RNA–Protein interactions for RNA: ENST00000398896.5

USP19-204, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP19, Length 3,907 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-204ENST00000398896 AQRO60306 1485 aaKnown RBP eCLIP13.22□□□□□ -0.292e-6■■■■□ 23.4
USP19-204ENST00000398896 ZKSCAN5Q9Y2L8 839 aa13.21□□□□□ -0.29
USP19-204ENST00000398896 PKD2Q13563 968 aa13.21□□□□□ -0.29
USP19-204ENST00000398896 DUSP27Q5VZP5 1158 aa13.21□□□□□ -0.29
USP19-204ENST00000398896 PDCL2Q8N4E4 241 aa13.21□□□□□ -0.3
USP19-204ENST00000398896 PANK3Q9H999 370 aa13.2□□□□□ -0.3
USP19-204ENST00000398896 USP19O94966 1318 aa13.2□□□□□ -0.3
USP19-204ENST00000398896 DNAJC2Q99543 621 aaKnown RBP13.2□□□□□ -0.3
USP19-204ENST00000398896 ZNF500O60304 480 aaPredicted RBP13.19□□□□□ -0.3
USP19-204ENST00000398896 BRD2P25440 801 aaKnown RBP13.19□□□□□ -0.3
USP19-204ENST00000398896 RNF214Q8ND24 703 aa13.19□□□□□ -0.3
USP19-204ENST00000398896 DIAPH3Q9NSV4 1193 aa13.19□□□□□ -0.3
USP19-204ENST00000398896 APAF1O14727 1248 aa13.18□□□□□ -0.3
USP19-204ENST00000398896 TMF1P82094 1093 aa13.18□□□□□ -0.3
USP19-204ENST00000398896 MYOM3Q5VTT5 1437 aa13.18□□□□□ -0.3
USP19-204ENST00000398896 KLHL40Q2TBA0 621 aa13.18□□□□□ -0.3
USP19-204ENST00000398896 ZNF777Q9ULD5 760 aaPredicted RBP13.18□□□□□ -0.3
USP19-204ENST00000398896 ZBTB22O15209 634 aa13.17□□□□□ -0.3
USP19-204ENST00000398896 NBPF1Q3BBV0 1214 aa13.17□□□□□ -0.3
USP19-204ENST00000398896 SYAP1Q96A49 352 aaPredicted RBP13.17□□□□□ -0.3
USP19-204ENST00000398896 PTPRKQ15262 1439 aa13.17□□□□□ -0.3
USP19-204ENST00000398896 NUCB2P80303 420 aa13.17□□□□□ -0.3
USP19-204ENST00000398896 PRIMPOLQ96LW4 560 aa13.17□□□□□ -0.3
USP19-204ENST00000398896 PTPN23Q9H3S7 1636 aa13.17□□□□□ -0.3
USP19-204ENST00000398896 SLFN5Q08AF3 891 aa13.17□□□□□ -0.3
USP19-204ENST00000398896 RGL3Q3MIN7 710 aa13.16□□□□□ -0.3
USP19-204ENST00000398896 DHX37Q8IY37 1157 aaKnown RBP13.16□□□□□ -0.3
USP19-204ENST00000398896 ANKRD30BQ9BXX2 1392 aa13.15□□□□□ -0.3
USP19-204ENST00000398896 IGF1RP08069 1367 aa13.15□□□□□ -0.3
USP19-204ENST00000398896 PLEKHH2Q8IVE3 1493 aa13.14□□□□□ -0.31
USP19-204ENST00000398896 CERS3Q8IU89 383 aa13.14□□□□□ -0.31
USP19-204ENST00000398896 PRPF40AO75400 957 aaKnown RBP13.13□□□□□ -0.31
USP19-204ENST00000398896 TSC1Q92574 1164 aa13.13□□□□□ -0.31
USP19-204ENST00000398896 TIGD1Q96MW7 591 aa13.13□□□□□ -0.31
USP19-204ENST00000398896 SPATA31E1Q6ZUB1 1445 aa13.13□□□□□ -0.31
USP19-204ENST00000398896 SSFA2P28290 1259 aa13.13□□□□□ -0.31
USP19-204ENST00000398896 RAB3GAP1Q15042 981 aa13.13□□□□□ -0.31
USP19-204ENST00000398896 MYRIPQ8NFW9 859 aa13.13□□□□□ -0.31
USP19-204ENST00000398896 CASKIN1Q8WXD9 1431 aa13.13□□□□□ -0.31
USP19-204ENST00000398896 MPNDQ8N594 471 aa13.12□□□□□ -0.31
USP19-204ENST00000398896 BCL2L13Q9BXK5 485 aa13.12□□□□□ -0.31
USP19-204ENST00000398896 TOP2BQ02880 1626 aa13.12□□□□□ -0.31
USP19-204ENST00000398896 TPRNQ4KMQ1 711 aa13.12□□□□□ -0.31
USP19-204ENST00000398896 RPRD2Q5VT52 1461 aaKnown RBP13.12□□□□□ -0.31
USP19-204ENST00000398896 K7ELQ4 463 aaPredicted RBP13.12□□□□□ -0.31
USP19-204ENST00000398896 TEX2Q8IWB9 1127 aa13.12□□□□□ -0.31
USP19-204ENST00000398896 PHF14O94880 888 aa13.11□□□□□ -0.31
USP19-204ENST00000398896 SECISBP2LQ93073 1101 aaKnown RBP13.11□□□□□ -0.31
USP19-204ENST00000398896 BAG4O95429 457 aaKnown RBP13.11□□□□□ -0.31
USP19-204ENST00000398896 ZSCAN23Q3MJ62 389 aa13.11□□□□□ -0.31
USP19-204ENST00000398896 FAM177BA6PVY3 158 aa13.1□□□□□ -0.31
USP19-204ENST00000398896 SMC5Q8IY18 1101 aa13.1□□□□□ -0.31
USP19-204ENST00000398896 CDCA8Q53HL2 280 aa13.1□□□□□ -0.31
USP19-204ENST00000398896 ANKRD30AQ9BXX3 1397 aa13.1□□□□□ -0.31
USP19-204ENST00000398896 ERICH4A6NGS2 130 aa13.1□□□□□ -0.31
USP19-204ENST00000398896 TRIM6-TRIM34B2RNG4 842 aa13.1□□□□□ -0.31
USP19-204ENST00000398896 RBM25P49756 843 aaKnown RBP13.1□□□□□ -0.31
USP19-204ENST00000398896 TRIM34Q9BYJ4 488 aa13.1□□□□□ -0.31
USP19-204ENST00000398896 TRERF1Q96PN7 1200 aa13.09□□□□□ -0.31
USP19-204ENST00000398896 FYCO1Q9BQS8 1478 aa13.09□□□□□ -0.31
USP19-204ENST00000398896 NGEFQ8N5V2 710 aa13.09□□□□□ -0.31
USP19-204ENST00000398896 ITPRIPQ8IWB1 547 aa13.09□□□□□ -0.31
USP19-204ENST00000398896 NINLQ9Y2I6 1382 aa13.09□□□□□ -0.31
USP19-204ENST00000398896 SNX21Q969T3 373 aa13.08□□□□□ -0.31
USP19-204ENST00000398896 CALCOCO1Q9P1Z2 691 aa13.08□□□□□ -0.31
USP19-204ENST00000398896 PRIM1P49642 420 aaKnown RBP13.08□□□□□ -0.32
USP19-204ENST00000398896 FOXD4L5Q5VV16 416 aaPredicted RBP13.08□□□□□ -0.32
USP19-204ENST00000398896 FOXD4L4Q8WXT5 416 aaPredicted RBP13.08□□□□□ -0.32
USP19-204ENST00000398896 TSPYL1Q9H0U9 437 aa13.08□□□□□ -0.32
USP19-204ENST00000398896 RBSNQ9H1K0 784 aa13.08□□□□□ -0.32
USP19-204ENST00000398896 SYCE3A1L190 88 aa13.08□□□□□ -0.32
USP19-204ENST00000398896 GOLGA6L6A8MZA4 724 aa13.07□□□□□ -0.32
USP19-204ENST00000398896 ATP2B3Q16720 1220 aa13.07□□□□□ -0.32
USP19-204ENST00000398896 CUX1P39880 1505 aa13.07□□□□□ -0.32
USP19-204ENST00000398896 TSPY26PQ9H489 355 aa13.07□□□□□ -0.32
USP19-204ENST00000398896 MBD3O95983 291 aa13.07□□□□□ -0.32
USP19-204ENST00000398896 ZNF445P59923 1031 aa13.07□□□□□ -0.32
USP19-204ENST00000398896 U2AF2P26368 475 aaKnown RBP eCLIP13.07□□□□□ -0.32
USP19-204ENST00000398896 IRX5P78411 483 aaPredicted RBP13.07□□□□□ -0.32
USP19-204ENST00000398896 NOLC1Q14978 699 aaKnown RBP eCLIP13.07□□□□□ -0.32
USP19-204ENST00000398896 PARD3Q8TEW0 1356 aa13.06□□□□□ -0.32
USP19-204ENST00000398896 PPP2R1AP30153 589 aa13.06□□□□□ -0.32
USP19-204ENST00000398896 ZKSCAN2Q63HK3 967 aa13.06□□□□□ -0.32
USP19-204ENST00000398896 FEZ1Q99689 392 aa13.06□□□□□ -0.32
USP19-204ENST00000398896 PCDHB15Q9Y5E8 787 aa13.06□□□□□ -0.32
USP19-204ENST00000398896 CASC1Q6TDU7 716 aa13.05□□□□□ -0.32
USP19-204ENST00000398896 CFAP44Q96MT7 982 aa13.05□□□□□ -0.32
USP19-204ENST00000398896 KIF16BQ96L93 1317 aa13.05□□□□□ -0.32
USP19-204ENST00000398896 ST18O60284 1047 aa13.05□□□□□ -0.32
USP19-204ENST00000398896 DRC7Q8IY82 874 aa13.05□□□□□ -0.32
USP19-204ENST00000398896 LNPKQ9C0E8 428 aa13.04□□□□□ -0.32
USP19-204ENST00000398896 NKTRP30414 1462 aaKnown RBP13.04□□□□□ -0.32
USP19-204ENST00000398896 DZIP1LQ8IYY4 767 aaKnown RBP13.04□□□□□ -0.32
USP19-204ENST00000398896 KDM5BQ9UGL1 1544 aa13.03□□□□□ -0.32
USP19-204ENST00000398896 CFTRP13569 1480 aa13.03□□□□□ -0.32
USP19-204ENST00000398896 LRSAM1Q6UWE0 723 aa13.03□□□□□ -0.32
USP19-204ENST00000398896 OGFRQ9NZT2 677 aa13.03□□□□□ -0.32
USP19-204ENST00000398896 JARID2Q92833 1246 aaPredicted RBP13.03□□□□□ -0.32
USP19-204ENST00000398896 RBM27Q9P2N5 1060 aaKnown RBP13.02□□□□□ -0.32
USP19-204ENST00000398896 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms