RNA–Protein interactions for RNA: ENST00000399010.5

TTC3-203, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene TTC3, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-203ENST00000399010 RIMS2Q9UQ26 1411 aa26.58■■□□□ 1.85
TTC3-203ENST00000399010 TMEM2Q9UHN6 1383 aa26.58■■□□□ 1.85
TTC3-203ENST00000399010 SLIT1O75093 1534 aa26.56■■□□□ 1.84
TTC3-203ENST00000399010 RPGRIP1LQ68CZ1 1315 aa26.56■■□□□ 1.84
TTC3-203ENST00000399010 ZFYVE9O95405 1425 aa26.56■■□□□ 1.84
TTC3-203ENST00000399010 TIMELESSQ9UNS1 1208 aa26.56■■□□□ 1.84
TTC3-203ENST00000399010 ARHGAP23Q9P227 1491 aa26.54■■□□□ 1.84
TTC3-203ENST00000399010 HSPA2P54652 639 aa26.52■■□□□ 1.84
TTC3-203ENST00000399010 MYOM2P54296 1465 aa26.52■■□□□ 1.84
TTC3-203ENST00000399010 SENP3Q9H4L4 574 aaPredicted RBP26.51■■□□□ 1.84
TTC3-203ENST00000399010 PPP1R15AO75807 674 aaPredicted RBP26.5■■□□□ 1.83
TTC3-203ENST00000399010 POLR1AO95602 1720 aaPredicted RBP26.5■■□□□ 1.83
TTC3-203ENST00000399010 ADGRF5Q8IZF2 1346 aa26.49■■□□□ 1.83
TTC3-203ENST00000399010 LTKP29376 864 aa26.48■■□□□ 1.83
TTC3-203ENST00000399010 TXNDC2Q86VQ3 553 aa26.48■■□□□ 1.83
TTC3-203ENST00000399010 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.48■■□□□ 1.83
TTC3-203ENST00000399010 EID1Q9Y6B2 187 aa26.48■■□□□ 1.83
TTC3-203ENST00000399010 VGFO15240 615 aaPredicted RBP26.47■■□□□ 1.83
TTC3-203ENST00000399010 SCAF11Q99590 1463 aaKnown RBP26.47■■□□□ 1.83
TTC3-203ENST00000399010 HDGFP51858 240 aaKnown RBP26.47■■□□□ 1.83
TTC3-203ENST00000399010 AEBP2Q6ZN18 517 aaPredicted RBP26.47■■□□□ 1.83
TTC3-203ENST00000399010 ZEB1P37275 1124 aaPredicted RBP26.46■■□□□ 1.83
TTC3-203ENST00000399010 PRAG1Q86YV5 1406 aa26.45■■□□□ 1.82
TTC3-203ENST00000399010 NRXN1Q9ULB1 1477 aa26.45■■□□□ 1.82
TTC3-203ENST00000399010 ANKLE2Q86XL3 938 aa26.44■■□□□ 1.82
TTC3-203ENST00000399010 IQGAP1P46940 1657 aa26.43■■□□□ 1.82
TTC3-203ENST00000399010 STAC3Q96MF2 364 aa26.43■■□□□ 1.82
TTC3-203ENST00000399010 NBPF8Q3BBV2 869 aa26.42■■□□□ 1.82
TTC3-203ENST00000399010 PIK3C2GO75747 1445 aa26.42■■□□□ 1.82
TTC3-203ENST00000399010 NCKAP5LQ9HCH0 1330 aa26.41■■□□□ 1.82
TTC3-203ENST00000399010 NRXN3Q9Y4C0 1643 aa26.41■■□□□ 1.82
TTC3-203ENST00000399010 BCANQ96GW7 911 aa26.4■■□□□ 1.82
TTC3-203ENST00000399010 TRPM1Q7Z4N2 1603 aa26.39■■□□□ 1.82
TTC3-203ENST00000399010 STRCQ7RTU9 1775 aa26.39■■□□□ 1.82
TTC3-203ENST00000399010 PLEKHG1Q9ULL1 1385 aa26.39■■□□□ 1.81
TTC3-203ENST00000399010 SETBP1Q9Y6X0 1596 aa26.37■■□□□ 1.81
TTC3-203ENST00000399010 LAMC1P11047 1609 aa26.35■■□□□ 1.81
TTC3-203ENST00000399010 KIAA1210Q9ULL0 1709 aa26.35■■□□□ 1.81
TTC3-203ENST00000399010 ALKQ9UM73 1620 aa26.34■■□□□ 1.81
TTC3-203ENST00000399010 CFAP70Q5T0N1 1121 aa26.34■■□□□ 1.81
TTC3-203ENST00000399010 SETD1AO15047 1707 aaKnown RBP26.34■■□□□ 1.81
TTC3-203ENST00000399010 NPHP4O75161 1426 aaPredicted RBP26.34■■□□□ 1.81
TTC3-203ENST00000399010 MED14O60244 1454 aa26.33■■□□□ 1.8
TTC3-203ENST00000399010 RALGAPBQ86X10 1494 aa26.31■■□□□ 1.8
TTC3-203ENST00000399010 ADAMTS13Q76LX8 1427 aa26.31■■□□□ 1.8
TTC3-203ENST00000399010 SLC26A8Q96RN1 970 aa26.3■■□□□ 1.8
TTC3-203ENST00000399010 C14orf93Q9H972 538 aaKnown RBP26.3■■□□□ 1.8
TTC3-203ENST00000399010 NBPF1Q3BBV0 1214 aa26.29■■□□□ 1.8
TTC3-203ENST00000399010 DIP2AQ14689 1571 aa26.27■■□□□ 1.8
TTC3-203ENST00000399010 ROCK2O75116 1388 aaKnown RBP26.27■■□□□ 1.8
TTC3-203ENST00000399010 ASXL1Q8IXJ9 1541 aa26.27■■□□□ 1.8
TTC3-203ENST00000399010 TMEM132EQ6IEE7 984 aa26.24■■□□□ 1.79
TTC3-203ENST00000399010 ADGRB1O14514 1584 aa26.24■■□□□ 1.79
TTC3-203ENST00000399010 METP08581 1390 aa26.23■■□□□ 1.79
TTC3-203ENST00000399010 TBX22Q9Y458 520 aa26.21■■□□□ 1.79
TTC3-203ENST00000399010 CARD11Q9BXL7 1154 aa26.2■■□□□ 1.78
TTC3-203ENST00000399010 GPRASP1Q5JY77 1395 aa26.19■■□□□ 1.78
TTC3-203ENST00000399010 CHD2O14647 1828 aaKnown RBP26.16■■□□□ 1.78
TTC3-203ENST00000399010 YTHDC2Q9H6S0 1430 aaKnown RBP26.15■■□□□ 1.78
TTC3-203ENST00000399010 STK26Q9P289 416 aa26.15■■□□□ 1.78
TTC3-203ENST00000399010 PTPRUQ92729 1446 aa26.14■■□□□ 1.78
TTC3-203ENST00000399010 KNDC1Q76NI1 1749 aa26.12■■□□□ 1.77
TTC3-203ENST00000399010 ARHGEF28Q8N1W1 1705 aaKnown RBP26.12■■□□□ 1.77
TTC3-203ENST00000399010 TRAK1Q9UPV9 953 aa26.12■■□□□ 1.77
TTC3-203ENST00000399010 DMRT2Q9Y5R5 561 aa26.12■■□□□ 1.77
TTC3-203ENST00000399010 XRN1Q8IZH2 1706 aaKnown RBP26.11■■□□□ 1.77
TTC3-203ENST00000399010 LRPPRCP42704 1394 aaKnown RBP26.11■■□□□ 1.77
TTC3-203ENST00000399010 PIK3R4Q99570 1358 aa26.11■■□□□ 1.77
TTC3-203ENST00000399010 USP47Q96K76 1375 aa26.09■■□□□ 1.77
TTC3-203ENST00000399010 STRCP1A6NGW2 1772 aa26.09■■□□□ 1.77
TTC3-203ENST00000399010 AMOTL2Q9Y2J4 779 aa26.08■■□□□ 1.77
TTC3-203ENST00000399010 NWD1Q149M9 1564 aa26.07■■□□□ 1.76
TTC3-203ENST00000399010 CPS1P31327 1500 aa26.06■■□□□ 1.76
TTC3-203ENST00000399010 ABCC11Q96J66 1382 aa26.05■■□□□ 1.76
TTC3-203ENST00000399010 TECPR2O15040 1411 aa26.04■■□□□ 1.76
TTC3-203ENST00000399010 DLC1Q96QB1 1528 aa26.04■■□□□ 1.76
TTC3-203ENST00000399010 KCNA6P17658 529 aa26.04■■□□□ 1.76
TTC3-203ENST00000399010 EIF3AQ14152 1382 aaKnown RBP26.03■■□□□ 1.76
TTC3-203ENST00000399010 EIF4G2P78344 907 aaKnown RBP eCLIP26.03■■□□□ 1.761e-6■□□□□ 10
TTC3-203ENST00000399010 ROBO2Q9HCK4 1378 aa26.03■■□□□ 1.76
TTC3-203ENST00000399010 QRICH2Q9H0J4 1663 aa26.02■■□□□ 1.76
TTC3-203ENST00000399010 HSPA5P11021 654 aaKnown RBP26.02■■□□□ 1.76
TTC3-203ENST00000399010 HIRIP3Q9BW71 556 aaPredicted RBP26.02■■□□□ 1.76
TTC3-203ENST00000399010 ZNF335Q9H4Z2 1342 aaPredicted RBP26.02■■□□□ 1.76
TTC3-203ENST00000399010 PTCH1Q13635 1447 aa26■■□□□ 1.75
TTC3-203ENST00000399010 PRAM1Q96QH2 718 aa26■■□□□ 1.75
TTC3-203ENST00000399010 PLEKHH1Q9ULM0 1364 aa25.99■■□□□ 1.75
TTC3-203ENST00000399010 ST20-MTHFSA0A0A6YYL1 179 aa25.99■■□□□ 1.75
TTC3-203ENST00000399010 SAFB2Q14151 953 aaKnown RBP eCLIP25.99■■□□□ 1.75
TTC3-203ENST00000399010 WAPLQ7Z5K2 1190 aa25.99■■□□□ 1.75
TTC3-203ENST00000399010 POGKQ9P215 609 aa25.98■■□□□ 1.75
TTC3-203ENST00000399010 CENPJQ9HC77 1338 aaPredicted RBP25.98■■□□□ 1.75
TTC3-203ENST00000399010 NKTRP30414 1462 aaKnown RBP25.97■■□□□ 1.75
TTC3-203ENST00000399010 FAM135BQ49AJ0 1406 aa25.97■■□□□ 1.75
TTC3-203ENST00000399010 RBM33Q96EV2 1170 aaKnown RBP25.94■■□□□ 1.74
TTC3-203ENST00000399010 SIRT1Q96EB6 747 aa25.93■■□□□ 1.74
TTC3-203ENST00000399010 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.93■■□□□ 1.74
TTC3-203ENST00000399010 PROSER2Q86WR7 435 aaPredicted RBP25.92■■□□□ 1.74
TTC3-203ENST00000399010 NALCNQ8IZF0 1738 aa25.9■■□□□ 1.74
TTC3-203ENST00000399010 MINK1Q8N4C8 1332 aaPredicted RBP25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms