
R3HDM2-204ENST00000402412 WASHC2CQ9Y4E1 1318 aa17.27■□□□□ 0.36
R3HDM2-204ENST00000402412 KANK1Q14678 1352 aa17.27■□□□□ 0.36
R3HDM2-204ENST00000402412 SYCP2Q9BX26 1530 aa17.27■□□□□ 0.36
R3HDM2-204ENST00000402412 CENPJQ9HC77 1338 aaPredicted RBP17.27■□□□□ 0.36
R3HDM2-204ENST00000402412 ADGRL2O95490 1459 aa17.27■□□□□ 0.35
R3HDM2-204ENST00000402412 TTC37Q6PGP7 1564 aa17.26■□□□□ 0.35
R3HDM2-204ENST00000402412 DRC7Q8IY82 874 aa17.26■□□□□ 0.35
R3HDM2-204ENST00000402412 NCBP3Q53F19 620 aaKnown RBP17.26■□□□□ 0.35
R3HDM2-204ENST00000402412 ZNF428Q96B54 188 aa17.26■□□□□ 0.35
R3HDM2-204ENST00000402412 GCC2Q8IWJ2 1684 aa17.26■□□□□ 0.35
R3HDM2-204ENST00000402412 CDCA7LQ96GN5 454 aa17.26■□□□□ 0.35
R3HDM2-204ENST00000402412 IPO8O15397 1037 aaKnown RBP17.26■□□□□ 0.35
R3HDM2-204ENST00000402412 MINK1Q8N4C8 1332 aaPredicted RBP17.25■□□□□ 0.35
R3HDM2-204ENST00000402412 PREX2Q70Z35 1606 aa17.25■□□□□ 0.35
R3HDM2-204ENST00000402412 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.24■□□□□ 0.35
R3HDM2-204ENST00000402412 FANCAO15360 1455 aa17.24■□□□□ 0.35
R3HDM2-204ENST00000402412 NGEFQ8N5V2 710 aa17.24■□□□□ 0.35
R3HDM2-204ENST00000402412 MYO5CQ9NQX4 1742 aa17.24■□□□□ 0.35
R3HDM2-204ENST00000402412 CD109Q6YHK3 1445 aa17.23■□□□□ 0.35
R3HDM2-204ENST00000402412 NGDNQ8NEJ9 315 aaKnown RBP17.23■□□□□ 0.35
R3HDM2-204ENST00000402412 SCAPERQ9BY12 1400 aa17.23■□□□□ 0.35
R3HDM2-204ENST00000402412 MSNP26038 577 aaKnown RBP17.23■□□□□ 0.35
R3HDM2-204ENST00000402412 ARHGEF5Q12774 1597 aa17.23■□□□□ 0.35
R3HDM2-204ENST00000402412 MBD5Q9P267 1494 aa17.23■□□□□ 0.35
R3HDM2-204ENST00000402412 CCDC184Q52MB2 194 aa17.22■□□□□ 0.35
R3HDM2-204ENST00000402412 KIAA1211Q6ZU35 1233 aa17.22■□□□□ 0.35
R3HDM2-204ENST00000402412 SAMD9LQ8IVG5 1584 aa17.22■□□□□ 0.35
R3HDM2-204ENST00000402412 ANKRD45Q5TZF3 282 aa17.21■□□□□ 0.35
R3HDM2-204ENST00000402412 ADGBQ8N7X0 1667 aa17.2■□□□□ 0.34
R3HDM2-204ENST00000402412 ADGRL1O94910 1474 aa17.2■□□□□ 0.34
R3HDM2-204ENST00000402412 FAM69CQ0P6D2 419 aa17.2■□□□□ 0.34
R3HDM2-204ENST00000402412 PNNQ9H307 717 aaKnown RBP17.2■□□□□ 0.34
R3HDM2-204ENST00000402412 TMEM132EQ6IEE7 984 aa17.19■□□□□ 0.34
R3HDM2-204ENST00000402412 RRP1P56182 461 aaKnown RBP17.19■□□□□ 0.34
R3HDM2-204ENST00000402412 AMPHP49418 695 aa17.18■□□□□ 0.34
R3HDM2-204ENST00000402412 STK31Q9BXU1 1019 aa17.17■□□□□ 0.34
R3HDM2-204ENST00000402412 CHMP4BQ9H444 224 aaKnown RBP17.17■□□□□ 0.34
R3HDM2-204ENST00000402412 RILPL2Q969X0 211 aa17.17■□□□□ 0.34
R3HDM2-204ENST00000402412 TRAPPC8Q9Y2L5 1435 aa17.17■□□□□ 0.34
R3HDM2-204ENST00000402412 ANO8Q9HCE9 1232 aaPredicted RBP17.17■□□□□ 0.34
R3HDM2-204ENST00000402412 CDC42BPBQ9Y5S2 1711 aa17.16■□□□□ 0.34
R3HDM2-204ENST00000402412 USP47Q96K76 1375 aa17.16■□□□□ 0.34
R3HDM2-204ENST00000402412 SKAP1Q86WV1 359 aa17.16■□□□□ 0.34
R3HDM2-204ENST00000402412 PANK1Q8TE04 598 aa17.16■□□□□ 0.34
R3HDM2-204ENST00000402412 KDM6BO15054 1643 aa17.16■□□□□ 0.34
R3HDM2-204ENST00000402412 ANKRD30BQ9BXX2 1392 aa17.15■□□□□ 0.34
R3HDM2-204ENST00000402412 HMOX1P09601 288 aa17.15■□□□□ 0.34
R3HDM2-204ENST00000402412 MCCP23508 829 aa17.15■□□□□ 0.34
R3HDM2-204ENST00000402412 MYBBP1AQ9BQG0 1328 aaKnown RBP17.15■□□□□ 0.34
R3HDM2-204ENST00000402412 KIF7Q2M1P5 1343 aa17.14■□□□□ 0.33
R3HDM2-204ENST00000402412 EIF2S2P20042 333 aaKnown RBP17.14■□□□□ 0.33
R3HDM2-204ENST00000402412 C11orf95C9JLR9 678 aaPredicted RBP17.14■□□□□ 0.33
R3HDM2-204ENST00000402412 BCL11BQ9C0K0 894 aaPredicted RBP17.14■□□□□ 0.33
R3HDM2-204ENST00000402412 TERF2IPQ9NYB0 399 aa17.14■□□□□ 0.33
R3HDM2-204ENST00000402412 NUTM2GQ5VZR2 741 aa17.13■□□□□ 0.33
R3HDM2-204ENST00000402412 GGNBP2Q9H3C7 697 aa17.13■□□□□ 0.33
R3HDM2-204ENST00000402412 CREBRFQ8IUR6 639 aa17.12■□□□□ 0.33
R3HDM2-204ENST00000402412 ARAP3Q8WWN8 1544 aa17.12■□□□□ 0.33
R3HDM2-204ENST00000402412 WASHC2AQ641Q2 1341 aa17.12■□□□□ 0.33
R3HDM2-204ENST00000402412 GBP4Q96PP9 640 aa17.12■□□□□ 0.33
R3HDM2-204ENST00000402412 CROCC2H7BZ55 1655 aa17.12■□□□□ 0.33
R3HDM2-204ENST00000402412 L1TD1Q5T7N2 865 aaKnown RBP17.12■□□□□ 0.33
R3HDM2-204ENST00000402412 LNPKQ9C0E8 428 aa17.12■□□□□ 0.33
R3HDM2-204ENST00000402412 GOLGA6L3A6NEY3 463 aa17.12■□□□□ 0.33
R3HDM2-204ENST00000402412 GNL2Q13823 731 aaKnown RBP17.12■□□□□ 0.33
R3HDM2-204ENST00000402412 PMFBP1Q8TBY8 1022 aa17.12■□□□□ 0.33
R3HDM2-204ENST00000402412 GORABQ5T7V8 394 aa17.11■□□□□ 0.33
R3HDM2-204ENST00000402412 DUOX2Q9NRD8 1548 aa17.11■□□□□ 0.33
R3HDM2-204ENST00000402412 NBPF1Q3BBV0 1214 aa17.11■□□□□ 0.33
R3HDM2-204ENST00000402412 PDE4CQ08493 712 aa17.11■□□□□ 0.33
R3HDM2-204ENST00000402412 ABCC1P33527 1531 aa17.1■□□□□ 0.33
R3HDM2-204ENST00000402412 CALD1Q05682 793 aaKnown RBP17.1■□□□□ 0.33
R3HDM2-204ENST00000402412 ADAMTS8Q9UP79 889 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms