RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 VSIG10Q8N0Z9 540 aa7.05□□□□□ -1.28
PTPRD-205ENST00000397611 TNNT2P45379 298 aaPredicted RBP7.05□□□□□ -1.28
PTPRD-205ENST00000397611 PREX2Q70Z35 1606 aa7.04□□□□□ -1.28
PTPRD-205ENST00000397611 GOLGA2Q08379 1002 aa7.04□□□□□ -1.28
PTPRD-205ENST00000397611 CT47B1P0C2W7 299 aaPredicted RBP7.04□□□□□ -1.28
PTPRD-205ENST00000397611 IQGAP3Q86VI3 1631 aa7.04□□□□□ -1.28
PTPRD-205ENST00000397611 RPGRIP1LQ68CZ1 1315 aa7.04□□□□□ -1.28
PTPRD-205ENST00000397611 PDE4AP27815 886 aa7.04□□□□□ -1.28
PTPRD-205ENST00000397611 MYOM2P54296 1465 aa7.04□□□□□ -1.28
PTPRD-205ENST00000397611 POLR3AO14802 1390 aaPredicted RBP7.04□□□□□ -1.28
PTPRD-205ENST00000397611 SPAG9O60271 1321 aaKnown RBP7.04□□□□□ -1.28
PTPRD-205ENST00000397611 MAPK8IP3Q9UPT6 1336 aa7.03□□□□□ -1.28
PTPRD-205ENST00000397611 TRMT2AQ8IZ69 625 aaKnown RBP7.03□□□□□ -1.28
PTPRD-205ENST00000397611 RGS3P49796 1198 aa7.03□□□□□ -1.28
PTPRD-205ENST00000397611 HNRNPMP52272 730 aaKnown RBP eCLIP7.03□□□□□ -1.28
PTPRD-205ENST00000397611 E9PSI1 815 aa7.03□□□□□ -1.28
PTPRD-205ENST00000397611 ARID3AQ99856 593 aa7.03□□□□□ -1.28
PTPRD-205ENST00000397611 TRPM2O94759 1503 aa7.02□□□□□ -1.29
PTPRD-205ENST00000397611 PHF23Q9BUL5 403 aaPredicted RBP7.02□□□□□ -1.29
PTPRD-205ENST00000397611 NSD2O96028 1365 aa7.02□□□□□ -1.29
PTPRD-205ENST00000397611 NCLP19338 710 aaKnown RBP7.02□□□□□ -1.29
PTPRD-205ENST00000397611 FBLN2P98095 1184 aa7.02□□□□□ -1.29
PTPRD-205ENST00000397611 WDR43Q15061 677 aaKnown RBP eCLIP7.02□□□□□ -1.29
PTPRD-205ENST00000397611 SHROOM2Q13796 1616 aa7.02□□□□□ -1.29
PTPRD-205ENST00000397611 BCORL1Q5H9F3 1711 aa7.02□□□□□ -1.29
PTPRD-205ENST00000397611 L1TD1Q5T7N2 865 aaKnown RBP7.01□□□□□ -1.29
PTPRD-205ENST00000397611 PANK3Q9H999 370 aa7.01□□□□□ -1.29
PTPRD-205ENST00000397611 SAMD9LQ8IVG5 1584 aa7.01□□□□□ -1.29
PTPRD-205ENST00000397611 VWDEQ8N2E2 1590 aa7.01□□□□□ -1.29
PTPRD-205ENST00000397611 CCDC27Q2M243 656 aa7.01□□□□□ -1.29
PTPRD-205ENST00000397611 FANCAO15360 1455 aa7.01□□□□□ -1.29
PTPRD-205ENST00000397611 LMTK2Q8IWU2 1503 aa7.01□□□□□ -1.29
PTPRD-205ENST00000397611 CDC42BPAQ5VT25 1732 aa7.01□□□□□ -1.29
PTPRD-205ENST00000397611 RSPH6AQ9H0K4 717 aa7.01□□□□□ -1.29
PTPRD-205ENST00000397611 E9PCH4 1651 aa7.01□□□□□ -1.29
PTPRD-205ENST00000397611 ARHGAP5Q13017 1502 aa7.01□□□□□ -1.29
PTPRD-205ENST00000397611 PPP2R1AP30153 589 aa7□□□□□ -1.29
PTPRD-205ENST00000397611 SYCP2Q9BX26 1530 aa7□□□□□ -1.29
PTPRD-205ENST00000397611 NBPF1Q3BBV0 1214 aa7□□□□□ -1.29
PTPRD-205ENST00000397611 ZNF428Q96B54 188 aa7□□□□□ -1.29
PTPRD-205ENST00000397611 PNNQ9H307 717 aaKnown RBP7□□□□□ -1.29
PTPRD-205ENST00000397611 KDM2AQ9Y2K7 1162 aa7□□□□□ -1.29
PTPRD-205ENST00000397611 KDM2BQ8NHM5 1336 aa7□□□□□ -1.29
PTPRD-205ENST00000397611 ADGRL1O94910 1474 aa7□□□□□ -1.29
PTPRD-205ENST00000397611 ABCC1P33527 1531 aa7□□□□□ -1.29
PTPRD-205ENST00000397611 DUSP27Q5VZP5 1158 aa7□□□□□ -1.29
PTPRD-205ENST00000397611 ASXL1Q8IXJ9 1541 aa6.99□□□□□ -1.29
PTPRD-205ENST00000397611 FAM161AQ3B820 660 aa6.99□□□□□ -1.29
PTPRD-205ENST00000397611 EXOC6Q8TAG9 804 aa6.99□□□□□ -1.29
PTPRD-205ENST00000397611 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.99□□□□□ -1.29
PTPRD-205ENST00000397611 IL27Q8NEV9 243 aa6.99□□□□□ -1.29
PTPRD-205ENST00000397611 SYNMO15061 1565 aa6.99□□□□□ -1.29
PTPRD-205ENST00000397611 SLFN5Q08AF3 891 aa6.99□□□□□ -1.29
PTPRD-205ENST00000397611 DNTTIP2Q5QJE6 756 aaKnown RBP6.99□□□□□ -1.29
PTPRD-205ENST00000397611 PKNOX2Q96KN3 472 aa6.99□□□□□ -1.29
PTPRD-205ENST00000397611 TRPM1Q7Z4N2 1603 aa6.99□□□□□ -1.29
PTPRD-205ENST00000397611 PTMAP06454 111 aaKnown RBP6.99□□□□□ -1.29
PTPRD-205ENST00000397611 NPM1P06748 294 aaKnown RBP eCLIP6.99□□□□□ -1.29
PTPRD-205ENST00000397611 SPRYD3Q8NCJ5 442 aa6.99□□□□□ -1.29
PTPRD-205ENST00000397611 CDK11BP21127 795 aaKnown RBP6.98□□□□□ -1.29
PTPRD-205ENST00000397611 TTC37Q6PGP7 1564 aa6.98□□□□□ -1.29
PTPRD-205ENST00000397611 ISY1Q9ULR0 285 aaKnown RBP6.98□□□□□ -1.29
PTPRD-205ENST00000397611 DISP3Q9P2K9 1392 aa6.98□□□□□ -1.29
PTPRD-205ENST00000397611 HSP90AA2PQ14568 343 aaPredicted RBP6.98□□□□□ -1.29
PTPRD-205ENST00000397611 NRXN1Q9ULB1 1477 aa6.98□□□□□ -1.29
PTPRD-205ENST00000397611 RNF17Q9BXT8 1623 aaKnown RBP6.97□□□□□ -1.29
PTPRD-205ENST00000397611 ZFYVE9O95405 1425 aa6.97□□□□□ -1.29
PTPRD-205ENST00000397611 GOLGA6L22H0YM25 854 aa6.97□□□□□ -1.29
PTPRD-205ENST00000397611 WDR63Q8IWG1 891 aa6.97□□□□□ -1.29
PTPRD-205ENST00000397611 GZF1Q9H116 711 aaPredicted RBP6.96□□□□□ -1.29
PTPRD-205ENST00000397611 CHMP4BQ9H444 224 aaKnown RBP6.96□□□□□ -1.29
PTPRD-205ENST00000397611 ABCC11Q96J66 1382 aa6.96□□□□□ -1.29
PTPRD-205ENST00000397611 NKTRP30414 1462 aaKnown RBP6.96□□□□□ -1.29
PTPRD-205ENST00000397611 ZBTB7CA1YPR0 619 aa6.96□□□□□ -1.29
PTPRD-205ENST00000397611 ADAMTS8Q9UP79 889 aa6.96□□□□□ -1.29
PTPRD-205ENST00000397611 ARHGAP31Q2M1Z3 1444 aa6.96□□□□□ -1.3
PTPRD-205ENST00000397611 GSE1Q14687 1217 aa6.96□□□□□ -1.3
PTPRD-205ENST00000397611 CFAP53Q96M91 514 aa6.96□□□□□ -1.3
PTPRD-205ENST00000397611 KIAA1210Q9ULL0 1709 aa6.96□□□□□ -1.3
PTPRD-205ENST00000397611 RGL3Q3MIN7 710 aa6.96□□□□□ -1.3
PTPRD-205ENST00000397611 CENPJQ9HC77 1338 aaPredicted RBP6.96□□□□□ -1.3
PTPRD-205ENST00000397611 MLH3Q9UHC1 1453 aa6.95□□□□□ -1.3
PTPRD-205ENST00000397611 TRAPPC8Q9Y2L5 1435 aa6.95□□□□□ -1.3
PTPRD-205ENST00000397611 SLC4A3P48751 1232 aa6.95□□□□□ -1.3
PTPRD-205ENST00000397611 PAK3O75914 559 aaPredicted RBP6.95□□□□□ -1.3
PTPRD-205ENST00000397611 TPRNQ4KMQ1 711 aa6.95□□□□□ -1.3
PTPRD-205ENST00000397611 PLEKHH1Q9ULM0 1364 aa6.95□□□□□ -1.3
PTPRD-205ENST00000397611 SLKQ9H2G2 1235 aaPredicted RBP6.94□□□□□ -1.3
PTPRD-205ENST00000397611 MSNP26038 577 aaKnown RBP6.94□□□□□ -1.3
PTPRD-205ENST00000397611 IL16Q14005 1332 aa6.94□□□□□ -1.3
PTPRD-205ENST00000397611 ZFYVE16Q7Z3T8 1539 aa6.94□□□□□ -1.3
PTPRD-205ENST00000397611 SLC52A1Q9NWF4 448 aa6.94□□□□□ -1.3
PTPRD-205ENST00000397611 PMFBP1Q8TBY8 1022 aa6.93□□□□□ -1.3
PTPRD-205ENST00000397611 C14orf93Q9H972 538 aaKnown RBP6.93□□□□□ -1.3
PTPRD-205ENST00000397611 GOLGA6L3A6NEY3 463 aa6.93□□□□□ -1.3
PTPRD-205ENST00000397611 TET3O43151 1660 aa6.93□□□□□ -1.3
PTPRD-205ENST00000397611 HAP1P54257 671 aaPredicted RBP6.93□□□□□ -1.3
PTPRD-205ENST00000397611 CDCA7LQ96GN5 454 aa6.93□□□□□ -1.3
PTPRD-205ENST00000397611 CFAP44Q96MT7 982 aa6.93□□□□□ -1.3
PTPRD-205ENST00000397611 MADDQ8WXG6 1647 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms