RNA–Protein interactions for RNA: ENST00000401447.1

RPA3-203, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-203ENST00000401447 LRCH3Q96II8 777 aa8.16□□□□□ -1.1
RPA3-203ENST00000401447 RCCD1A6NED2 376 aa8.15□□□□□ -1.1
RPA3-203ENST00000401447 RNF40O75150 1001 aa8.15□□□□□ -1.1
RPA3-203ENST00000401447 TPRNQ4KMQ1 711 aa8.15□□□□□ -1.1
RPA3-203ENST00000401447 NYAP1Q6ZVC0 841 aa8.15□□□□□ -1.1
RPA3-203ENST00000401447 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.15□□□□□ -1.1
RPA3-203ENST00000401447 SAMD7Q7Z3H4 446 aa8.14□□□□□ -1.11
RPA3-203ENST00000401447 TMEM134Q9H6X4 195 aa8.13□□□□□ -1.11
RPA3-203ENST00000401447 SWT1Q5T5J6 900 aaKnown RBP8.12□□□□□ -1.11
RPA3-203ENST00000401447 SLF2Q8IX21 1173 aa8.12□□□□□ -1.11
RPA3-203ENST00000401447 NECTIN2Q92692 538 aa8.12□□□□□ -1.11
RPA3-203ENST00000401447 AK7Q96M32 723 aa8.12□□□□□ -1.11
RPA3-203ENST00000401447 WBP1LQ9NX94 342 aa8.12□□□□□ -1.11
RPA3-203ENST00000401447 SLC24A3Q9HC58 644 aa8.1□□□□□ -1.11
RPA3-203ENST00000401447 TTLL12Q14166 644 aaPredicted RBP8.09□□□□□ -1.11
RPA3-203ENST00000401447 NLRP7Q8WX94 980 aa8.09□□□□□ -1.11
RPA3-203ENST00000401447 PHOX2BQ99453 314 aa8.09□□□□□ -1.11
RPA3-203ENST00000401447 TSR3Q9UJK0 312 aaKnown RBP8.09□□□□□ -1.11
RPA3-203ENST00000401447 HPS5Q9UPZ3 1129 aa8.09□□□□□ -1.11
RPA3-203ENST00000401447 CLCN1P35523 988 aa8.08□□□□□ -1.12
RPA3-203ENST00000401447 MDM2Q00987 491 aaPredicted RBP8.08□□□□□ -1.12
RPA3-203ENST00000401447 IRX2Q9BZI1 471 aaPredicted RBP8.08□□□□□ -1.12
RPA3-203ENST00000401447 DAXXQ9UER7 740 aaPredicted RBP8.08□□□□□ -1.12
RPA3-203ENST00000401447 PPP4CP60510 307 aa8.07□□□□□ -1.12
RPA3-203ENST00000401447 AMHR2Q16671 573 aa8.07□□□□□ -1.12
RPA3-203ENST00000401447 RSPH4AQ5TD94 716 aa8.07□□□□□ -1.12
RPA3-203ENST00000401447 SULF1Q8IWU6 871 aa8.07□□□□□ -1.12
RPA3-203ENST00000401447 GPCPD1Q9NPB8 672 aa8.07□□□□□ -1.12
RPA3-203ENST00000401447 TRIM66O15016 1216 aa8.06□□□□□ -1.12
RPA3-203ENST00000401447 KCNC4Q03721 635 aa8.05□□□□□ -1.12
RPA3-203ENST00000401447 RDH13Q8NBN7 331 aa8.05□□□□□ -1.12
RPA3-203ENST00000401447 DDX11L8A8MPP1 907 aa8.04□□□□□ -1.12
RPA3-203ENST00000401447 PRR14Q9BWN1 585 aa8.04□□□□□ -1.12
RPA3-203ENST00000401447 CFHP08603 1231 aa8.02□□□□□ -1.13
RPA3-203ENST00000401447 PDE4DQ08499 809 aa8.02□□□□□ -1.13
RPA3-203ENST00000401447 KMT5BQ4FZB7 885 aa8.02□□□□□ -1.13
RPA3-203ENST00000401447 GIGYF2Q6Y7W6 1299 aaKnown RBP8.01□□□□□ -1.13
RPA3-203ENST00000401447 PARP9Q8IXQ6 854 aa8.01□□□□□ -1.13
RPA3-203ENST00000401447 SLC10A3P09131 477 aa7.99□□□□□ -1.13
RPA3-203ENST00000401447 PRKCSHP14314 528 aaPredicted RBP7.99□□□□□ -1.13
RPA3-203ENST00000401447 TJAP1Q5JTD0 557 aa7.99□□□□□ -1.13
RPA3-203ENST00000401447 FAM217BQ9NTX9 383 aaPredicted RBP7.99□□□□□ -1.13
RPA3-203ENST00000401447 TMUB1Q9BVT8 246 aa7.98□□□□□ -1.13
RPA3-203ENST00000401447 CD46P15529 392 aa7.97□□□□□ -1.13
RPA3-203ENST00000401447 APLP1P51693 650 aa7.97□□□□□ -1.13
RPA3-203ENST00000401447 SSTR3P32745 418 aaPredicted RBP7.96□□□□□ -1.14
RPA3-203ENST00000401447 REPIN1Q9BWE0 567 aaKnown RBP7.96□□□□□ -1.14
RPA3-203ENST00000401447 PCDHB3Q9Y5E6 796 aa7.96□□□□□ -1.14
RPA3-203ENST00000401447 ACTN4O43707 911 aaKnown RBP7.95□□□□□ -1.14
RPA3-203ENST00000401447 GCGRP47871 477 aa7.95□□□□□ -1.14
RPA3-203ENST00000401447 NEUROD2Q15784 382 aa7.95□□□□□ -1.14
RPA3-203ENST00000401447 GRIPAP1Q4V328 841 aa7.93□□□□□ -1.14
RPA3-203ENST00000401447 NUTM1Q86Y26 1132 aa7.93□□□□□ -1.14
RPA3-203ENST00000401447 MTRQ99707 1265 aa7.93□□□□□ -1.14
RPA3-203ENST00000401447 KDM4CQ9H3R0 1056 aa7.93□□□□□ -1.14
RPA3-203ENST00000401447 GPBP1L1Q9HC44 474 aaPredicted RBP7.93□□□□□ -1.14
RPA3-203ENST00000401447 KDM4AO75164 1064 aa7.92□□□□□ -1.14
RPA3-203ENST00000401447 MS4A1P11836 297 aa7.92□□□□□ -1.14
RPA3-203ENST00000401447 USP46P62068 366 aa7.92□□□□□ -1.14
RPA3-203ENST00000401447 FUT2Q10981 343 aa7.92□□□□□ -1.14
RPA3-203ENST00000401447 BEGAINQ9BUH8 593 aa7.92□□□□□ -1.14
RPA3-203ENST00000401447 IL21Q9HBE4 155 aa7.92□□□□□ -1.14
RPA3-203ENST00000401447 COPS2P61201 443 aa7.91□□□□□ -1.14
RPA3-203ENST00000401447 ATP6V1AP38606 617 aa7.9□□□□□ -1.14
RPA3-203ENST00000401447 NR1I2O75469 434 aa7.89□□□□□ -1.15
RPA3-203ENST00000401447 BRPF1P55201 1214 aaPredicted RBP7.89□□□□□ -1.15
RPA3-203ENST00000401447 DIXDC1Q155Q3 683 aa7.89□□□□□ -1.15
RPA3-203ENST00000401447 PPP1R18Q6NYC8 613 aa7.89□□□□□ -1.15
RPA3-203ENST00000401447 BLOC1S3Q6QNY0 202 aa7.89□□□□□ -1.15
RPA3-203ENST00000401447 Q6ZNB5 142 aa7.89□□□□□ -1.15
RPA3-203ENST00000401447 ZNF516Q92618 1163 aa7.89□□□□□ -1.15
RPA3-203ENST00000401447 DDRGK1Q96HY6 314 aa7.89□□□□□ -1.15
RPA3-203ENST00000401447 LCE2BO14633 110 aa7.88□□□□□ -1.15
RPA3-203ENST00000401447 LAPTM4AQ15012 233 aa7.88□□□□□ -1.15
RPA3-203ENST00000401447 PUS10Q3MIT2 529 aaKnown RBP7.88□□□□□ -1.15
RPA3-203ENST00000401447 HOXA2O43364 376 aa7.87□□□□□ -1.15
RPA3-203ENST00000401447 MORN1Q5T089 497 aa7.86□□□□□ -1.15
RPA3-203ENST00000401447 TBC1D2Q9BYX2 928 aa7.86□□□□□ -1.15
RPA3-203ENST00000401447 PRKD2Q9BZL6 878 aa7.86□□□□□ -1.15
RPA3-203ENST00000401447 ZPR1O75312 459 aa7.85□□□□□ -1.15
RPA3-203ENST00000401447 NKX2-3Q8TAU0 364 aa7.85□□□□□ -1.15
RPA3-203ENST00000401447 SPIRE2Q8WWL2 714 aa7.85□□□□□ -1.15
RPA3-203ENST00000401447 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.85□□□□□ -1.15
RPA3-203ENST00000401447 V9GY48 417 aaPredicted RBP7.85□□□□□ -1.15
RPA3-203ENST00000401447 GFRA3O60609 400 aa7.84□□□□□ -1.15
RPA3-203ENST00000401447 Q3C1V9 767 aa7.84□□□□□ -1.15
RPA3-203ENST00000401447 RSPH6AQ9H0K4 717 aa7.84□□□□□ -1.15
RPA3-203ENST00000401447 SCUBE3Q8IX30 993 aa7.83□□□□□ -1.16
RPA3-203ENST00000401447 FAM117AQ9C073 453 aa7.83□□□□□ -1.16
RPA3-203ENST00000401447 SLC27A5Q9Y2P5 690 aa7.83□□□□□ -1.16
RPA3-203ENST00000401447 TLL1O43897 1013 aa7.82□□□□□ -1.16
RPA3-203ENST00000401447 FDX1P10109 184 aa7.82□□□□□ -1.16
RPA3-203ENST00000401447 MOXD2PA6NHM9 499 aa7.81□□□□□ -1.16
RPA3-203ENST00000401447 FMNL1O95466 1100 aaPredicted RBP7.81□□□□□ -1.16
RPA3-203ENST00000401447 HLA-CQ95604 372 aa7.81□□□□□ -1.16
RPA3-203ENST00000401447 NRG2O14511 850 aaPredicted RBP7.8□□□□□ -1.16
RPA3-203ENST00000401447 ADH1BP00325 375 aa7.8□□□□□ -1.16
RPA3-203ENST00000401447 NDUFV2P19404 249 aa7.8□□□□□ -1.16
RPA3-203ENST00000401447 GUCA2AQ02747 115 aa7.8□□□□□ -1.16
RPA3-203ENST00000401447 MYSM1Q5VVJ2 828 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms