RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 SENP3Q9H4L4 574 aaPredicted RBP23.9■■□□□ 1.42
ATG4B-203ENST00000400772 PLEKHG1Q9ULL1 1385 aa23.9■■□□□ 1.42
ATG4B-203ENST00000400772 ALKQ9UM73 1620 aa23.89■■□□□ 1.42
ATG4B-203ENST00000400772 KCNA6P17658 529 aa23.89■■□□□ 1.41
ATG4B-203ENST00000400772 NUTM2DQ5VT03 806 aaPredicted RBP23.89■■□□□ 1.41
ATG4B-203ENST00000400772 TRIM52Q96A61 297 aa23.89■■□□□ 1.41
ATG4B-203ENST00000400772 BCANQ96GW7 911 aa23.88■■□□□ 1.41
ATG4B-203ENST00000400772 SPHKAPQ2M3C7 1700 aa23.87■■□□□ 1.41
ATG4B-203ENST00000400772 PPP1R15AO75807 674 aaPredicted RBP23.87■■□□□ 1.41
ATG4B-203ENST00000400772 PIP4K2BP78356 416 aa23.87■■□□□ 1.41
ATG4B-203ENST00000400772 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.87■■□□□ 1.41
ATG4B-203ENST00000400772 SCAF1Q9H7N4 1312 aaKnown RBP23.84■■□□□ 1.41
ATG4B-203ENST00000400772 XIRP1Q702N8 1843 aaKnown RBP23.82■■□□□ 1.4
ATG4B-203ENST00000400772 SLC4A1APQ9BWU0 796 aaKnown RBP23.82■■□□□ 1.4
ATG4B-203ENST00000400772 TBX22Q9Y458 520 aa23.82■■□□□ 1.4
ATG4B-203ENST00000400772 TRPM2O94759 1503 aa23.81■■□□□ 1.4
ATG4B-203ENST00000400772 ADAMTS13Q76LX8 1427 aa23.81■■□□□ 1.4
ATG4B-203ENST00000400772 TMEM94Q12767 1356 aa23.8■■□□□ 1.4
ATG4B-203ENST00000400772 HSPA1LP34931 641 aa23.8■■□□□ 1.4
ATG4B-203ENST00000400772 CLTCL1P53675 1640 aa23.8■■□□□ 1.4
ATG4B-203ENST00000400772 NWD1Q149M9 1564 aa23.79■■□□□ 1.4
ATG4B-203ENST00000400772 PROSER2Q86WR7 435 aaPredicted RBP23.79■■□□□ 1.4
ATG4B-203ENST00000400772 RBM33Q96EV2 1170 aaKnown RBP23.79■■□□□ 1.4
ATG4B-203ENST00000400772 ZNF326Q5BKZ1 582 aaKnown RBP23.76■■□□□ 1.39
ATG4B-203ENST00000400772 NKTRP30414 1462 aaKnown RBP23.75■■□□□ 1.39
ATG4B-203ENST00000400772 CHD2O14647 1828 aaKnown RBP23.75■■□□□ 1.39
ATG4B-203ENST00000400772 FOXD1Q16676 465 aa23.75■■□□□ 1.39
ATG4B-203ENST00000400772 DIP2AQ14689 1571 aa23.71■■□□□ 1.39
ATG4B-203ENST00000400772 MPHOSPH9Q99550 1183 aa23.71■■□□□ 1.39
ATG4B-203ENST00000400772 PIK3R4Q99570 1358 aa23.7■■□□□ 1.38
ATG4B-203ENST00000400772 NRXN3Q9Y4C0 1643 aa23.7■■□□□ 1.38
ATG4B-203ENST00000400772 NEXMIFQ5QGS0 1516 aa23.69■■□□□ 1.38
ATG4B-203ENST00000400772 SETD5Q9C0A6 1442 aa23.69■■□□□ 1.38
ATG4B-203ENST00000400772 PTPRUQ92729 1446 aa23.68■■□□□ 1.38
ATG4B-203ENST00000400772 KIF1BO60333 1816 aa23.68■■□□□ 1.38
ATG4B-203ENST00000400772 DISP3Q9P2K9 1392 aa23.68■■□□□ 1.38
ATG4B-203ENST00000400772 SETBP1Q9Y6X0 1596 aa23.68■■□□□ 1.38
ATG4B-203ENST00000400772 AMOTL2Q9Y2J4 779 aa23.66■■□□□ 1.38
ATG4B-203ENST00000400772 METP08581 1390 aa23.64■■□□□ 1.37
ATG4B-203ENST00000400772 FAM135BQ49AJ0 1406 aa23.63■■□□□ 1.37
ATG4B-203ENST00000400772 MSH6P52701 1360 aa23.63■■□□□ 1.37
ATG4B-203ENST00000400772 RPGRIP1LQ68CZ1 1315 aa23.62■■□□□ 1.37
ATG4B-203ENST00000400772 NCOA3Q9Y6Q9 1424 aa23.62■■□□□ 1.37
ATG4B-203ENST00000400772 RAB3GAP2Q9H2M9 1393 aa23.61■■□□□ 1.37
ATG4B-203ENST00000400772 ACIN1Q9UKV3 1341 aaKnown RBP23.6■■□□□ 1.37
ATG4B-203ENST00000400772 VGFO15240 615 aaPredicted RBP23.6■■□□□ 1.37
ATG4B-203ENST00000400772 CCDC144AA2RUR9 1427 aa23.59■■□□□ 1.37
ATG4B-203ENST00000400772 SLAIN2Q9P270 581 aa23.58■■□□□ 1.37
ATG4B-203ENST00000400772 ILDR2Q71H61 639 aa23.57■■□□□ 1.36
ATG4B-203ENST00000400772 XRN1Q8IZH2 1706 aaKnown RBP23.56■■□□□ 1.36
ATG4B-203ENST00000400772 C19orf44Q9H6X5 657 aa23.56■■□□□ 1.36
ATG4B-203ENST00000400772 SPATA31E1Q6ZUB1 1445 aa23.56■■□□□ 1.36
ATG4B-203ENST00000400772 RGL3Q3MIN7 710 aa23.54■■□□□ 1.36
ATG4B-203ENST00000400772 C14orf37Q86TY3 774 aa23.54■■□□□ 1.36
ATG4B-203ENST00000400772 PPLO60437 1756 aa23.54■■□□□ 1.36
ATG4B-203ENST00000400772 ROBO1Q9Y6N7 1651 aa23.54■■□□□ 1.36
ATG4B-203ENST00000400772 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.51■■□□□ 1.35
ATG4B-203ENST00000400772 ADGRF5Q8IZF2 1346 aa23.51■■□□□ 1.35
ATG4B-203ENST00000400772 SETD1AO15047 1707 aaKnown RBP23.5■■□□□ 1.35
ATG4B-203ENST00000400772 MED1Q15648 1581 aaPredicted RBP23.5■■□□□ 1.35
ATG4B-203ENST00000400772 CADPS2Q86UW7 1296 aa23.5■■□□□ 1.35
ATG4B-203ENST00000400772 ATF3P18847 181 aa23.49■■□□□ 1.35
ATG4B-203ENST00000400772 HRCP23327 699 aa23.49■■□□□ 1.35
ATG4B-203ENST00000400772 ANKRD30BQ9BXX2 1392 aa23.45■■□□□ 1.34
ATG4B-203ENST00000400772 ROBO2Q9HCK4 1378 aa23.44■■□□□ 1.34
ATG4B-203ENST00000400772 DCCP43146 1447 aa23.43■■□□□ 1.34
ATG4B-203ENST00000400772 IFT172Q9UG01 1749 aa23.43■■□□□ 1.34
ATG4B-203ENST00000400772 PTCH1Q13635 1447 aa23.42■■□□□ 1.34
ATG4B-203ENST00000400772 PRAG1Q86YV5 1406 aa23.42■■□□□ 1.34
ATG4B-203ENST00000400772 ADGRL3Q9HAR2 1447 aa23.41■■□□□ 1.34
ATG4B-203ENST00000400772 BRINP3Q76B58 766 aa23.39■■□□□ 1.33
ATG4B-203ENST00000400772 MST1RQ04912 1400 aa23.39■■□□□ 1.33
ATG4B-203ENST00000400772 PIK3C2GO75747 1445 aa23.38■■□□□ 1.33
ATG4B-203ENST00000400772 PHLPP1O60346 1717 aa23.38■■□□□ 1.33
ATG4B-203ENST00000400772 NALCNQ8IZF0 1738 aa23.36■■□□□ 1.33
ATG4B-203ENST00000400772 TMEM132EQ6IEE7 984 aa23.35■■□□□ 1.33
ATG4B-203ENST00000400772 COL16A1Q07092 1604 aaPredicted RBP23.34■■□□□ 1.33
ATG4B-203ENST00000400772 PHF23Q9BUL5 403 aaPredicted RBP23.34■■□□□ 1.33
ATG4B-203ENST00000400772 NRXN1Q9ULB1 1477 aa23.34■■□□□ 1.33
ATG4B-203ENST00000400772 ASXL1Q8IXJ9 1541 aa23.33■■□□□ 1.33
ATG4B-203ENST00000400772 AHDC1Q5TGY3 1603 aaPredicted RBP23.33■■□□□ 1.33
ATG4B-203ENST00000400772 C14orf93Q9H972 538 aaKnown RBP23.33■■□□□ 1.33
ATG4B-203ENST00000400772 LRPPRCP42704 1394 aaKnown RBP23.32■■□□□ 1.32
ATG4B-203ENST00000400772 JCADQ9P266 1359 aa23.32■■□□□ 1.32
ATG4B-203ENST00000400772 STK26Q9P289 416 aa23.32■■□□□ 1.32
ATG4B-203ENST00000400772 RGS17Q9UGC6 210 aaPredicted RBP23.32■■□□□ 1.32
ATG4B-203ENST00000400772 MYOM2P54296 1465 aa23.31■■□□□ 1.32
ATG4B-203ENST00000400772 ABCC11Q96J66 1382 aa23.31■■□□□ 1.32
ATG4B-203ENST00000400772 TECPR2O15040 1411 aa23.31■■□□□ 1.32
ATG4B-203ENST00000400772 SOCS7O14512 581 aa23.3■■□□□ 1.32
ATG4B-203ENST00000400772 CFAP70Q5T0N1 1121 aa23.3■■□□□ 1.32
ATG4B-203ENST00000400772 WAPLQ7Z5K2 1190 aa23.29■■□□□ 1.32
ATG4B-203ENST00000400772 C1orf167Q5SNV9 1468 aa23.29■■□□□ 1.32
ATG4B-203ENST00000400772 YTHDC2Q9H6S0 1430 aaKnown RBP23.27■■□□□ 1.32
ATG4B-203ENST00000400772 PLEKHH1Q9ULM0 1364 aa23.27■■□□□ 1.31
ATG4B-203ENST00000400772 DDX17Q92841 729 aaKnown RBP23.26■■□□□ 1.31
ATG4B-203ENST00000400772 ORAI2Q96SN7 254 aa23.24■■□□□ 1.31
ATG4B-203ENST00000400772 DCAF11Q8TEB1 546 aa23.23■■□□□ 1.31
ATG4B-203ENST00000400772 SIRT1Q96EB6 747 aa23.23■■□□□ 1.31
ATG4B-203ENST00000400772 NHSL1Q5SYE7 1610 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms