RNA–Protein interactions for RNA: ENST00000397661.6

NFIX-203, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 3,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-203ENST00000397661 RRP7AQ9Y3A4 280 aaKnown RBP28.57■■■□□ 2.16
NFIX-203ENST00000397661 SCAPERQ9BY12 1400 aa28.56■■■□□ 2.16
NFIX-203ENST00000397661 DMRT2Q9Y5R5 561 aa28.55■■■□□ 2.16
NFIX-203ENST00000397661 CDCA8Q53HL2 280 aa28.54■■■□□ 2.16
NFIX-203ENST00000397661 ABCC2Q92887 1545 aa28.54■■■□□ 2.16
NFIX-203ENST00000397661 GGT6Q6P531 493 aa28.54■■■□□ 2.16
NFIX-203ENST00000397661 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.54■■■□□ 2.16
NFIX-203ENST00000397661 TMEM132EQ6IEE7 984 aa28.53■■■□□ 2.16
NFIX-203ENST00000397661 WDR7Q9Y4E6 1490 aa28.52■■■□□ 2.16
NFIX-203ENST00000397661 BLMP54132 1417 aaPredicted RBP28.52■■■□□ 2.16
NFIX-203ENST00000397661 UNC13BO14795 1591 aa28.52■■■□□ 2.16
NFIX-203ENST00000397661 MYO5CQ9NQX4 1742 aa28.52■■■□□ 2.16
NFIX-203ENST00000397661 SAFB2Q14151 953 aaKnown RBP eCLIP28.51■■■□□ 2.15
NFIX-203ENST00000397661 CARD14Q9BXL6 1004 aa28.51■■■□□ 2.15
NFIX-203ENST00000397661 IQGAP3Q86VI3 1631 aa28.48■■■□□ 2.15
NFIX-203ENST00000397661 MAST1Q9Y2H9 1570 aa28.47■■■□□ 2.15
NFIX-203ENST00000397661 CANXP27824 592 aaKnown RBP28.47■■■□□ 2.15
NFIX-203ENST00000397661 FRAT1Q92837 279 aaPredicted RBP28.47■■■□□ 2.15
NFIX-203ENST00000397661 UGGT1Q9NYU2 1555 aa28.46■■■□□ 2.15
NFIX-203ENST00000397661 KANK1Q14678 1352 aa28.45■■■□□ 2.15
NFIX-203ENST00000397661 SLC12A5Q9H2X9 1139 aa28.45■■■□□ 2.15
NFIX-203ENST00000397661 PRKCSHP14314 528 aaPredicted RBP28.45■■■□□ 2.14
NFIX-203ENST00000397661 ATP10AO60312 1499 aa28.45■■■□□ 2.14
NFIX-203ENST00000397661 SLFN5Q08AF3 891 aa28.44■■■□□ 2.14
NFIX-203ENST00000397661 BCL2L13Q9BXK5 485 aa28.43■■■□□ 2.14
NFIX-203ENST00000397661 MS4A1P11836 297 aa28.43■■■□□ 2.14
NFIX-203ENST00000397661 SCAF11Q99590 1463 aaKnown RBP28.42■■■□□ 2.14
NFIX-203ENST00000397661 DAXXQ9UER7 740 aaPredicted RBP28.42■■■□□ 2.14
NFIX-203ENST00000397661 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.41■■■□□ 2.14
NFIX-203ENST00000397661 ZMYM4Q5VZL5 1548 aa28.39■■■□□ 2.14
NFIX-203ENST00000397661 PANK1Q8TE04 598 aa28.39■■■□□ 2.14
NFIX-203ENST00000397661 EIF2AK4Q9P2K8 1649 aaKnown RBP28.39■■■□□ 2.14
NFIX-203ENST00000397661 PLXNC1O60486 1568 aa28.38■■■□□ 2.13
NFIX-203ENST00000397661 MORC1Q86VD1 984 aa28.38■■■□□ 2.13
NFIX-203ENST00000397661 COG6Q9Y2V7 657 aa28.38■■■□□ 2.13
NFIX-203ENST00000397661 ZCCHC11Q5TAX3 1644 aaKnown RBP28.37■■■□□ 2.13
NFIX-203ENST00000397661 EIF3AQ14152 1382 aaKnown RBP28.35■■■□□ 2.13
NFIX-203ENST00000397661 ABCC1P33527 1531 aa28.35■■■□□ 2.13
NFIX-203ENST00000397661 CENPQQ7L2Z9 268 aaPredicted RBP28.35■■■□□ 2.13
NFIX-203ENST00000397661 CFAP65Q6ZU64 1925 aaKnown RBP28.34■■■□□ 2.13
NFIX-203ENST00000397661 ZNF521Q96K83 1311 aa28.34■■■□□ 2.13
NFIX-203ENST00000397661 ARXQ96QS3 562 aa28.34■■■□□ 2.13
NFIX-203ENST00000397661 CLUAP1Q96AJ1 413 aa28.34■■■□□ 2.13
NFIX-203ENST00000397661 FANCAO15360 1455 aa28.32■■■□□ 2.12
NFIX-203ENST00000397661 BRPF3Q9ULD4 1205 aa28.32■■■□□ 2.12
NFIX-203ENST00000397661 KDM2BQ8NHM5 1336 aa28.32■■■□□ 2.12
NFIX-203ENST00000397661 ASXL1Q8IXJ9 1541 aa28.32■■■□□ 2.12
NFIX-203ENST00000397661 IGHDP01880 384 aa28.31■■■□□ 2.12
NFIX-203ENST00000397661 STK26Q9P289 416 aa28.31■■■□□ 2.12
NFIX-203ENST00000397661 CLTCL1P53675 1640 aa28.31■■■□□ 2.12
NFIX-203ENST00000397661 TNNQ9UQP3 1299 aa28.3■■■□□ 2.12
NFIX-203ENST00000397661 MADDQ8WXG6 1647 aa28.3■■■□□ 2.12
NFIX-203ENST00000397661 CENPJQ9HC77 1338 aaPredicted RBP28.28■■■□□ 2.12
NFIX-203ENST00000397661 PPM1GO15355 546 aaPredicted RBP28.28■■■□□ 2.12
NFIX-203ENST00000397661 E9PSI1 815 aa28.26■■■□□ 2.11
NFIX-203ENST00000397661 WWC1Q8IX03 1113 aa28.26■■■□□ 2.11
NFIX-203ENST00000397661 ADGRL1O94910 1474 aa28.26■■■□□ 2.11
NFIX-203ENST00000397661 MTHFSP49914 203 aa28.25■■■□□ 2.11
NFIX-203ENST00000397661 FAM161AQ3B820 660 aa28.25■■■□□ 2.11
NFIX-203ENST00000397661 NOS1P29475 1434 aa28.25■■■□□ 2.11
NFIX-203ENST00000397661 SHROOM2Q13796 1616 aa28.24■■■□□ 2.11
NFIX-203ENST00000397661 C8orf34Q49A92 452 aa28.24■■■□□ 2.11
NFIX-203ENST00000397661 ZFYVE16Q7Z3T8 1539 aa28.23■■■□□ 2.11
NFIX-203ENST00000397661 TCP11L2Q8N4U5 519 aa28.23■■■□□ 2.11
NFIX-203ENST00000397661 TRPM2O94759 1503 aa28.23■■■□□ 2.11
NFIX-203ENST00000397661 PTPRTO14522 1441 aa28.23■■■□□ 2.11
NFIX-203ENST00000397661 USP35Q9P2H5 1018 aa28.22■■■□□ 2.11
NFIX-203ENST00000397661 LAMC1P11047 1609 aa28.22■■■□□ 2.11
NFIX-203ENST00000397661 CABP2Q9NPB3 220 aa28.22■■■□□ 2.11
NFIX-203ENST00000397661 NFKBIBQ15653 356 aa28.21■■■□□ 2.11
NFIX-203ENST00000397661 DDRGK1Q96HY6 314 aa28.21■■■□□ 2.11
NFIX-203ENST00000397661 NSD3Q9BZ95 1437 aa28.21■■■□□ 2.11
NFIX-203ENST00000397661 NPM1P06748 294 aaKnown RBP eCLIP28.21■■■□□ 2.11
NFIX-203ENST00000397661 ERVK-7P63135 1459 aa28.2■■■□□ 2.1
NFIX-203ENST00000397661 RAPGEF3O95398 923 aa28.19■■■□□ 2.1
NFIX-203ENST00000397661 U2AF1L5P0DN76 240 aaPredicted RBP28.19■■■□□ 2.1
NFIX-203ENST00000397661 U2AF1Q01081 240 aaKnown RBP eCLIP28.19■■■□□ 2.1
NFIX-203ENST00000397661 PIK3C2GO75747 1445 aa28.18■■■□□ 2.1
NFIX-203ENST00000397661 RNF17Q9BXT8 1623 aaKnown RBP28.18■■■□□ 2.1
NFIX-203ENST00000397661 ATP7AQ04656 1500 aa28.18■■■□□ 2.1
NFIX-203ENST00000397661 NKTRP30414 1462 aaKnown RBP28.17■■■□□ 2.1
NFIX-203ENST00000397661 TRMT2AQ8IZ69 625 aaKnown RBP28.17■■■□□ 2.1
NFIX-203ENST00000397661 RTEL1-TNFRSF6BF6WH68 1400 aa28.17■■■□□ 2.1
NFIX-203ENST00000397661 U2SURPO15042 1029 aaKnown RBP28.16■■■□□ 2.1
NFIX-203ENST00000397661 GSE1Q14687 1217 aa28.16■■■□□ 2.1
NFIX-203ENST00000397661 STAC3Q96MF2 364 aa28.16■■■□□ 2.1
NFIX-203ENST00000397661 SPHKAPQ2M3C7 1700 aa28.15■■■□□ 2.1
NFIX-203ENST00000397661 IQGAP1P46940 1657 aa28.14■■■□□ 2.1
NFIX-203ENST00000397661 SEC24BO95487 1268 aa28.14■■■□□ 2.1
NFIX-203ENST00000397661 EIF5BO60841 1220 aaKnown RBP28.14■■■□□ 2.09
NFIX-203ENST00000397661 INSRP06213 1382 aa28.13■■■□□ 2.09
NFIX-203ENST00000397661 RLBP1P12271 317 aa28.13■■■□□ 2.09
NFIX-203ENST00000397661 SYNMO15061 1565 aa28.12■■■□□ 2.09
NFIX-203ENST00000397661 TSR2Q969E8 191 aaKnown RBP28.11■■■□□ 2.09
NFIX-203ENST00000397661 GGNBP2Q9H3C7 697 aa28.1■■■□□ 2.09
NFIX-203ENST00000397661 SRPK2P78362 688 aaKnown RBP28.1■■■□□ 2.09
NFIX-203ENST00000397661 ASXL2Q76L83 1435 aa28.1■■■□□ 2.09
NFIX-203ENST00000397661 RUNDC1Q96C34 613 aa28.09■■■□□ 2.09
NFIX-203ENST00000397661 RARSP54136 660 aaKnown RBP28.06■■■□□ 2.08
NFIX-203ENST00000397661 C14orf93Q9H972 538 aaKnown RBP28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms