RNA–Protein interactions for RNA: ENST00000397898.7

SUMO3-203, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 3 BASIC

Gene SUMO3, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-203ENST00000397898 RIMS2Q9UQ26 1411 aa21.85■■□□□ 1.09
SUMO3-203ENST00000397898 ZFYVE9O95405 1425 aa21.85■■□□□ 1.09
SUMO3-203ENST00000397898 NUTM2DQ5VT03 806 aaPredicted RBP21.84■■□□□ 1.09
SUMO3-203ENST00000397898 SLIT1O75093 1534 aa21.84■■□□□ 1.09
SUMO3-203ENST00000397898 LMTK3Q96Q04 1460 aa21.84■■□□□ 1.09
SUMO3-203ENST00000397898 IFT172Q9UG01 1749 aa21.84■■□□□ 1.09
SUMO3-203ENST00000397898 PPLO60437 1756 aa21.84■■□□□ 1.09
SUMO3-203ENST00000397898 ARHGAP23Q9P227 1491 aa21.83■■□□□ 1.09
SUMO3-203ENST00000397898 STAC3Q96MF2 364 aa21.82■■□□□ 1.08
SUMO3-203ENST00000397898 VGFO15240 615 aaPredicted RBP21.82■■□□□ 1.08
SUMO3-203ENST00000397898 HDGFP51858 240 aaKnown RBP21.82■■□□□ 1.08
SUMO3-203ENST00000397898 PPP1R15AO75807 674 aaPredicted RBP21.81■■□□□ 1.08
SUMO3-203ENST00000397898 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.81■■□□□ 1.08
SUMO3-203ENST00000397898 MYOM2P54296 1465 aa21.81■■□□□ 1.08
SUMO3-203ENST00000397898 ADGRF5Q8IZF2 1346 aa21.79■■□□□ 1.08
SUMO3-203ENST00000397898 LTKP29376 864 aa21.79■■□□□ 1.08
SUMO3-203ENST00000397898 TXNDC2Q86VQ3 553 aa21.79■■□□□ 1.08
SUMO3-203ENST00000397898 EID1Q9Y6B2 187 aa21.79■■□□□ 1.08
SUMO3-203ENST00000397898 HSPA2P54652 639 aa21.78■■□□□ 1.08
SUMO3-203ENST00000397898 NRXN1Q9ULB1 1477 aa21.76■■□□□ 1.07
SUMO3-203ENST00000397898 PRAG1Q86YV5 1406 aa21.76■■□□□ 1.07
SUMO3-203ENST00000397898 ANKLE2Q86XL3 938 aa21.76■■□□□ 1.07
SUMO3-203ENST00000397898 SCAF11Q99590 1463 aaKnown RBP21.76■■□□□ 1.07
SUMO3-203ENST00000397898 NBPF8Q3BBV2 869 aa21.75■■□□□ 1.07
SUMO3-203ENST00000397898 PIK3C2GO75747 1445 aa21.74■■□□□ 1.07
SUMO3-203ENST00000397898 AEBP2Q6ZN18 517 aaPredicted RBP21.73■■□□□ 1.07
SUMO3-203ENST00000397898 SENP3Q9H4L4 574 aaPredicted RBP21.73■■□□□ 1.07
SUMO3-203ENST00000397898 PLEKHG1Q9ULL1 1385 aa21.71■■□□□ 1.07
SUMO3-203ENST00000397898 NCKAP5LQ9HCH0 1330 aa21.7■■□□□ 1.06
SUMO3-203ENST00000397898 BCANQ96GW7 911 aa21.69■■□□□ 1.06
SUMO3-203ENST00000397898 POLR1AO95602 1720 aaPredicted RBP21.68■■□□□ 1.06
SUMO3-203ENST00000397898 SETBP1Q9Y6X0 1596 aa21.67■■□□□ 1.06
SUMO3-203ENST00000397898 CFAP70Q5T0N1 1121 aa21.67■■□□□ 1.06
SUMO3-203ENST00000397898 C14orf93Q9H972 538 aaKnown RBP21.66■■□□□ 1.06
SUMO3-203ENST00000397898 MED14O60244 1454 aa21.66■■□□□ 1.06
SUMO3-203ENST00000397898 NRXN3Q9Y4C0 1643 aa21.66■■□□□ 1.06
SUMO3-203ENST00000397898 TRPM1Q7Z4N2 1603 aa21.65■■□□□ 1.06
SUMO3-203ENST00000397898 IQGAP1P46940 1657 aa21.65■■□□□ 1.06
SUMO3-203ENST00000397898 NPHP4O75161 1426 aaPredicted RBP21.65■■□□□ 1.06
SUMO3-203ENST00000397898 ADAMTS13Q76LX8 1427 aa21.64■■□□□ 1.05
SUMO3-203ENST00000397898 RALGAPBQ86X10 1494 aa21.64■■□□□ 1.05
SUMO3-203ENST00000397898 ALKQ9UM73 1620 aa21.64■■□□□ 1.05
SUMO3-203ENST00000397898 NBPF1Q3BBV0 1214 aa21.63■■□□□ 1.05
SUMO3-203ENST00000397898 LAMC1P11047 1609 aa21.63■■□□□ 1.05
SUMO3-203ENST00000397898 KIAA1210Q9ULL0 1709 aa21.62■■□□□ 1.05
SUMO3-203ENST00000397898 SLC26A8Q96RN1 970 aa21.62■■□□□ 1.05
SUMO3-203ENST00000397898 ROCK2O75116 1388 aaKnown RBP21.62■■□□□ 1.05
SUMO3-203ENST00000397898 STRCQ7RTU9 1775 aa21.61■■□□□ 1.05
SUMO3-203ENST00000397898 TBX22Q9Y458 520 aa21.59■■□□□ 1.05
SUMO3-203ENST00000397898 SETD1AO15047 1707 aaKnown RBP21.59■■□□□ 1.05
SUMO3-203ENST00000397898 TMEM132EQ6IEE7 984 aa21.59■■□□□ 1.05
SUMO3-203ENST00000397898 DIP2AQ14689 1571 aa21.58■■□□□ 1.05
SUMO3-203ENST00000397898 METP08581 1390 aa21.57■■□□□ 1.04
SUMO3-203ENST00000397898 GPRASP1Q5JY77 1395 aa21.57■■□□□ 1.04
SUMO3-203ENST00000397898 ADGRB1O14514 1584 aa21.57■■□□□ 1.04
SUMO3-203ENST00000397898 ASXL1Q8IXJ9 1541 aa21.57■■□□□ 1.04
SUMO3-203ENST00000397898 CARD11Q9BXL7 1154 aa21.56■■□□□ 1.04
SUMO3-203ENST00000397898 DMRT2Q9Y5R5 561 aa21.51■■□□□ 1.03
SUMO3-203ENST00000397898 YTHDC2Q9H6S0 1430 aaKnown RBP21.51■■□□□ 1.03
SUMO3-203ENST00000397898 PIK3R4Q99570 1358 aa21.51■■□□□ 1.03
SUMO3-203ENST00000397898 STK26Q9P289 416 aa21.5■■□□□ 1.03
SUMO3-203ENST00000397898 LRPPRCP42704 1394 aaKnown RBP21.49■■□□□ 1.03
SUMO3-203ENST00000397898 PTPRUQ92729 1446 aa21.49■■□□□ 1.03
SUMO3-203ENST00000397898 TRAK1Q9UPV9 953 aa21.48■■□□□ 1.03
SUMO3-203ENST00000397898 USP47Q96K76 1375 aa21.47■■□□□ 1.03
SUMO3-203ENST00000397898 AMOTL2Q9Y2J4 779 aa21.46■■□□□ 1.03
SUMO3-203ENST00000397898 ABCC11Q96J66 1382 aa21.46■■□□□ 1.03
SUMO3-203ENST00000397898 EIF4G2P78344 907 aaKnown RBP eCLIP21.44■■□□□ 1.023e-7■■■■■ 67
SUMO3-203ENST00000397898 CHD2O14647 1828 aaKnown RBP21.44■■□□□ 1.02
SUMO3-203ENST00000397898 TECPR2O15040 1411 aa21.43■■□□□ 1.02
SUMO3-203ENST00000397898 EIF3AQ14152 1382 aaKnown RBP21.43■■□□□ 1.02
SUMO3-203ENST00000397898 KCNA6P17658 529 aa21.43■■□□□ 1.02
SUMO3-203ENST00000397898 XRN1Q8IZH2 1706 aaKnown RBP21.42■■□□□ 1.02
SUMO3-203ENST00000397898 KNDC1Q76NI1 1749 aa21.42■■□□□ 1.02
SUMO3-203ENST00000397898 DLC1Q96QB1 1528 aa21.42■■□□□ 1.02
SUMO3-203ENST00000397898 HSPA5P11021 654 aaKnown RBP21.41■■□□□ 1.02
SUMO3-203ENST00000397898 NWD1Q149M9 1564 aa21.4■■□□□ 1.02
SUMO3-203ENST00000397898 CPS1P31327 1500 aa21.4■■□□□ 1.02
SUMO3-203ENST00000397898 ARHGEF28Q8N1W1 1705 aaKnown RBP21.4■■□□□ 1.02
SUMO3-203ENST00000397898 ROBO2Q9HCK4 1378 aa21.4■■□□□ 1.02
SUMO3-203ENST00000397898 ST20-MTHFSA0A0A6YYL1 179 aa21.4■■□□□ 1.02
SUMO3-203ENST00000397898 SIRT1Q96EB6 747 aa21.39■■□□□ 1.01
SUMO3-203ENST00000397898 PRAM1Q96QH2 718 aa21.39■■□□□ 1.01
SUMO3-203ENST00000397898 PTCH1Q13635 1447 aa21.39■■□□□ 1.01
SUMO3-203ENST00000397898 HIRIP3Q9BW71 556 aaPredicted RBP21.38■■□□□ 1.01
SUMO3-203ENST00000397898 FAM135BQ49AJ0 1406 aa21.38■■□□□ 1.01
SUMO3-203ENST00000397898 ZNF335Q9H4Z2 1342 aaPredicted RBP21.38■■□□□ 1.01
SUMO3-203ENST00000397898 WAPLQ7Z5K2 1190 aa21.38■■□□□ 1.01
SUMO3-203ENST00000397898 CENPJQ9HC77 1338 aaPredicted RBP21.37■■□□□ 1.01
SUMO3-203ENST00000397898 POGKQ9P215 609 aa21.37■■□□□ 1.01
SUMO3-203ENST00000397898 PLEKHH1Q9ULM0 1364 aa21.36■■□□□ 1.01
SUMO3-203ENST00000397898 STRCP1A6NGW2 1772 aa21.36■■□□□ 1.01
SUMO3-203ENST00000397898 SAFB2Q14151 953 aaKnown RBP eCLIP21.36■■□□□ 1.01
SUMO3-203ENST00000397898 NKTRP30414 1462 aaKnown RBP21.35■■□□□ 1.01
SUMO3-203ENST00000397898 TESK2Q96S53 571 aa21.32■■□□□ 1
SUMO3-203ENST00000397898 QRICH2Q9H0J4 1663 aa21.31■■□□□ 1
SUMO3-203ENST00000397898 PROSER2Q86WR7 435 aaPredicted RBP21.31■■□□□ 1
SUMO3-203ENST00000397898 SBNO2Q9Y2G9 1366 aa21.3■■□□□ 1
SUMO3-203ENST00000397898 RBM33Q96EV2 1170 aaKnown RBP21.3■■□□□ 1
SUMO3-203ENST00000397898 MINK1Q8N4C8 1332 aaPredicted RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 267.4 ms