RNA–Protein interactions for RNA: ENST00000402280.5

NLRC4-203, Transcript of NLR family CARD domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC4, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-203ENST00000402280 ZC3H13Q5T200 1668 aaKnown RBP6.71□□□□□ -1.34
NLRC4-203ENST00000402280 MLH3Q9UHC1 1453 aa6.71□□□□□ -1.34
NLRC4-203ENST00000402280 ZBED9Q6R2W3 1325 aa6.71□□□□□ -1.34
NLRC4-203ENST00000402280 CCDC9Q9Y3X0 531 aaKnown RBP6.71□□□□□ -1.34
NLRC4-203ENST00000402280 SLC4A3P48751 1232 aa6.71□□□□□ -1.34
NLRC4-203ENST00000402280 AGLP35573 1532 aa6.7□□□□□ -1.34
NLRC4-203ENST00000402280 ARHGEF40Q8TER5 1519 aa6.7□□□□□ -1.34
NLRC4-203ENST00000402280 CD109Q6YHK3 1445 aa6.7□□□□□ -1.34
NLRC4-203ENST00000402280 ABCA6Q8N139 1617 aa6.7□□□□□ -1.34
NLRC4-203ENST00000402280 MROH1Q8NDA8 1641 aa6.7□□□□□ -1.34
NLRC4-203ENST00000402280 SMAP1Q8IYB5 467 aaPredicted RBP6.7□□□□□ -1.34
NLRC4-203ENST00000402280 FANCAO15360 1455 aa6.7□□□□□ -1.34
NLRC4-203ENST00000402280 SYCP2Q9BX26 1530 aa6.7□□□□□ -1.34
NLRC4-203ENST00000402280 ARHGAP5Q13017 1502 aa6.69□□□□□ -1.34
NLRC4-203ENST00000402280 NEURL4Q96JN8 1562 aa6.69□□□□□ -1.34
NLRC4-203ENST00000402280 POGZQ7Z3K3 1410 aa6.69□□□□□ -1.34
NLRC4-203ENST00000402280 MROH2AA6NES4 1674 aa6.69□□□□□ -1.34
NLRC4-203ENST00000402280 DIP2CQ9Y2E4 1556 aa6.69□□□□□ -1.34
NLRC4-203ENST00000402280 MTUS2Q5JR59 1369 aa6.69□□□□□ -1.34
NLRC4-203ENST00000402280 IQGAP3Q86VI3 1631 aa6.69□□□□□ -1.34
NLRC4-203ENST00000402280 MAP7D2Q96T17 732 aa6.69□□□□□ -1.34
NLRC4-203ENST00000402280 CCDC141Q6ZP82 1450 aa6.68□□□□□ -1.34
NLRC4-203ENST00000402280 PLEKHD1A6NEE1 506 aa6.68□□□□□ -1.34
NLRC4-203ENST00000402280 POGKQ9P215 609 aa6.68□□□□□ -1.34
NLRC4-203ENST00000402280 ZHX1Q9UKY1 873 aaPredicted RBP6.68□□□□□ -1.34
NLRC4-203ENST00000402280 DAPK1P53355 1430 aa6.68□□□□□ -1.34
NLRC4-203ENST00000402280 KDM6BO15054 1643 aa6.68□□□□□ -1.34
NLRC4-203ENST00000402280 FAM9BQ8IZU0 186 aa6.68□□□□□ -1.34
NLRC4-203ENST00000402280 LMTK2Q8IWU2 1503 aa6.68□□□□□ -1.34
NLRC4-203ENST00000402280 ABCC5O15440 1437 aa6.68□□□□□ -1.34
NLRC4-203ENST00000402280 TEX2Q8IWB9 1127 aa6.68□□□□□ -1.34
NLRC4-203ENST00000402280 WWC1Q8IX03 1113 aa6.68□□□□□ -1.34
NLRC4-203ENST00000402280 RNF123Q5XPI4 1314 aa6.67□□□□□ -1.34
NLRC4-203ENST00000402280 PRDM15P57071 1507 aaPredicted RBP6.67□□□□□ -1.34
NLRC4-203ENST00000402280 COL17A1Q9UMD9 1497 aaPredicted RBP6.67□□□□□ -1.34
NLRC4-203ENST00000402280 CCNB3Q8WWL7 1395 aa6.67□□□□□ -1.34
NLRC4-203ENST00000402280 ATP7AQ04656 1500 aa6.67□□□□□ -1.34
NLRC4-203ENST00000402280 ZNF518AQ6AHZ1 1483 aa6.66□□□□□ -1.34
NLRC4-203ENST00000402280 XRCC6P12956 609 aaKnown RBP eCLIP6.66□□□□□ -1.34
NLRC4-203ENST00000402280 HFM1A2PYH4 1435 aa6.66□□□□□ -1.34
NLRC4-203ENST00000402280 DUOX2Q9NRD8 1548 aa6.66□□□□□ -1.34
NLRC4-203ENST00000402280 ESPNB1AK53 854 aa6.66□□□□□ -1.34
NLRC4-203ENST00000402280 NPM1P06748 294 aaKnown RBP eCLIP6.66□□□□□ -1.34
NLRC4-203ENST00000402280 KDM5AP29375 1690 aaKnown RBP6.66□□□□□ -1.34
NLRC4-203ENST00000402280 FTSJ3Q8IY81 847 aaKnown RBP6.66□□□□□ -1.34
NLRC4-203ENST00000402280 SMG6Q86US8 1419 aaKnown RBP6.66□□□□□ -1.34
NLRC4-203ENST00000402280 GOLGA6L3A6NEY3 463 aa6.65□□□□□ -1.34
NLRC4-203ENST00000402280 PTPRKQ15262 1439 aa6.65□□□□□ -1.34
NLRC4-203ENST00000402280 ADGRL1O94910 1474 aa6.65□□□□□ -1.34
NLRC4-203ENST00000402280 UTP14CQ5TAP6 766 aaKnown RBP6.65□□□□□ -1.35
NLRC4-203ENST00000402280 ERBINQ96RT1 1412 aa6.65□□□□□ -1.35
NLRC4-203ENST00000402280 TNNT2P45379 298 aaPredicted RBP6.65□□□□□ -1.35
NLRC4-203ENST00000402280 PLCB2Q00722 1185 aa6.65□□□□□ -1.35
NLRC4-203ENST00000402280 KIAA1211Q6ZU35 1233 aa6.64□□□□□ -1.35
NLRC4-203ENST00000402280 PLCD3Q8N3E9 789 aa6.64□□□□□ -1.35
NLRC4-203ENST00000402280 NUDCQ9Y266 331 aa6.64□□□□□ -1.35
NLRC4-203ENST00000402280 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.64□□□□□ -1.35
NLRC4-203ENST00000402280 CCDC184Q52MB2 194 aa6.64□□□□□ -1.35
NLRC4-203ENST00000402280 ZNF592Q92610 1267 aa6.64□□□□□ -1.35
NLRC4-203ENST00000402280 TMEM51Q9NW97 253 aa6.64□□□□□ -1.35
NLRC4-203ENST00000402280 TMED8Q6PL24 325 aaPredicted RBP6.63□□□□□ -1.35
NLRC4-203ENST00000402280 KCNG1Q9UIX4 513 aa6.63□□□□□ -1.35
NLRC4-203ENST00000402280 TRAPPC8Q9Y2L5 1435 aa6.63□□□□□ -1.35
NLRC4-203ENST00000402280 TET3O43151 1660 aa6.63□□□□□ -1.35
NLRC4-203ENST00000402280 MRS2Q9HD23 443 aa6.63□□□□□ -1.35
NLRC4-203ENST00000402280 DMTNQ08495 405 aa6.63□□□□□ -1.35
NLRC4-203ENST00000402280 PPP4R3BQ5MIZ7 849 aa6.63□□□□□ -1.35
NLRC4-203ENST00000402280 ZNF830Q96NB3 372 aaPredicted RBP6.63□□□□□ -1.35
NLRC4-203ENST00000402280 PANK2Q9BZ23 570 aa6.63□□□□□ -1.35
NLRC4-203ENST00000402280 DENND4BO75064 1496 aaPredicted RBP6.62□□□□□ -1.35
NLRC4-203ENST00000402280 FAM13BQ9NYF5 915 aa6.62□□□□□ -1.35
NLRC4-203ENST00000402280 NCOA1Q15788 1441 aa6.62□□□□□ -1.35
NLRC4-203ENST00000402280 FAM69CQ0P6D2 419 aa6.62□□□□□ -1.35
NLRC4-203ENST00000402280 MYH16Q9H6N6 1097 aa6.62□□□□□ -1.35
NLRC4-203ENST00000402280 ADAMTSL3P82987 1691 aa6.62□□□□□ -1.35
NLRC4-203ENST00000402280 FSD2A1L4K1 749 aa6.61□□□□□ -1.35
NLRC4-203ENST00000402280 NAIPQ13075 1403 aa6.61□□□□□ -1.35
NLRC4-203ENST00000402280 MTERF4Q7Z6M4 381 aaKnown RBP6.61□□□□□ -1.35
NLRC4-203ENST00000402280 ANP32BQ92688 251 aaKnown RBP6.61□□□□□ -1.35
NLRC4-203ENST00000402280 TRIM44Q96DX7 344 aaPredicted RBP6.61□□□□□ -1.35
NLRC4-203ENST00000402280 PIK3C2BO00750 1634 aa6.61□□□□□ -1.35
NLRC4-203ENST00000402280 VGLL3A8MV65 326 aa6.61□□□□□ -1.35
NLRC4-203ENST00000402280 ATP10AO60312 1499 aa6.61□□□□□ -1.35
NLRC4-203ENST00000402280 ARID3CA6NKF2 412 aa6.61□□□□□ -1.35
NLRC4-203ENST00000402280 CHRM1P11229 460 aaPredicted RBP6.61□□□□□ -1.35
NLRC4-203ENST00000402280 TICAM2Q86XR7 235 aa6.61□□□□□ -1.35
NLRC4-203ENST00000402280 C9orf84Q5VXU9 1444 aa6.6□□□□□ -1.35
NLRC4-203ENST00000402280 TERF1P54274 439 aa6.6□□□□□ -1.35
NLRC4-203ENST00000402280 RIPK4P57078 832 aa6.6□□□□□ -1.35
NLRC4-203ENST00000402280 RAB3GAP2Q9H2M9 1393 aa6.6□□□□□ -1.35
NLRC4-203ENST00000402280 ERBB4Q15303 1308 aa6.6□□□□□ -1.35
NLRC4-203ENST00000402280 SCAPERQ9BY12 1400 aa6.6□□□□□ -1.35
NLRC4-203ENST00000402280 MRE11P49959 708 aa6.6□□□□□ -1.35
NLRC4-203ENST00000402280 RNF216Q9NWF9 866 aaPredicted RBP6.6□□□□□ -1.35
NLRC4-203ENST00000402280 IFT172Q9UG01 1749 aa6.6□□□□□ -1.35
NLRC4-203ENST00000402280 EXOC6Q8TAG9 804 aa6.6□□□□□ -1.35
NLRC4-203ENST00000402280 KIF20AO95235 890 aa6.59□□□□□ -1.35
NLRC4-203ENST00000402280 CAMSAP1Q5T5Y3 1602 aa6.59□□□□□ -1.35
NLRC4-203ENST00000402280 CEP152O94986 1710 aa6.59□□□□□ -1.35
NLRC4-203ENST00000402280 EFCAB2Q5VUJ9 269 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms