RNA–Protein interactions for RNA: ENST00000399240.5

RUNX1-205, Transcript of runt related transcription factor 1, humanhuman

TSL 3 BASIC

Gene RUNX1, Length 1,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-205ENST00000399240 ARHGAP23Q9P227 1491 aa35.27■■■■□ 3.24
RUNX1-205ENST00000399240 RIMS2Q9UQ26 1411 aa35.26■■■■□ 3.23
RUNX1-205ENST00000399240 DCAF11Q8TEB1 546 aa35.25■■■■□ 3.23
RUNX1-205ENST00000399240 RPGRIP1LQ68CZ1 1315 aa35.25■■■■□ 3.23
RUNX1-205ENST00000399240 TIMELESSQ9UNS1 1208 aa35.24■■■■□ 3.23
RUNX1-205ENST00000399240 NUTM2DQ5VT03 806 aaPredicted RBP35.23■■■■□ 3.23
RUNX1-205ENST00000399240 KDM2AQ9Y2K7 1162 aa35.21■■■■□ 3.23
RUNX1-205ENST00000399240 MYOM2P54296 1465 aa35.18■■■■□ 3.22
RUNX1-205ENST00000399240 HSPA2P54652 639 aa35.18■■■■□ 3.22
RUNX1-205ENST00000399240 LTKP29376 864 aa35.17■■■■□ 3.22
RUNX1-205ENST00000399240 ADGRF5Q8IZF2 1346 aa35.15■■■■□ 3.22
RUNX1-205ENST00000399240 POLR1AO95602 1720 aaPredicted RBP35.14■■■■□ 3.22
RUNX1-205ENST00000399240 TXNDC2Q86VQ3 553 aa35.13■■■■□ 3.21
RUNX1-205ENST00000399240 NRXN1Q9ULB1 1477 aa35.13■■■■□ 3.21
RUNX1-205ENST00000399240 SCAF11Q99590 1463 aaKnown RBP35.12■■■■□ 3.21
RUNX1-205ENST00000399240 VGFO15240 615 aaPredicted RBP35.12■■■■□ 3.21
RUNX1-205ENST00000399240 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.12■■■■□ 3.21
RUNX1-205ENST00000399240 PPP1R15AO75807 674 aaPredicted RBP35.1■■■■□ 3.21
RUNX1-205ENST00000399240 HDGFP51858 240 aaKnown RBP35.1■■■■□ 3.21
RUNX1-205ENST00000399240 EID1Q9Y6B2 187 aa35.1■■■■□ 3.21
RUNX1-205ENST00000399240 STAC3Q96MF2 364 aa35.09■■■■□ 3.21
RUNX1-205ENST00000399240 PRAG1Q86YV5 1406 aa35.09■■■■□ 3.21
RUNX1-205ENST00000399240 AEBP2Q6ZN18 517 aaPredicted RBP35.08■■■■□ 3.21
RUNX1-205ENST00000399240 ANKLE2Q86XL3 938 aa35.08■■■■□ 3.21
RUNX1-205ENST00000399240 SENP3Q9H4L4 574 aaPredicted RBP35.08■■■■□ 3.21
RUNX1-205ENST00000399240 PIK3C2GO75747 1445 aa35.06■■■■□ 3.2
RUNX1-205ENST00000399240 NBPF8Q3BBV2 869 aa35.06■■■■□ 3.2
RUNX1-205ENST00000399240 NRXN3Q9Y4C0 1643 aa35.05■■■■□ 3.2
RUNX1-205ENST00000399240 STRCQ7RTU9 1775 aa35.05■■■■□ 3.2
RUNX1-205ENST00000399240 IQGAP1P46940 1657 aa35.05■■■■□ 3.2
RUNX1-205ENST00000399240 NCKAP5LQ9HCH0 1330 aa35.03■■■■□ 3.2
RUNX1-205ENST00000399240 PLEKHG1Q9ULL1 1385 aa35.03■■■■□ 3.2
RUNX1-205ENST00000399240 ZEB1P37275 1124 aaPredicted RBP35.02■■■■□ 3.2
RUNX1-205ENST00000399240 SETBP1Q9Y6X0 1596 aa35.01■■■■□ 3.2
RUNX1-205ENST00000399240 TRPM1Q7Z4N2 1603 aa35■■■■□ 3.19
RUNX1-205ENST00000399240 MED14O60244 1454 aa34.99■■■■□ 3.19
RUNX1-205ENST00000399240 SETD1AO15047 1707 aaKnown RBP34.97■■■■□ 3.19
RUNX1-205ENST00000399240 KIAA1210Q9ULL0 1709 aa34.96■■■■□ 3.19
RUNX1-205ENST00000399240 ALKQ9UM73 1620 aa34.95■■■■□ 3.19
RUNX1-205ENST00000399240 NPHP4O75161 1426 aaPredicted RBP34.94■■■■□ 3.18
RUNX1-205ENST00000399240 ADAMTS13Q76LX8 1427 aa34.94■■■■□ 3.18
RUNX1-205ENST00000399240 LAMC1P11047 1609 aa34.93■■■■□ 3.18
RUNX1-205ENST00000399240 CFAP70Q5T0N1 1121 aa34.93■■■■□ 3.18
RUNX1-205ENST00000399240 BCANQ96GW7 911 aa34.93■■■■□ 3.18
RUNX1-205ENST00000399240 C14orf93Q9H972 538 aaKnown RBP34.91■■■■□ 3.18
RUNX1-205ENST00000399240 RALGAPBQ86X10 1494 aa34.88■■■■□ 3.17
RUNX1-205ENST00000399240 SLC26A8Q96RN1 970 aa34.88■■■■□ 3.17
RUNX1-205ENST00000399240 ASXL1Q8IXJ9 1541 aa34.87■■■■□ 3.17
RUNX1-205ENST00000399240 NBPF1Q3BBV0 1214 aa34.87■■■■□ 3.17
RUNX1-205ENST00000399240 DIP2AQ14689 1571 aa34.86■■■■□ 3.17
RUNX1-205ENST00000399240 ADGRB1O14514 1584 aa34.84■■■■□ 3.17
RUNX1-205ENST00000399240 TMEM132EQ6IEE7 984 aa34.81■■■■□ 3.16
RUNX1-205ENST00000399240 ROCK2O75116 1388 aaKnown RBP34.81■■■■□ 3.16
RUNX1-205ENST00000399240 METP08581 1390 aa34.81■■■■□ 3.16
RUNX1-205ENST00000399240 TBX22Q9Y458 520 aa34.8■■■■□ 3.16
RUNX1-205ENST00000399240 GPRASP1Q5JY77 1395 aa34.77■■■■□ 3.16
RUNX1-205ENST00000399240 CHD2O14647 1828 aaKnown RBP34.73■■■■□ 3.15
RUNX1-205ENST00000399240 PTPRUQ92729 1446 aa34.71■■■■□ 3.15
RUNX1-205ENST00000399240 CARD11Q9BXL7 1154 aa34.7■■■■□ 3.15
RUNX1-205ENST00000399240 YTHDC2Q9H6S0 1430 aaKnown RBP34.69■■■■□ 3.14
RUNX1-205ENST00000399240 PIK3R4Q99570 1358 aa34.67■■■■□ 3.14
RUNX1-205ENST00000399240 DMRT2Q9Y5R5 561 aa34.67■■■■□ 3.14
RUNX1-205ENST00000399240 XRN1Q8IZH2 1706 aaKnown RBP34.66■■■■□ 3.14
RUNX1-205ENST00000399240 KNDC1Q76NI1 1749 aa34.66■■■■□ 3.14
RUNX1-205ENST00000399240 LRPPRCP42704 1394 aaKnown RBP34.65■■■■□ 3.14
RUNX1-205ENST00000399240 STK26Q9P289 416 aa34.65■■■■□ 3.14
RUNX1-205ENST00000399240 STRCP1A6NGW2 1772 aa34.64■■■■□ 3.14
RUNX1-205ENST00000399240 ARHGEF28Q8N1W1 1705 aaKnown RBP34.64■■■■□ 3.14
RUNX1-205ENST00000399240 TRAK1Q9UPV9 953 aa34.62■■■■□ 3.13
RUNX1-205ENST00000399240 NWD1Q149M9 1564 aa34.61■■■■□ 3.13
RUNX1-205ENST00000399240 AMOTL2Q9Y2J4 779 aa34.61■■■■□ 3.13
RUNX1-205ENST00000399240 ABCC11Q96J66 1382 aa34.6■■■■□ 3.13
RUNX1-205ENST00000399240 TECPR2O15040 1411 aa34.59■■■■□ 3.13
RUNX1-205ENST00000399240 CPS1P31327 1500 aa34.58■■■■□ 3.13
RUNX1-205ENST00000399240 USP47Q96K76 1375 aa34.57■■■■□ 3.13
RUNX1-205ENST00000399240 KCNA6P17658 529 aa34.56■■■■□ 3.12
RUNX1-205ENST00000399240 DLC1Q96QB1 1528 aa34.56■■■■□ 3.12
RUNX1-205ENST00000399240 ROBO2Q9HCK4 1378 aa34.54■■■■□ 3.12
RUNX1-205ENST00000399240 ZNF335Q9H4Z2 1342 aaPredicted RBP34.52■■■■□ 3.12
RUNX1-205ENST00000399240 PTCH1Q13635 1447 aa34.51■■■■□ 3.12
RUNX1-205ENST00000399240 EIF4G2P78344 907 aaKnown RBP eCLIP34.49■■■■□ 3.119e-7■■■■■ 45.8
RUNX1-205ENST00000399240 PLEKHH1Q9ULM0 1364 aa34.48■■■■□ 3.11
RUNX1-205ENST00000399240 EIF3AQ14152 1382 aaKnown RBP34.48■■■■□ 3.11
RUNX1-205ENST00000399240 NKTRP30414 1462 aaKnown RBP34.48■■■■□ 3.11
RUNX1-205ENST00000399240 QRICH2Q9H0J4 1663 aa34.47■■■■□ 3.11
RUNX1-205ENST00000399240 FAM135BQ49AJ0 1406 aa34.47■■■■□ 3.11
RUNX1-205ENST00000399240 HSPA5P11021 654 aaKnown RBP34.47■■■■□ 3.11
RUNX1-205ENST00000399240 WAPLQ7Z5K2 1190 aa34.47■■■■□ 3.11
RUNX1-205ENST00000399240 PRAM1Q96QH2 718 aa34.47■■■■□ 3.11
RUNX1-205ENST00000399240 ST20-MTHFSA0A0A6YYL1 179 aa34.45■■■■□ 3.11
RUNX1-205ENST00000399240 SIRT1Q96EB6 747 aa34.45■■■■□ 3.11
RUNX1-205ENST00000399240 HIRIP3Q9BW71 556 aaPredicted RBP34.45■■■■□ 3.1
RUNX1-205ENST00000399240 CENPJQ9HC77 1338 aaPredicted RBP34.43■■■■□ 3.1
RUNX1-205ENST00000399240 SAFB2Q14151 953 aaKnown RBP eCLIP34.42■■■■□ 3.11e-6■■■■□ 20.4
RUNX1-205ENST00000399240 POGKQ9P215 609 aa34.41■■■■□ 3.1
RUNX1-205ENST00000399240 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.41■■■■□ 3.1
RUNX1-205ENST00000399240 RBM33Q96EV2 1170 aaKnown RBP34.39■■■■□ 3.1
RUNX1-205ENST00000399240 XIRP1Q702N8 1843 aaKnown RBP34.39■■■■□ 3.1
RUNX1-205ENST00000399240 LTBP4Q8N2S1 1624 aa34.38■■■■□ 3.09
RUNX1-205ENST00000399240 PROSER2Q86WR7 435 aaPredicted RBP34.36■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms