RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 CAMSAP2Q08AD1 1489 aa18.31■□□□□ 0.52
RPRD1A-202ENST00000399022 MINK1Q8N4C8 1332 aaPredicted RBP18.31■□□□□ 0.52
RPRD1A-202ENST00000399022 NCOA1Q15788 1441 aa18.31■□□□□ 0.52
RPRD1A-202ENST00000399022 TERF2IPQ9NYB0 399 aa18.31■□□□□ 0.52
RPRD1A-202ENST00000399022 SMG6Q86US8 1419 aaKnown RBP18.3■□□□□ 0.52
RPRD1A-202ENST00000399022 GRIN2AQ12879 1464 aa18.3■□□□□ 0.52
RPRD1A-202ENST00000399022 APBB1O00213 710 aa18.29■□□□□ 0.52
RPRD1A-202ENST00000399022 PTMSP20962 102 aa18.29■□□□□ 0.52
RPRD1A-202ENST00000399022 CYB5RLQ6IPT4 315 aa18.29■□□□□ 0.52
RPRD1A-202ENST00000399022 CALD1Q05682 793 aaKnown RBP18.29■□□□□ 0.52
RPRD1A-202ENST00000399022 CHAF1AQ13111 956 aaPredicted RBP18.28■□□□□ 0.52
RPRD1A-202ENST00000399022 CASC1Q6TDU7 716 aa18.28■□□□□ 0.52
RPRD1A-202ENST00000399022 VGFO15240 615 aaPredicted RBP18.27■□□□□ 0.52
RPRD1A-202ENST00000399022 E9PSI1 815 aa18.27■□□□□ 0.52
RPRD1A-202ENST00000399022 A0A0U1RQG5 324 aaPredicted RBP18.27■□□□□ 0.51
RPRD1A-202ENST00000399022 CHMP5Q9NZZ3 219 aa18.26■□□□□ 0.51
RPRD1A-202ENST00000399022 PPP2R1AP30153 589 aa18.26■□□□□ 0.51
RPRD1A-202ENST00000399022 ELL2O00472 640 aaPredicted RBP18.26■□□□□ 0.51
RPRD1A-202ENST00000399022 DDX49Q9Y6V7 483 aaKnown RBP18.26■□□□□ 0.51
RPRD1A-202ENST00000399022 CGNL1Q0VF96 1302 aa18.26■□□□□ 0.51
RPRD1A-202ENST00000399022 KIAA2012Q0VF49 1180 aa18.25■□□□□ 0.51
RPRD1A-202ENST00000399022 RPRD2Q5VT52 1461 aaKnown RBP18.25■□□□□ 0.51
RPRD1A-202ENST00000399022 MAGI1Q96QZ7 1491 aaPredicted RBP18.25■□□□□ 0.51
RPRD1A-202ENST00000399022 MRE11P49959 708 aa18.25■□□□□ 0.51
RPRD1A-202ENST00000399022 IPO8O15397 1037 aaKnown RBP18.24■□□□□ 0.51
RPRD1A-202ENST00000399022 EVC2Q86UK5 1308 aa18.24■□□□□ 0.51
RPRD1A-202ENST00000399022 OSCARQ8IYS5 282 aa18.24■□□□□ 0.51
RPRD1A-202ENST00000399022 HDGFP51858 240 aaKnown RBP18.22■□□□□ 0.51
RPRD1A-202ENST00000399022 SCAPERQ9BY12 1400 aa18.22■□□□□ 0.51
RPRD1A-202ENST00000399022 UGGT2Q9NYU1 1516 aa18.21■□□□□ 0.51
RPRD1A-202ENST00000399022 TRAK2O60296 914 aa18.21■□□□□ 0.51
RPRD1A-202ENST00000399022 RRP9O43818 475 aaKnown RBP18.2■□□□□ 0.5
RPRD1A-202ENST00000399022 CHMP4BQ9H444 224 aaKnown RBP18.2■□□□□ 0.5
RPRD1A-202ENST00000399022 CABP2Q9NPB3 220 aa18.2■□□□□ 0.5
RPRD1A-202ENST00000399022 SLC12A5Q9H2X9 1139 aa18.2■□□□□ 0.5
RPRD1A-202ENST00000399022 GGNBP2Q9H3C7 697 aa18.2■□□□□ 0.5
RPRD1A-202ENST00000399022 PODXL2Q9NZ53 605 aa18.19■□□□□ 0.5
RPRD1A-202ENST00000399022 SKOR2Q2VWA4 1001 aaPredicted RBP18.18■□□□□ 0.5
RPRD1A-202ENST00000399022 PANK1Q8TE04 598 aa18.18■□□□□ 0.5
RPRD1A-202ENST00000399022 MTHFSP49914 203 aa18.18■□□□□ 0.5
RPRD1A-202ENST00000399022 ZMYND15Q9H091 742 aa18.18■□□□□ 0.5
RPRD1A-202ENST00000399022 GPATCH8Q9UKJ3 1502 aaKnown RBP18.17■□□□□ 0.5
RPRD1A-202ENST00000399022 RBM10P98175 930 aaKnown RBP18.17■□□□□ 0.5
RPRD1A-202ENST00000399022 STAC3Q96MF2 364 aa18.17■□□□□ 0.5
RPRD1A-202ENST00000399022 R3HCC1Q9Y3T6 440 aaKnown RBP18.16■□□□□ 0.5
RPRD1A-202ENST00000399022 ERBINQ96RT1 1412 aa18.16■□□□□ 0.5
RPRD1A-202ENST00000399022 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.16■□□□□ 0.5
RPRD1A-202ENST00000399022 CCDC141Q6ZP82 1450 aa18.15■□□□□ 0.5
RPRD1A-202ENST00000399022 RTF1Q92541 710 aaKnown RBP18.15■□□□□ 0.5
RPRD1A-202ENST00000399022 NUP153P49790 1475 aaKnown RBP18.15■□□□□ 0.5
RPRD1A-202ENST00000399022 RUNDC1Q96C34 613 aa18.14■□□□□ 0.49
RPRD1A-202ENST00000399022 A0A0G2JS52 829 aa18.14■□□□□ 0.49
RPRD1A-202ENST00000399022 ESPNB1AK53 854 aa18.14■□□□□ 0.49
RPRD1A-202ENST00000399022 TRHP20396 242 aaPredicted RBP18.14■□□□□ 0.49
RPRD1A-202ENST00000399022 TCP11L2Q8N4U5 519 aa18.14■□□□□ 0.49
RPRD1A-202ENST00000399022 CTTNBP2Q8WZ74 1663 aa18.13■□□□□ 0.49
RPRD1A-202ENST00000399022 CFAP43Q8NDM7 1665 aa18.13■□□□□ 0.49
RPRD1A-202ENST00000399022 FOXD4L5Q5VV16 416 aaPredicted RBP18.13■□□□□ 0.49
RPRD1A-202ENST00000399022 ZKSCAN2Q63HK3 967 aa18.13■□□□□ 0.49
RPRD1A-202ENST00000399022 FOXD4L4Q8WXT5 416 aaPredicted RBP18.13■□□□□ 0.49
RPRD1A-202ENST00000399022 BCAR3O75815 825 aa18.13■□□□□ 0.49
RPRD1A-202ENST00000399022 TPM2P07951 284 aa18.13■□□□□ 0.49
RPRD1A-202ENST00000399022 C22orf23Q9BZE7 217 aa18.12■□□□□ 0.49
RPRD1A-202ENST00000399022 RIPK4P57078 832 aa18.11■□□□□ 0.49
RPRD1A-202ENST00000399022 RAPGEF3O95398 923 aa18.1■□□□□ 0.49
RPRD1A-202ENST00000399022 DRC7Q8IY82 874 aa18.1■□□□□ 0.49
RPRD1A-202ENST00000399022 DIAPH1O60610 1272 aaKnown RBP18.09■□□□□ 0.49
RPRD1A-202ENST00000399022 NASPP49321 788 aaPredicted RBP18.09■□□□□ 0.49
RPRD1A-202ENST00000399022 PLEKHH2Q8IVE3 1493 aa18.09■□□□□ 0.49
RPRD1A-202ENST00000399022 SLC4A10Q6U841 1118 aa18.09■□□□□ 0.49
RPRD1A-202ENST00000399022 HMOX1P09601 288 aa18.08■□□□□ 0.48
RPRD1A-202ENST00000399022 OS9Q13438 667 aaPredicted RBP18.08■□□□□ 0.48
RPRD1A-202ENST00000399022 GRPEL1Q9HAV7 217 aa18.08■□□□□ 0.48
RPRD1A-202ENST00000399022 LTV1Q96GA3 475 aaPredicted RBP18.07■□□□□ 0.48
RPRD1A-202ENST00000399022 MCM4P33991 863 aa18.07■□□□□ 0.48
RPRD1A-202ENST00000399022 FAM69CQ0P6D2 419 aa18.07■□□□□ 0.48
RPRD1A-202ENST00000399022 KIAA1211Q6ZU35 1233 aa18.07■□□□□ 0.48
RPRD1A-202ENST00000399022 NGDNQ8NEJ9 315 aaKnown RBP18.07■□□□□ 0.48
RPRD1A-202ENST00000399022 SYAP1Q96A49 352 aaPredicted RBP18.07■□□□□ 0.48
RPRD1A-202ENST00000399022 KIF14Q15058 1648 aa18.07■□□□□ 0.48
RPRD1A-202ENST00000399022 DZIP1LQ8IYY4 767 aaKnown RBP18.06■□□□□ 0.48
RPRD1A-202ENST00000399022 ATP10BO94823 1461 aa18.06■□□□□ 0.48
RPRD1A-202ENST00000399022 MAP7D2Q96T17 732 aa18.05■□□□□ 0.48
RPRD1A-202ENST00000399022 HAP1P54257 671 aaPredicted RBP18.05■□□□□ 0.48
RPRD1A-202ENST00000399022 C20orf194Q5TEA3 1177 aa18.05■□□□□ 0.48
RPRD1A-202ENST00000399022 NGEFQ8N5V2 710 aa18.04■□□□□ 0.48
RPRD1A-202ENST00000399022 COG3Q96JB2 828 aa18.04■□□□□ 0.48
RPRD1A-202ENST00000399022 RAPGEF6Q8TEU7 1601 aa18.04■□□□□ 0.48
RPRD1A-202ENST00000399022 GOLGA6L4A6NEF3 574 aa18.03■□□□□ 0.48
RPRD1A-202ENST00000399022 ANKRD45Q5TZF3 282 aa18.03■□□□□ 0.48
RPRD1A-202ENST00000399022 NOL8Q76FK4 1167 aaKnown RBP18.03■□□□□ 0.48
RPRD1A-202ENST00000399022 TCOF1Q13428 1488 aaKnown RBP18.03■□□□□ 0.48
RPRD1A-202ENST00000399022 ZRSR1Q15695 479 aaKnown RBP18.03■□□□□ 0.48
RPRD1A-202ENST00000399022 FOXD4L6Q3SYB3 417 aaPredicted RBP18.03■□□□□ 0.48
RPRD1A-202ENST00000399022 FOXD4L3Q6VB84 417 aaPredicted RBP18.03■□□□□ 0.48
RPRD1A-202ENST00000399022 AMPHP49418 695 aa18.02■□□□□ 0.48
RPRD1A-202ENST00000399022 CFAP44Q96MT7 982 aa18.02■□□□□ 0.48
RPRD1A-202ENST00000399022 CSPP1Q1MSJ5 1256 aa18.02■□□□□ 0.47
RPRD1A-202ENST00000399022 TSR2Q969E8 191 aaKnown RBP18.02■□□□□ 0.47
RPRD1A-202ENST00000399022 DISP3Q9P2K9 1392 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms