RNA–Protein interactions for RNA: ENST00000398548.5

PRDM15-202, Transcript of PR/SET domain 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM15, Length 6,654 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-202ENST00000398548 C9orf78Q9NZ63 289 aaPredicted RBP12.84□□□□□ -0.35
PRDM15-202ENST00000398548 PES1O00541 588 aaKnown RBP12.84□□□□□ -0.35
PRDM15-202ENST00000398548 FANCD2Q9BXW9 1451 aa12.84□□□□□ -0.35
PRDM15-202ENST00000398548 GOLGA6L19H0YKK7 550 aa12.84□□□□□ -0.35
PRDM15-202ENST00000398548 TPM2P07951 284 aa12.84□□□□□ -0.35
PRDM15-202ENST00000398548 RIPK4P57078 832 aa12.83□□□□□ -0.35
PRDM15-202ENST00000398548 NOL10Q9BSC4 688 aaKnown RBP12.83□□□□□ -0.35
PRDM15-202ENST00000398548 TRIM34Q9BYJ4 488 aa12.83□□□□□ -0.35
PRDM15-202ENST00000398548 MSH5O43196 834 aa12.83□□□□□ -0.36
PRDM15-202ENST00000398548 RUFY2Q8WXA3 655 aa12.83□□□□□ -0.36
PRDM15-202ENST00000398548 TSR1Q2NL82 804 aaKnown RBP12.83□□□□□ -0.36
PRDM15-202ENST00000398548 TTC5Q8N0Z6 440 aa12.83□□□□□ -0.36
PRDM15-202ENST00000398548 AMOTL1Q8IY63 956 aa12.83□□□□□ -0.36
PRDM15-202ENST00000398548 CTDP1Q9Y5B0 961 aaPredicted RBP12.83□□□□□ -0.36
PRDM15-202ENST00000398548 SMARCA4P51532 1647 aa12.83□□□□□ -0.36
PRDM15-202ENST00000398548 REC8O95072 547 aa12.82□□□□□ -0.36
PRDM15-202ENST00000398548 LRRFIP1Q32MZ4 808 aaKnown RBP12.82□□□□□ -0.36
PRDM15-202ENST00000398548 DZIP1LQ8IYY4 767 aaKnown RBP12.82□□□□□ -0.36
PRDM15-202ENST00000398548 TNNT3P45378 269 aaPredicted RBP12.82□□□□□ -0.36
PRDM15-202ENST00000398548 TCEAL9Q9UHQ7 104 aa12.82□□□□□ -0.36
PRDM15-202ENST00000398548 MCTP1Q6DN14 999 aa12.82□□□□□ -0.36
PRDM15-202ENST00000398548 SYNE3Q6ZMZ3 975 aa12.82□□□□□ -0.36
PRDM15-202ENST00000398548 GSE1Q14687 1217 aa12.82□□□□□ -0.36
PRDM15-202ENST00000398548 NECTIN2Q92692 538 aa12.82□□□□□ -0.36
PRDM15-202ENST00000398548 BECN2A8MW95 431 aa12.81□□□□□ -0.36
PRDM15-202ENST00000398548 API5Q9BZZ5 524 aaKnown RBP12.81□□□□□ -0.36
PRDM15-202ENST00000398548 RUNDC1Q96C34 613 aa12.8□□□□□ -0.36
PRDM15-202ENST00000398548 IFIT2P09913 472 aaKnown RBP12.8□□□□□ -0.36
PRDM15-202ENST00000398548 ZKSCAN1P17029 563 aaPredicted RBP12.8□□□□□ -0.36
PRDM15-202ENST00000398548 ANO8Q9HCE9 1232 aaPredicted RBP12.8□□□□□ -0.36
PRDM15-202ENST00000398548 ANO2Q9NQ90 1003 aa12.79□□□□□ -0.36
PRDM15-202ENST00000398548 ROCK1Q13464 1354 aa12.79□□□□□ -0.36
PRDM15-202ENST00000398548 MYOM3Q5VTT5 1437 aa12.79□□□□□ -0.36
PRDM15-202ENST00000398548 CPLX2Q6PUV4 134 aaKnown RBP12.79□□□□□ -0.36
PRDM15-202ENST00000398548 DDX58O95786 925 aaKnown RBP12.78□□□□□ -0.36
PRDM15-202ENST00000398548 TPM1P09493 284 aa12.78□□□□□ -0.36
PRDM15-202ENST00000398548 FKBP5Q13451 457 aaPredicted RBP12.77□□□□□ -0.36
PRDM15-202ENST00000398548 TRIM29Q14134 588 aa12.77□□□□□ -0.36
PRDM15-202ENST00000398548 RAD21O60216 631 aa12.77□□□□□ -0.36
PRDM15-202ENST00000398548 PSME1Q06323 249 aa12.77□□□□□ -0.37
PRDM15-202ENST00000398548 MEX3CQ5U5Q3 659 aaKnown RBP12.77□□□□□ -0.37
PRDM15-202ENST00000398548 APPP05067 770 aa12.76□□□□□ -0.37
PRDM15-202ENST00000398548 CCDC7Q96M83 1385 aa12.76□□□□□ -0.37
PRDM15-202ENST00000398548 KRI1Q8N9T8 703 aaKnown RBP12.76□□□□□ -0.37
PRDM15-202ENST00000398548 G3BP1Q13283 466 aaKnown RBP eCLIP12.76□□□□□ -0.37
PRDM15-202ENST00000398548 CCAR2Q8N163 923 aaKnown RBP12.75□□□□□ -0.37
PRDM15-202ENST00000398548 KIF7Q2M1P5 1343 aa12.75□□□□□ -0.37
PRDM15-202ENST00000398548 RNF20Q5VTR2 975 aa12.75□□□□□ -0.37
PRDM15-202ENST00000398548 CYB5RLQ6IPT4 315 aa12.75□□□□□ -0.37
PRDM15-202ENST00000398548 CHMP5Q9NZZ3 219 aa12.75□□□□□ -0.37
PRDM15-202ENST00000398548 FANCIQ9NVI1 1328 aa12.75□□□□□ -0.37
PRDM15-202ENST00000398548 CPLX1O14810 134 aa12.75□□□□□ -0.37
PRDM15-202ENST00000398548 GNAI1P63096 354 aa12.75□□□□□ -0.37
PRDM15-202ENST00000398548 TSPYL4Q9UJ04 414 aa12.75□□□□□ -0.37
PRDM15-202ENST00000398548 INTS3Q68E01 1043 aaKnown RBP12.75□□□□□ -0.37
PRDM15-202ENST00000398548 CCDC70Q6NSX1 233 aa12.75□□□□□ -0.37
PRDM15-202ENST00000398548 CCDC47Q96A33 483 aaKnown RBP12.75□□□□□ -0.37
PRDM15-202ENST00000398548 FGD6Q6ZV73 1430 aa12.74□□□□□ -0.37
PRDM15-202ENST00000398548 CUX1P39880 1505 aa12.74□□□□□ -0.37
PRDM15-202ENST00000398548 GAPVD1Q14C86 1478 aa12.74□□□□□ -0.37
PRDM15-202ENST00000398548 WWC1Q8IX03 1113 aa12.74□□□□□ -0.37
PRDM15-202ENST00000398548 HMOX1P09601 288 aa12.74□□□□□ -0.37
PRDM15-202ENST00000398548 HSP90AA2PQ14568 343 aaPredicted RBP12.74□□□□□ -0.37
PRDM15-202ENST00000398548 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.74□□□□□ -0.37
PRDM15-202ENST00000398548 FBXW7Q969H0 707 aa12.74□□□□□ -0.37
PRDM15-202ENST00000398548 TRDNQ13061 729 aa12.73□□□□□ -0.37
PRDM15-202ENST00000398548 ZNF644Q9H582 1327 aaPredicted RBP12.73□□□□□ -0.37
PRDM15-202ENST00000398548 PRDM2Q13029 1718 aa12.73□□□□□ -0.37
PRDM15-202ENST00000398548 VPS37DQ86XT2 251 aa12.73□□□□□ -0.37
PRDM15-202ENST00000398548 LNPKQ9C0E8 428 aa12.73□□□□□ -0.37
PRDM15-202ENST00000398548 RSPH6AQ9H0K4 717 aa12.73□□□□□ -0.37
PRDM15-202ENST00000398548 PCMTD1Q96MG8 357 aaPredicted RBP12.73□□□□□ -0.37
PRDM15-202ENST00000398548 BICD2Q8TD16 824 aa12.73□□□□□ -0.37
PRDM15-202ENST00000398548 SYTL4Q96C24 671 aaPredicted RBP12.73□□□□□ -0.37
PRDM15-202ENST00000398548 CWC22Q9HCG8 908 aaKnown RBP12.73□□□□□ -0.37
PRDM15-202ENST00000398548 FGD5Q6ZNL6 1462 aa12.72□□□□□ -0.37
PRDM15-202ENST00000398548 SETQ01105 290 aaPredicted RBP12.72□□□□□ -0.37
PRDM15-202ENST00000398548 STAC3Q96MF2 364 aa12.72□□□□□ -0.37
PRDM15-202ENST00000398548 CNTLNQ9NXG0 1405 aa12.72□□□□□ -0.37
PRDM15-202ENST00000398548 ZNF592Q92610 1267 aa12.72□□□□□ -0.37
PRDM15-202ENST00000398548 IGF1RP08069 1367 aa12.72□□□□□ -0.37
PRDM15-202ENST00000398548 HSP90AB4PQ58FF6 505 aa12.72□□□□□ -0.37
PRDM15-202ENST00000398548 SMC3Q9UQE7 1217 aa12.71□□□□□ -0.37
PRDM15-202ENST00000398548 ERC2O15083 957 aa12.71□□□□□ -0.38
PRDM15-202ENST00000398548 CNKSR2Q8WXI2 1034 aa12.71□□□□□ -0.38
PRDM15-202ENST00000398548 DHX16O60231 1041 aaKnown RBP12.71□□□□□ -0.38
PRDM15-202ENST00000398548 GGNBP2Q9H3C7 697 aa12.71□□□□□ -0.38
PRDM15-202ENST00000398548 VPS37CA5D8V6 355 aaPredicted RBP12.7□□□□□ -0.38
PRDM15-202ENST00000398548 NFXL1Q6ZNB6 911 aa12.7□□□□□ -0.38
PRDM15-202ENST00000398548 PANK1Q8TE04 598 aa12.7□□□□□ -0.38
PRDM15-202ENST00000398548 MIA2Q96PC5 1412 aa12.7□□□□□ -0.38
PRDM15-202ENST00000398548 NUCB2P80303 420 aa12.7□□□□□ -0.38
PRDM15-202ENST00000398548 C22orf23Q9BZE7 217 aa12.7□□□□□ -0.38
PRDM15-202ENST00000398548 HOOK1Q9UJC3 728 aaKnown RBP12.7□□□□□ -0.38
PRDM15-202ENST00000398548 CABP2Q9NPB3 220 aa12.7□□□□□ -0.38
PRDM15-202ENST00000398548 AAMPQ13685 434 aa12.69□□□□□ -0.38
PRDM15-202ENST00000398548 ANKRD20A12PQ8NF67 263 aa12.69□□□□□ -0.38
PRDM15-202ENST00000398548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.69□□□□□ -0.38
PRDM15-202ENST00000398548 ERICH2A1L162 156 aa12.69□□□□□ -0.38
PRDM15-202ENST00000398548 RIC3Q7Z5B4 369 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms