RNA–Protein interactions for RNA: ENST00000401000.8

RPRD2-203, Transcript of regulation of nuclear pre-mRNA domain containing 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RPRD2, Length 7,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2-203ENST00000401000 AK7Q96M32 723 aa12.19□□□□□ -0.46
RPRD2-203ENST00000401000 TRAK1Q9UPV9 953 aa12.18□□□□□ -0.46
RPRD2-203ENST00000401000 BAZ1AQ9NRL2 1556 aaPredicted RBP12.18□□□□□ -0.46
RPRD2-203ENST00000401000 HNRNPMP52272 730 aaKnown RBP eCLIP12.18□□□□□ -0.463e-7■■■■□ 26.3
RPRD2-203ENST00000401000 HOOK1Q9UJC3 728 aaKnown RBP12.18□□□□□ -0.46
RPRD2-203ENST00000401000 RUFY2Q8WXA3 655 aa12.18□□□□□ -0.46
RPRD2-203ENST00000401000 CHMP5Q9NZZ3 219 aa12.18□□□□□ -0.46
RPRD2-203ENST00000401000 REC8O95072 547 aa12.18□□□□□ -0.46
RPRD2-203ENST00000401000 NOM1Q5C9Z4 860 aaKnown RBP12.18□□□□□ -0.46
RPRD2-203ENST00000401000 NAP1L1P55209 391 aaKnown RBP12.17□□□□□ -0.46
RPRD2-203ENST00000401000 ZBED9Q6R2W3 1325 aa12.17□□□□□ -0.46
RPRD2-203ENST00000401000 NECTIN2Q92692 538 aa12.17□□□□□ -0.46
RPRD2-203ENST00000401000 APPP05067 770 aa12.17□□□□□ -0.46
RPRD2-203ENST00000401000 CCDC47Q96A33 483 aaKnown RBP12.17□□□□□ -0.46
RPRD2-203ENST00000401000 R3HCC1Q9Y3T6 440 aaKnown RBP12.16□□□□□ -0.46
RPRD2-203ENST00000401000 VPS37CA5D8V6 355 aaPredicted RBP12.16□□□□□ -0.46
RPRD2-203ENST00000401000 NACADO15069 1562 aa12.16□□□□□ -0.46
RPRD2-203ENST00000401000 ZKSCAN1P17029 563 aaPredicted RBP12.16□□□□□ -0.46
RPRD2-203ENST00000401000 C1orf141Q5JVX7 400 aa12.16□□□□□ -0.46
RPRD2-203ENST00000401000 KIF3BO15066 747 aa12.16□□□□□ -0.46
RPRD2-203ENST00000401000 MNS1Q8NEH6 495 aa12.16□□□□□ -0.46
RPRD2-203ENST00000401000 EIF2S2P20042 333 aaKnown RBP12.15□□□□□ -0.46
RPRD2-203ENST00000401000 CPLX1O14810 134 aa12.15□□□□□ -0.46
RPRD2-203ENST00000401000 ARGLU1Q9NWB6 273 aaPredicted RBP12.15□□□□□ -0.46
RPRD2-203ENST00000401000 C9orf78Q9NZ63 289 aaPredicted RBP12.15□□□□□ -0.46
RPRD2-203ENST00000401000 IFIT2P09913 472 aaKnown RBP12.15□□□□□ -0.46
RPRD2-203ENST00000401000 ST20-MTHFSA0A0A6YYL1 179 aa12.15□□□□□ -0.46
RPRD2-203ENST00000401000 CPLX2Q6PUV4 134 aaKnown RBP12.15□□□□□ -0.46
RPRD2-203ENST00000401000 NFXL1Q6ZNB6 911 aa12.15□□□□□ -0.46
RPRD2-203ENST00000401000 SMC3Q9UQE7 1217 aa12.15□□□□□ -0.46
RPRD2-203ENST00000401000 CARMIL2Q6F5E8 1435 aa12.15□□□□□ -0.47
RPRD2-203ENST00000401000 LRRFIP1Q32MZ4 808 aaKnown RBP12.14□□□□□ -0.47
RPRD2-203ENST00000401000 AMOTL1Q8IY63 956 aa12.14□□□□□ -0.47
RPRD2-203ENST00000401000 TRIM34Q9BYJ4 488 aa12.14□□□□□ -0.47
RPRD2-203ENST00000401000 CGNL1Q0VF96 1302 aa12.14□□□□□ -0.47
RPRD2-203ENST00000401000 DDX19BQ9UMR2 479 aa12.14□□□□□ -0.47
RPRD2-203ENST00000401000 NOL10Q9BSC4 688 aaKnown RBP12.13□□□□□ -0.47
RPRD2-203ENST00000401000 ACBD3Q9H3P7 528 aa12.13□□□□□ -0.47
RPRD2-203ENST00000401000 CCDC39Q9UFE4 941 aa12.13□□□□□ -0.47
RPRD2-203ENST00000401000 MAP7D2Q96T17 732 aa12.13□□□□□ -0.47
RPRD2-203ENST00000401000 EID1Q9Y6B2 187 aa12.13□□□□□ -0.47
RPRD2-203ENST00000401000 INTS3Q68E01 1043 aaKnown RBP12.12□□□□□ -0.47
RPRD2-203ENST00000401000 PDILTQ8N807 584 aa12.12□□□□□ -0.47
RPRD2-203ENST00000401000 DHX16O60231 1041 aaKnown RBP12.12□□□□□ -0.47
RPRD2-203ENST00000401000 NASPP49321 788 aaPredicted RBP12.12□□□□□ -0.47
RPRD2-203ENST00000401000 NUCB2P80303 420 aa12.12□□□□□ -0.47
RPRD2-203ENST00000401000 COG3Q96JB2 828 aa12.12□□□□□ -0.47
RPRD2-203ENST00000401000 RNF20Q5VTR2 975 aa12.12□□□□□ -0.47
RPRD2-203ENST00000401000 NFKBIBQ15653 356 aa12.11□□□□□ -0.47
RPRD2-203ENST00000401000 CTDP1Q9Y5B0 961 aaPredicted RBP12.11□□□□□ -0.47
RPRD2-203ENST00000401000 APAF1O14727 1248 aa12.11□□□□□ -0.47
RPRD2-203ENST00000401000 NEXNQ0ZGT2 675 aa12.11□□□□□ -0.47
RPRD2-203ENST00000401000 DZIP1LQ8IYY4 767 aaKnown RBP12.11□□□□□ -0.47
RPRD2-203ENST00000401000 TRDNQ13061 729 aa12.11□□□□□ -0.47
RPRD2-203ENST00000401000 TTLL5Q6EMB2 1281 aa12.11□□□□□ -0.47
RPRD2-203ENST00000401000 WASHC2CQ9Y4E1 1318 aa12.11□□□□□ -0.47
RPRD2-203ENST00000401000 CDR1P51861 262 aa12.11□□□□□ -0.47
RPRD2-203ENST00000401000 HSP90B2PQ58FF3 399 aa12.11□□□□□ -0.47
RPRD2-203ENST00000401000 C22orf23Q9BZE7 217 aa12.11□□□□□ -0.47
RPRD2-203ENST00000401000 EFCAB2Q5VUJ9 269 aa12.1□□□□□ -0.47
RPRD2-203ENST00000401000 CAGE1Q8TC20 777 aa12.1□□□□□ -0.47
RPRD2-203ENST00000401000 PRKRIP1Q9H875 184 aaPredicted RBP12.1□□□□□ -0.47
RPRD2-203ENST00000401000 ERICH2A1L162 156 aa12.1□□□□□ -0.47
RPRD2-203ENST00000401000 SKIDA1Q1XH10 827 aa12.1□□□□□ -0.47
RPRD2-203ENST00000401000 ROCK1Q13464 1354 aa12.1□□□□□ -0.47
RPRD2-203ENST00000401000 CCDC88BA6NC98 1476 aa12.1□□□□□ -0.47
RPRD2-203ENST00000401000 CCDC144AA2RUR9 1427 aa12.09□□□□□ -0.47
RPRD2-203ENST00000401000 OLFM4Q6UX06 510 aa12.09□□□□□ -0.47
RPRD2-203ENST00000401000 CCDC73Q6ZRK6 1079 aa12.09□□□□□ -0.47
RPRD2-203ENST00000401000 USP47Q96K76 1375 aa12.09□□□□□ -0.47
RPRD2-203ENST00000401000 KDM4AO75164 1064 aa12.09□□□□□ -0.47
RPRD2-203ENST00000401000 VPS37DQ86XT2 251 aa12.09□□□□□ -0.47
RPRD2-203ENST00000401000 TEFQ10587 303 aa12.09□□□□□ -0.47
RPRD2-203ENST00000401000 CCDC18Q5T9S5 1454 aa12.09□□□□□ -0.47
RPRD2-203ENST00000401000 CT47A1Q5JQC4 288 aaPredicted RBP12.08□□□□□ -0.47
RPRD2-203ENST00000401000 LNPKQ9C0E8 428 aa12.08□□□□□ -0.47
RPRD2-203ENST00000401000 RIPK4P57078 832 aa12.08□□□□□ -0.48
RPRD2-203ENST00000401000 TTC5Q8N0Z6 440 aa12.08□□□□□ -0.48
RPRD2-203ENST00000401000 CWC15Q9P013 229 aaKnown RBP12.08□□□□□ -0.48
RPRD2-203ENST00000401000 EPS15P42566 896 aa12.08□□□□□ -0.48
RPRD2-203ENST00000401000 RNF214Q8ND24 703 aa12.08□□□□□ -0.48
RPRD2-203ENST00000401000 NAT10Q9H0A0 1025 aaKnown RBP12.08□□□□□ -0.48
RPRD2-203ENST00000401000 G3BP1Q13283 466 aaKnown RBP eCLIP12.08□□□□□ -0.48
RPRD2-203ENST00000401000 EVA1CP58658 441 aa12.08□□□□□ -0.48
RPRD2-203ENST00000401000 CCDC27Q2M243 656 aa12.07□□□□□ -0.48
RPRD2-203ENST00000401000 HSP90AB2PQ58FF8 381 aa12.07□□□□□ -0.48
RPRD2-203ENST00000401000 ODF2Q5BJF6 829 aa12.07□□□□□ -0.48
RPRD2-203ENST00000401000 EVC2Q86UK5 1308 aa12.07□□□□□ -0.48
RPRD2-203ENST00000401000 H0YHG0 523 aa12.07□□□□□ -0.48
RPRD2-203ENST00000401000 MRE11P49959 708 aa12.07□□□□□ -0.48
RPRD2-203ENST00000401000 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.07□□□□□ -0.48
RPRD2-203ENST00000401000 FHOD3Q2V2M9 1422 aa12.06□□□□□ -0.48
RPRD2-203ENST00000401000 RBM10P98175 930 aaKnown RBP12.06□□□□□ -0.48
RPRD2-203ENST00000401000 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.06□□□□□ -0.48
RPRD2-203ENST00000401000 SAFBQ15424 915 aaKnown RBP eCLIP12.06□□□□□ -0.48
RPRD2-203ENST00000401000 CCDC43Q96MW1 224 aaKnown RBP12.06□□□□□ -0.48
RPRD2-203ENST00000401000 CECR2Q9BXF3 1484 aa12.06□□□□□ -0.48
RPRD2-203ENST00000401000 RDXP35241 583 aaKnown RBP12.06□□□□□ -0.48
RPRD2-203ENST00000401000 CAVIN1Q6NZI2 390 aaKnown RBP12.05□□□□□ -0.48
RPRD2-203ENST00000401000 UACAQ9BZF9 1416 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms