RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 TMEM132EQ6IEE7 984 aa22.33■■□□□ 1.16
SNRNP70-202ENST00000401730 SAFB2Q14151 953 aaKnown RBP eCLIP22.32■■□□□ 1.16
SNRNP70-202ENST00000401730 WASHC2CQ9Y4E1 1318 aa22.32■■□□□ 1.16
SNRNP70-202ENST00000401730 E9PCH4 1651 aa22.31■■□□□ 1.16
SNRNP70-202ENST00000401730 DUOX2Q9NRD8 1548 aa22.31■■□□□ 1.16
SNRNP70-202ENST00000401730 PRDM15P57071 1507 aaPredicted RBP22.31■■□□□ 1.16
SNRNP70-202ENST00000401730 ABCC2Q92887 1545 aa22.3■■□□□ 1.16
SNRNP70-202ENST00000401730 CARD14Q9BXL6 1004 aa22.29■■□□□ 1.16
SNRNP70-202ENST00000401730 WDR7Q9Y4E6 1490 aa22.29■■□□□ 1.16
SNRNP70-202ENST00000401730 NEFMP07197 916 aa22.28■■□□□ 1.16
SNRNP70-202ENST00000401730 CDCA8Q53HL2 280 aa22.28■■□□□ 1.16
SNRNP70-202ENST00000401730 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.27■■□□□ 1.16
SNRNP70-202ENST00000401730 UNC13BO14795 1591 aa22.26■■□□□ 1.15
SNRNP70-202ENST00000401730 MYO5CQ9NQX4 1742 aa22.26■■□□□ 1.15
SNRNP70-202ENST00000401730 UGGT1Q9NYU2 1555 aa22.26■■□□□ 1.15
SNRNP70-202ENST00000401730 BLMP54132 1417 aaPredicted RBP22.26■■□□□ 1.15
SNRNP70-202ENST00000401730 FRAT1Q92837 279 aaPredicted RBP22.26■■□□□ 1.15
SNRNP70-202ENST00000401730 SLC12A5Q9H2X9 1139 aa22.25■■□□□ 1.15
SNRNP70-202ENST00000401730 BCL2L13Q9BXK5 485 aa22.24■■□□□ 1.15
SNRNP70-202ENST00000401730 CANXP27824 592 aaKnown RBP22.24■■□□□ 1.15
SNRNP70-202ENST00000401730 ATP10AO60312 1499 aa22.23■■□□□ 1.15
SNRNP70-202ENST00000401730 IQGAP3Q86VI3 1631 aa22.23■■□□□ 1.15
SNRNP70-202ENST00000401730 MAST1Q9Y2H9 1570 aa22.23■■□□□ 1.15
SNRNP70-202ENST00000401730 KANK1Q14678 1352 aa22.23■■□□□ 1.15
SNRNP70-202ENST00000401730 SLFN5Q08AF3 891 aa22.22■■□□□ 1.15
SNRNP70-202ENST00000401730 SCAF11Q99590 1463 aaKnown RBP22.2■■□□□ 1.14
SNRNP70-202ENST00000401730 PANK1Q8TE04 598 aa22.2■■□□□ 1.14
SNRNP70-202ENST00000401730 CFAP65Q6ZU64 1925 aaKnown RBP22.19■■□□□ 1.14
SNRNP70-202ENST00000401730 MORC1Q86VD1 984 aa22.18■■□□□ 1.14
SNRNP70-202ENST00000401730 COG6Q9Y2V7 657 aa22.18■■□□□ 1.14
SNRNP70-202ENST00000401730 DAXXQ9UER7 740 aaPredicted RBP22.17■■□□□ 1.14
SNRNP70-202ENST00000401730 ZCCHC11Q5TAX3 1644 aaKnown RBP22.17■■□□□ 1.14
SNRNP70-202ENST00000401730 MS4A1P11836 297 aa22.17■■□□□ 1.14
SNRNP70-202ENST00000401730 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.17■■□□□ 1.14
SNRNP70-202ENST00000401730 CLUAP1Q96AJ1 413 aa22.16■■□□□ 1.14
SNRNP70-202ENST00000401730 ZMYM4Q5VZL5 1548 aa22.16■■□□□ 1.14
SNRNP70-202ENST00000401730 PLXNC1O60486 1568 aa22.16■■□□□ 1.14
SNRNP70-202ENST00000401730 STK26Q9P289 416 aa22.15■■□□□ 1.14
SNRNP70-202ENST00000401730 TNNQ9UQP3 1299 aa22.15■■□□□ 1.14
SNRNP70-202ENST00000401730 ABCC1P33527 1531 aa22.15■■□□□ 1.14
SNRNP70-202ENST00000401730 EIF2AK4Q9P2K8 1649 aaKnown RBP22.15■■□□□ 1.14
SNRNP70-202ENST00000401730 FANCAO15360 1455 aa22.14■■□□□ 1.14
SNRNP70-202ENST00000401730 ZNF521Q96K83 1311 aa22.13■■□□□ 1.13
SNRNP70-202ENST00000401730 EIF3AQ14152 1382 aaKnown RBP22.13■■□□□ 1.13
SNRNP70-202ENST00000401730 IGHDP01880 384 aa22.12■■□□□ 1.13
SNRNP70-202ENST00000401730 CENPQQ7L2Z9 268 aaPredicted RBP22.12■■□□□ 1.13
SNRNP70-202ENST00000401730 CLTCL1P53675 1640 aa22.12■■□□□ 1.13
SNRNP70-202ENST00000401730 ASXL1Q8IXJ9 1541 aa22.11■■□□□ 1.13
SNRNP70-202ENST00000401730 KDM2BQ8NHM5 1336 aa22.11■■□□□ 1.13
SNRNP70-202ENST00000401730 MADDQ8WXG6 1647 aa22.1■■□□□ 1.13
SNRNP70-202ENST00000401730 CENPJQ9HC77 1338 aaPredicted RBP22.1■■□□□ 1.13
SNRNP70-202ENST00000401730 ADGRL1O94910 1474 aa22.09■■□□□ 1.13
SNRNP70-202ENST00000401730 NOS1P29475 1434 aa22.09■■□□□ 1.13
SNRNP70-202ENST00000401730 MTHFSP49914 203 aa22.08■■□□□ 1.13
SNRNP70-202ENST00000401730 WWC1Q8IX03 1113 aa22.08■■□□□ 1.13
SNRNP70-202ENST00000401730 RAPGEF3O95398 923 aa22.08■■□□□ 1.12
SNRNP70-202ENST00000401730 CABP2Q9NPB3 220 aa22.07■■□□□ 1.12
SNRNP70-202ENST00000401730 E9PSI1 815 aa22.06■■□□□ 1.12
SNRNP70-202ENST00000401730 NPM1P06748 294 aaKnown RBP eCLIP22.06■■□□□ 1.12
SNRNP70-202ENST00000401730 TCP11L2Q8N4U5 519 aa22.06■■□□□ 1.12
SNRNP70-202ENST00000401730 SHROOM2Q13796 1616 aa22.06■■□□□ 1.12
SNRNP70-202ENST00000401730 ZFYVE16Q7Z3T8 1539 aa22.06■■□□□ 1.12
SNRNP70-202ENST00000401730 C8orf34Q49A92 452 aa22.05■■□□□ 1.12
SNRNP70-202ENST00000401730 FAM161AQ3B820 660 aa22.05■■□□□ 1.12
SNRNP70-202ENST00000401730 NSD3Q9BZ95 1437 aa22.05■■□□□ 1.12
SNRNP70-202ENST00000401730 PTPRTO14522 1441 aa22.04■■□□□ 1.12
SNRNP70-202ENST00000401730 U2AF1L5P0DN76 240 aaPredicted RBP22.04■■□□□ 1.12
SNRNP70-202ENST00000401730 U2AF1Q01081 240 aaKnown RBP eCLIP22.04■■□□□ 1.12
SNRNP70-202ENST00000401730 TRPM2O94759 1503 aa22.04■■□□□ 1.12
SNRNP70-202ENST00000401730 ERVK-7P63135 1459 aa22.04■■□□□ 1.12
SNRNP70-202ENST00000401730 U2SURPO15042 1029 aaKnown RBP22.02■■□□□ 1.12
SNRNP70-202ENST00000401730 ATP7AQ04656 1500 aa22.02■■□□□ 1.11
SNRNP70-202ENST00000401730 LAMC1P11047 1609 aa22.01■■□□□ 1.11
SNRNP70-202ENST00000401730 EIF5BO60841 1220 aaKnown RBP22■■□□□ 1.11
SNRNP70-202ENST00000401730 RNF17Q9BXT8 1623 aaKnown RBP22■■□□□ 1.11
SNRNP70-202ENST00000401730 SEC24BO95487 1268 aa22■■□□□ 1.11
SNRNP70-202ENST00000401730 RTEL1-TNFRSF6BF6WH68 1400 aa21.99■■□□□ 1.11
SNRNP70-202ENST00000401730 PIK3C2GO75747 1445 aa21.99■■□□□ 1.11
SNRNP70-202ENST00000401730 RLBP1P12271 317 aa21.99■■□□□ 1.11
SNRNP70-202ENST00000401730 TRMT2AQ8IZ69 625 aaKnown RBP21.99■■□□□ 1.11
SNRNP70-202ENST00000401730 DDRGK1Q96HY6 314 aa21.99■■□□□ 1.11
SNRNP70-202ENST00000401730 GGNBP2Q9H3C7 697 aa21.99■■□□□ 1.11
SNRNP70-202ENST00000401730 NKTRP30414 1462 aaKnown RBP21.99■■□□□ 1.11
SNRNP70-202ENST00000401730 TSR2Q969E8 191 aaKnown RBP21.98■■□□□ 1.11
SNRNP70-202ENST00000401730 ASXL2Q76L83 1435 aa21.98■■□□□ 1.11
SNRNP70-202ENST00000401730 SPHKAPQ2M3C7 1700 aa21.98■■□□□ 1.11
SNRNP70-202ENST00000401730 SRPK2P78362 688 aaKnown RBP21.97■■□□□ 1.11
SNRNP70-202ENST00000401730 FBLN1P23142 703 aa21.97■■□□□ 1.11
SNRNP70-202ENST00000401730 IQGAP1P46940 1657 aa21.97■■□□□ 1.11
SNRNP70-202ENST00000401730 NFKBIBQ15653 356 aa21.97■■□□□ 1.11
SNRNP70-202ENST00000401730 PPM1GO15355 546 aaPredicted RBP21.96■■□□□ 1.11
SNRNP70-202ENST00000401730 STAC3Q96MF2 364 aa21.96■■□□□ 1.11
SNRNP70-202ENST00000401730 BRPF3Q9ULD4 1205 aa21.96■■□□□ 1.11
SNRNP70-202ENST00000401730 SYNMO15061 1565 aa21.95■■□□□ 1.1
SNRNP70-202ENST00000401730 MINK1Q8N4C8 1332 aaPredicted RBP21.94■■□□□ 1.1
SNRNP70-202ENST00000401730 RUNDC1Q96C34 613 aa21.94■■□□□ 1.1
SNRNP70-202ENST00000401730 SPRYD3Q8NCJ5 442 aa21.93■■□□□ 1.1
SNRNP70-202ENST00000401730 C14orf93Q9H972 538 aaKnown RBP21.93■■□□□ 1.1
SNRNP70-202ENST00000401730 PCDHB15Q9Y5E8 787 aa21.93■■□□□ 1.1
SNRNP70-202ENST00000401730 INSRP06213 1382 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms