RNA–Protein interactions for RNA: ENST00000397821.7

SH3KBP1-205, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3KBP1, Length 4,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-205ENST00000397821 IFFO2Q5TF58 517 aa17.66■□□□□ 0.42
SH3KBP1-205ENST00000397821 ANO2Q9NQ90 1003 aa17.66■□□□□ 0.42
SH3KBP1-205ENST00000397821 KIF3AQ9Y496 699 aa17.66■□□□□ 0.42
SH3KBP1-205ENST00000397821 RUNDC1Q96C34 613 aa17.65■□□□□ 0.42
SH3KBP1-205ENST00000397821 MTERF4Q7Z6M4 381 aaKnown RBP17.65■□□□□ 0.42
SH3KBP1-205ENST00000397821 CCDC34Q96HJ3 373 aa17.65■□□□□ 0.42
SH3KBP1-205ENST00000397821 CHMP4AQ9BY43 222 aa17.65■□□□□ 0.42
SH3KBP1-205ENST00000397821 PDZRN3Q9UPQ7 1066 aa17.65■□□□□ 0.42
SH3KBP1-205ENST00000397821 HDAC5Q9UQL6 1122 aa17.65■□□□□ 0.42
SH3KBP1-205ENST00000397821 AAMPQ13685 434 aa17.64■□□□□ 0.41
SH3KBP1-205ENST00000397821 CREBRFQ8IUR6 639 aa17.64■□□□□ 0.41
SH3KBP1-205ENST00000397821 IGF1RP08069 1367 aa17.64■□□□□ 0.41
SH3KBP1-205ENST00000397821 HDGFP51858 240 aaKnown RBP17.64■□□□□ 0.41
SH3KBP1-205ENST00000397821 FGD5Q6ZNL6 1462 aa17.64■□□□□ 0.41
SH3KBP1-205ENST00000397821 RIPK4P57078 832 aa17.63■□□□□ 0.41
SH3KBP1-205ENST00000397821 FAM184AQ8NB25 1140 aa17.63■□□□□ 0.41
SH3KBP1-205ENST00000397821 SMG6Q86US8 1419 aaKnown RBP17.63■□□□□ 0.41
SH3KBP1-205ENST00000397821 A0A0U1RQG5 324 aaPredicted RBP17.63■□□□□ 0.41
SH3KBP1-205ENST00000397821 RRBP1Q9P2E9 1410 aaKnown RBP17.62■□□□□ 0.41
SH3KBP1-205ENST00000397821 GORABQ5T7V8 394 aa17.62■□□□□ 0.41
SH3KBP1-205ENST00000397821 INTS3Q68E01 1043 aaKnown RBP17.62■□□□□ 0.41
SH3KBP1-205ENST00000397821 CCDC39Q9UFE4 941 aa17.62■□□□□ 0.41
SH3KBP1-205ENST00000397821 TPM3P06753 285 aa17.62■□□□□ 0.41
SH3KBP1-205ENST00000397821 ESPNB1AK53 854 aa17.62■□□□□ 0.41
SH3KBP1-205ENST00000397821 ZNF644Q9H582 1327 aaPredicted RBP17.61■□□□□ 0.41
SH3KBP1-205ENST00000397821 NOC3LQ8WTT2 800 aaKnown RBP17.61■□□□□ 0.41
SH3KBP1-205ENST00000397821 API5Q9BZZ5 524 aaKnown RBP17.61■□□□□ 0.41
SH3KBP1-205ENST00000397821 IFT57Q9NWB7 429 aa17.61■□□□□ 0.41
SH3KBP1-205ENST00000397821 LRRC9Q6ZRR7 1453 aa17.61■□□□□ 0.41
SH3KBP1-205ENST00000397821 NBPF8Q3BBV2 869 aa17.61■□□□□ 0.41
SH3KBP1-205ENST00000397821 VPS37CA5D8V6 355 aaPredicted RBP17.6■□□□□ 0.41
SH3KBP1-205ENST00000397821 GRPEL1Q9HAV7 217 aa17.6■□□□□ 0.41
SH3KBP1-205ENST00000397821 BCAR3O75815 825 aa17.6■□□□□ 0.41
SH3KBP1-205ENST00000397821 BCL11BQ9C0K0 894 aaPredicted RBP17.6■□□□□ 0.41
SH3KBP1-205ENST00000397821 DIAPH3Q9NSV4 1193 aa17.6■□□□□ 0.41
SH3KBP1-205ENST00000397821 CCDC173Q0VFZ6 552 aa17.59■□□□□ 0.41
SH3KBP1-205ENST00000397821 BICD2Q8TD16 824 aa17.59■□□□□ 0.41
SH3KBP1-205ENST00000397821 MYOM3Q5VTT5 1437 aa17.59■□□□□ 0.41
SH3KBP1-205ENST00000397821 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.59■□□□□ 0.41
SH3KBP1-205ENST00000397821 MCM4P33991 863 aa17.59■□□□□ 0.41
SH3KBP1-205ENST00000397821 ZNF330Q9Y3S2 320 aaPredicted RBP17.58■□□□□ 0.41
SH3KBP1-205ENST00000397821 CFTRP13569 1480 aa17.58■□□□□ 0.4
SH3KBP1-205ENST00000397821 HOMER1Q86YM7 354 aa17.58■□□□□ 0.4
SH3KBP1-205ENST00000397821 CDC45O75419 566 aa17.58■□□□□ 0.4
SH3KBP1-205ENST00000397821 PDE3AQ14432 1141 aa17.58■□□□□ 0.4
SH3KBP1-205ENST00000397821 PRPF40AO75400 957 aaKnown RBP17.57■□□□□ 0.4
SH3KBP1-205ENST00000397821 SYNJ1O43426 1573 aa17.57■□□□□ 0.4
SH3KBP1-205ENST00000397821 ZKSCAN1P17029 563 aaPredicted RBP17.57■□□□□ 0.4
SH3KBP1-205ENST00000397821 SMC3Q9UQE7 1217 aa17.57■□□□□ 0.4
SH3KBP1-205ENST00000397821 NPHP1O15259 732 aa17.57■□□□□ 0.4
SH3KBP1-205ENST00000397821 RRP9O43818 475 aaKnown RBP17.57■□□□□ 0.4
SH3KBP1-205ENST00000397821 SKAP1Q86WV1 359 aa17.57■□□□□ 0.4
SH3KBP1-205ENST00000397821 TCP11L2Q8N4U5 519 aa17.57■□□□□ 0.4
SH3KBP1-205ENST00000397821 DIAPH1O60610 1272 aaKnown RBP17.56■□□□□ 0.4
SH3KBP1-205ENST00000397821 WDR97A6NE52 1622 aa17.56■□□□□ 0.4
SH3KBP1-205ENST00000397821 GPS2Q13227 327 aa17.56■□□□□ 0.4
SH3KBP1-205ENST00000397821 ISY1Q9ULR0 285 aaKnown RBP17.56■□□□□ 0.4
SH3KBP1-205ENST00000397821 NUTM2FA1L443 756 aa17.55■□□□□ 0.4
SH3KBP1-205ENST00000397821 AMPHP49418 695 aa17.55■□□□□ 0.4
SH3KBP1-205ENST00000397821 TEX35Q5T0J7 233 aa17.55■□□□□ 0.4
SH3KBP1-205ENST00000397821 EVC2Q86UK5 1308 aa17.55■□□□□ 0.4
SH3KBP1-205ENST00000397821 HMGXB3Q12766 1538 aa17.55■□□□□ 0.4
SH3KBP1-205ENST00000397821 PPP2R1AP30153 589 aa17.55■□□□□ 0.4
SH3KBP1-205ENST00000397821 LTV1Q96GA3 475 aaPredicted RBP17.55■□□□□ 0.4
SH3KBP1-205ENST00000397821 MBD3O95983 291 aa17.54■□□□□ 0.4
SH3KBP1-205ENST00000397821 RUFY2Q8WXA3 655 aa17.54■□□□□ 0.4
SH3KBP1-205ENST00000397821 ARAP1Q96P48 1450 aa17.54■□□□□ 0.4
SH3KBP1-205ENST00000397821 RASSF8Q8NHQ8 419 aa17.54■□□□□ 0.4
SH3KBP1-205ENST00000397821 MIA2Q96PC5 1412 aa17.54■□□□□ 0.4
SH3KBP1-205ENST00000397821 MPNDQ8N594 471 aa17.53■□□□□ 0.4
SH3KBP1-205ENST00000397821 SASS6Q6UVJ0 657 aa17.53■□□□□ 0.4
SH3KBP1-205ENST00000397821 HMGN5P82970 282 aaKnown RBP17.53■□□□□ 0.4
SH3KBP1-205ENST00000397821 CCDC9Q9Y3X0 531 aaKnown RBP17.53■□□□□ 0.4
SH3KBP1-205ENST00000397821 WASHC2CQ9Y4E1 1318 aa17.52■□□□□ 0.4
SH3KBP1-205ENST00000397821 PES1O00541 588 aaKnown RBP17.52■□□□□ 0.4
SH3KBP1-205ENST00000397821 BICRAQ9NZM4 1560 aa17.52■□□□□ 0.4
SH3KBP1-205ENST00000397821 RAD54L2Q9Y4B4 1467 aa17.52■□□□□ 0.39
SH3KBP1-205ENST00000397821 NEK4P51957 841 aa17.51■□□□□ 0.39
SH3KBP1-205ENST00000397821 TOMM22Q9NS69 142 aa17.51■□□□□ 0.39
SH3KBP1-205ENST00000397821 JPH4Q96JJ6 628 aa17.51■□□□□ 0.39
SH3KBP1-205ENST00000397821 FBXW7Q969H0 707 aa17.5■□□□□ 0.39
SH3KBP1-205ENST00000397821 TAF7LQ5H9L4 462 aa17.5■□□□□ 0.39
SH3KBP1-205ENST00000397821 MINK1Q8N4C8 1332 aaPredicted RBP17.5■□□□□ 0.39
SH3KBP1-205ENST00000397821 MTHFSP49914 203 aa17.49■□□□□ 0.39
SH3KBP1-205ENST00000397821 NECTIN2Q92692 538 aa17.49■□□□□ 0.39
SH3KBP1-205ENST00000397821 GAPVD1Q14C86 1478 aa17.49■□□□□ 0.39
SH3KBP1-205ENST00000397821 ERICH3Q5RHP9 1530 aa17.49■□□□□ 0.39
SH3KBP1-205ENST00000397821 RABEP1Q15276 862 aa17.49■□□□□ 0.39
SH3KBP1-205ENST00000397821 TPD52L1Q16890 204 aaPredicted RBP17.49■□□□□ 0.39
SH3KBP1-205ENST00000397821 NGDNQ8NEJ9 315 aaKnown RBP17.48■□□□□ 0.39
SH3KBP1-205ENST00000397821 COG3Q96JB2 828 aa17.48■□□□□ 0.39
SH3KBP1-205ENST00000397821 TSPY26PQ9H489 355 aa17.48■□□□□ 0.39
SH3KBP1-205ENST00000397821 MNS1Q8NEH6 495 aa17.48■□□□□ 0.39
SH3KBP1-205ENST00000397821 EXOSC9Q06265 439 aaKnown RBP17.48■□□□□ 0.39
SH3KBP1-205ENST00000397821 NBPF1Q3BBV0 1214 aa17.48■□□□□ 0.39
SH3KBP1-205ENST00000397821 CLSTN1O94985 981 aa17.47■□□□□ 0.39
SH3KBP1-205ENST00000397821 GNAI1P63096 354 aa17.47■□□□□ 0.39
SH3KBP1-205ENST00000397821 FKBP5Q13451 457 aaPredicted RBP17.47■□□□□ 0.39
SH3KBP1-205ENST00000397821 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.47■□□□□ 0.39
SH3KBP1-205ENST00000397821 ROCK1Q13464 1354 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms