RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 TAF7LQ5H9L4 462 aa19.57■□□□□ 0.72
LSS-202ENST00000397728 PHF23Q9BUL5 403 aaPredicted RBP19.57■□□□□ 0.72
LSS-202ENST00000397728 ROCK1Q13464 1354 aa19.57■□□□□ 0.72
LSS-202ENST00000397728 TAOK2Q9UL54 1235 aa19.57■□□□□ 0.72
LSS-202ENST00000397728 WDR62O43379 1518 aa19.56■□□□□ 0.72
LSS-202ENST00000397728 ANKRD30BQ9BXX2 1392 aa19.56■□□□□ 0.72
LSS-202ENST00000397728 EIF4G3O43432 1585 aaKnown RBP19.56■□□□□ 0.72
LSS-202ENST00000397728 IDI1Q13907 227 aa19.56■□□□□ 0.72
LSS-202ENST00000397728 HMOX1P09601 288 aa19.56■□□□□ 0.72
LSS-202ENST00000397728 SLC12A5Q9H2X9 1139 aa19.56■□□□□ 0.72
LSS-202ENST00000397728 CABP1Q9NZU7 370 aa19.56■□□□□ 0.72
LSS-202ENST00000397728 NAIPQ13075 1403 aa19.55■□□□□ 0.72
LSS-202ENST00000397728 FGD1P98174 961 aa19.55■□□□□ 0.72
LSS-202ENST00000397728 APAF1O14727 1248 aa19.55■□□□□ 0.72
LSS-202ENST00000397728 NGEFQ8N5V2 710 aa19.55■□□□□ 0.72
LSS-202ENST00000397728 STRN4Q9NRL3 753 aa19.54■□□□□ 0.72
LSS-202ENST00000397728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.54■□□□□ 0.725e-8■□□□□ 8.8
LSS-202ENST00000397728 NBPF8Q3BBV2 869 aa19.54■□□□□ 0.72
LSS-202ENST00000397728 XPCQ01831 940 aaPredicted RBP19.53■□□□□ 0.72
LSS-202ENST00000397728 THOC2Q8NI27 1593 aaKnown RBP19.52■□□□□ 0.72
LSS-202ENST00000397728 ADAMTS12P58397 1594 aa19.52■□□□□ 0.71
LSS-202ENST00000397728 EIF2S2P20042 333 aaKnown RBP19.52■□□□□ 0.71
LSS-202ENST00000397728 CCDC7Q96M83 1385 aa19.52■□□□□ 0.71
LSS-202ENST00000397728 RBM33Q96EV2 1170 aaKnown RBP19.51■□□□□ 0.71
LSS-202ENST00000397728 TEX14Q8IWB6 1497 aa19.51■□□□□ 0.71
LSS-202ENST00000397728 BECN1Q14457 450 aa19.5■□□□□ 0.71
LSS-202ENST00000397728 HDAC5Q9UQL6 1122 aa19.5■□□□□ 0.71
LSS-202ENST00000397728 GORABQ5T7V8 394 aa19.5■□□□□ 0.71
LSS-202ENST00000397728 RIPK4P57078 832 aa19.5■□□□□ 0.71
LSS-202ENST00000397728 RTEL1-TNFRSF6BF6WH68 1400 aa19.5■□□□□ 0.71
LSS-202ENST00000397728 BCL2L13Q9BXK5 485 aa19.5■□□□□ 0.71
LSS-202ENST00000397728 EIF5BO60841 1220 aaKnown RBP19.49■□□□□ 0.71
LSS-202ENST00000397728 NCOA1Q15788 1441 aa19.49■□□□□ 0.71
LSS-202ENST00000397728 WDR7Q9Y4E6 1490 aa19.49■□□□□ 0.71
LSS-202ENST00000397728 DHX29Q7Z478 1369 aaKnown RBP19.49■□□□□ 0.71
LSS-202ENST00000397728 NAP1L2Q9ULW6 460 aaPredicted RBP19.49■□□□□ 0.71
LSS-202ENST00000397728 PLCH2O75038 1416 aa19.48■□□□□ 0.71
LSS-202ENST00000397728 PTPN23Q9H3S7 1636 aa19.48■□□□□ 0.71
LSS-202ENST00000397728 MTHFSP49914 203 aa19.48■□□□□ 0.71
LSS-202ENST00000397728 WAPLQ7Z5K2 1190 aa19.48■□□□□ 0.71
LSS-202ENST00000397728 NECTIN2Q92692 538 aa19.48■□□□□ 0.71
LSS-202ENST00000397728 NUP153P49790 1475 aaKnown RBP19.48■□□□□ 0.71
LSS-202ENST00000397728 GPATCH8Q9UKJ3 1502 aaKnown RBP19.48■□□□□ 0.71
LSS-202ENST00000397728 PDE3BQ13370 1112 aa19.47■□□□□ 0.71
LSS-202ENST00000397728 PPP6R1Q9UPN7 881 aa19.47■□□□□ 0.71
LSS-202ENST00000397728 RAPGEF6Q8TEU7 1601 aa19.47■□□□□ 0.71
LSS-202ENST00000397728 ANP32BQ92688 251 aaKnown RBP19.47■□□□□ 0.71
LSS-202ENST00000397728 ZNF692Q9BU19 519 aaPredicted RBP19.47■□□□□ 0.71
LSS-202ENST00000397728 G3V3G9 751 aa19.46■□□□□ 0.71
LSS-202ENST00000397728 DCAF8Q5TAQ9 597 aa19.46■□□□□ 0.71
LSS-202ENST00000397728 PRDM11Q9NQV5 511 aa19.45■□□□□ 0.7
LSS-202ENST00000397728 AMOTL2Q9Y2J4 779 aa19.44■□□□□ 0.7
LSS-202ENST00000397728 ISY1Q9ULR0 285 aaKnown RBP19.44■□□□□ 0.7
LSS-202ENST00000397728 TCERG1O14776 1098 aaKnown RBP19.43■□□□□ 0.7
LSS-202ENST00000397728 RWDD1Q9H446 243 aaPredicted RBP19.43■□□□□ 0.7
LSS-202ENST00000397728 NUP160Q12769 1436 aa19.42■□□□□ 0.7
LSS-202ENST00000397728 MAP3K1Q13233 1512 aa19.42■□□□□ 0.7
LSS-202ENST00000397728 HMMRO75330 724 aa19.42■□□□□ 0.7
LSS-202ENST00000397728 CCDC61Q9Y6R9 512 aa19.42■□□□□ 0.7
LSS-202ENST00000397728 WASHC2AQ641Q2 1341 aa19.41■□□□□ 0.7
LSS-202ENST00000397728 TOM1L2Q6ZVM7 507 aa19.41■□□□□ 0.7
LSS-202ENST00000397728 NUDT16Q96DE0 195 aaKnown RBP19.41■□□□□ 0.7
LSS-202ENST00000397728 UGGT2Q9NYU1 1516 aa19.41■□□□□ 0.7
LSS-202ENST00000397728 DMRT2Q9Y5R5 561 aa19.41■□□□□ 0.7
LSS-202ENST00000397728 FRAT2O75474 233 aaPredicted RBP19.4■□□□□ 0.7
LSS-202ENST00000397728 E9PSI1 815 aa19.4■□□□□ 0.7
LSS-202ENST00000397728 RUNDC1Q96C34 613 aa19.4■□□□□ 0.7
LSS-202ENST00000397728 NEXNQ0ZGT2 675 aa19.4■□□□□ 0.7
LSS-202ENST00000397728 ZC3H6P61129 1189 aaKnown RBP19.39■□□□□ 0.7
LSS-202ENST00000397728 TSPYL4Q9UJ04 414 aa19.39■□□□□ 0.69
LSS-202ENST00000397728 KIAA0556O60303 1618 aa19.38■□□□□ 0.69
LSS-202ENST00000397728 ADGRF5Q8IZF2 1346 aa19.38■□□□□ 0.69
LSS-202ENST00000397728 TPRNQ4KMQ1 711 aa19.38■□□□□ 0.69
LSS-202ENST00000397728 DDRGK1Q96HY6 314 aa19.38■□□□□ 0.69
LSS-202ENST00000397728 TNRQ92752 1358 aa19.38■□□□□ 0.69
LSS-202ENST00000397728 FOXO3O43524 673 aa19.37■□□□□ 0.69
LSS-202ENST00000397728 ABCC2Q92887 1545 aa19.37■□□□□ 0.69
LSS-202ENST00000397728 NCLP19338 710 aaKnown RBP19.36■□□□□ 0.69
LSS-202ENST00000397728 ATAD2Q6PL18 1390 aa19.35■□□□□ 0.69
LSS-202ENST00000397728 ZNF518AQ6AHZ1 1483 aa19.35■□□□□ 0.69
LSS-202ENST00000397728 KIAA1211Q6ZU35 1233 aa19.35■□□□□ 0.69
LSS-202ENST00000397728 KLHL34Q8N239 644 aa19.35■□□□□ 0.69
LSS-202ENST00000397728 NBR1Q14596 966 aa19.34■□□□□ 0.69
LSS-202ENST00000397728 KDM5BQ9UGL1 1544 aa19.34■□□□□ 0.69
LSS-202ENST00000397728 TATP17735 454 aaPredicted RBP19.34■□□□□ 0.69
LSS-202ENST00000397728 TRAPPC8Q9Y2L5 1435 aa19.34■□□□□ 0.69
LSS-202ENST00000397728 PLEKHO1Q53GL0 409 aaPredicted RBP19.34■□□□□ 0.69
LSS-202ENST00000397728 DDX54Q8TDD1 881 aaKnown RBP19.34■□□□□ 0.69
LSS-202ENST00000397728 A2MP01023 1474 aa19.33■□□□□ 0.69
LSS-202ENST00000397728 PRKAR2BP31323 418 aa19.33■□□□□ 0.69
LSS-202ENST00000397728 C9orf78Q9NZ63 289 aaPredicted RBP19.33■□□□□ 0.69
LSS-202ENST00000397728 HSPA2P54652 639 aa19.33■□□□□ 0.68
LSS-202ENST00000397728 FKBP5Q13451 457 aaPredicted RBP19.33■□□□□ 0.68
LSS-202ENST00000397728 GNAI1P63096 354 aa19.32■□□□□ 0.68
LSS-202ENST00000397728 MCCP23508 829 aa19.32■□□□□ 0.68
LSS-202ENST00000397728 SULT6B1Q6IMI4 303 aa19.32■□□□□ 0.68
LSS-202ENST00000397728 GPATCH3Q96I76 525 aa19.32■□□□□ 0.68
LSS-202ENST00000397728 DDX58O95786 925 aaKnown RBP19.31■□□□□ 0.68
LSS-202ENST00000397728 PPP2R1AP30153 589 aa19.31■□□□□ 0.68
LSS-202ENST00000397728 RRS1Q15050 365 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms