RNA–Protein interactions for RNA: ENST00000397238.6

AGAP3-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-202ENST00000397238 AMER1Q5JTC6 1135 aaPredicted RBP25.54■■□□□ 1.68
AGAP3-202ENST00000397238 PLEKHH2Q8IVE3 1493 aa25.53■■□□□ 1.68
AGAP3-202ENST00000397238 TRPM1Q7Z4N2 1603 aa25.52■■□□□ 1.68
AGAP3-202ENST00000397238 ZNF521Q96K83 1311 aa25.52■■□□□ 1.68
AGAP3-202ENST00000397238 CCDC141Q6ZP82 1450 aa25.52■■□□□ 1.68
AGAP3-202ENST00000397238 MAGI2Q86UL8 1455 aa25.51■■□□□ 1.68
AGAP3-202ENST00000397238 TNNT2P45379 298 aaPredicted RBP25.51■■□□□ 1.67
AGAP3-202ENST00000397238 AFAP1Q8N556 730 aa25.51■■□□□ 1.67
AGAP3-202ENST00000397238 PLA2R1Q13018 1463 aa25.5■■□□□ 1.67
AGAP3-202ENST00000397238 SYCP2Q9BX26 1530 aa25.5■■□□□ 1.67
AGAP3-202ENST00000397238 RSPH4AQ5TD94 716 aa25.5■■□□□ 1.67
AGAP3-202ENST00000397238 GPRASP1Q5JY77 1395 aa25.5■■□□□ 1.67
AGAP3-202ENST00000397238 BECN1Q14457 450 aa25.49■■□□□ 1.67
AGAP3-202ENST00000397238 EFCAB2Q5VUJ9 269 aa25.49■■□□□ 1.67
AGAP3-202ENST00000397238 BCL2L13Q9BXK5 485 aa25.49■■□□□ 1.67
AGAP3-202ENST00000397238 RRP7AQ9Y3A4 280 aaKnown RBP25.49■■□□□ 1.67
AGAP3-202ENST00000397238 GZF1Q9H116 711 aaPredicted RBP25.49■■□□□ 1.67
AGAP3-202ENST00000397238 USP19O94966 1318 aa25.49■■□□□ 1.67
AGAP3-202ENST00000397238 SHANK2Q9UPX8 1470 aa25.47■■□□□ 1.67
AGAP3-202ENST00000397238 SAMD9LQ8IVG5 1584 aa25.47■■□□□ 1.67
AGAP3-202ENST00000397238 CLUAP1Q96AJ1 413 aa25.46■■□□□ 1.67
AGAP3-202ENST00000397238 FAM43AQ8N2R8 423 aa25.45■■□□□ 1.66
AGAP3-202ENST00000397238 E9PSI1 815 aa25.44■■□□□ 1.66
AGAP3-202ENST00000397238 CENPJQ9HC77 1338 aaPredicted RBP25.44■■□□□ 1.66
AGAP3-202ENST00000397238 TNNQ9UQP3 1299 aa25.43■■□□□ 1.66
AGAP3-202ENST00000397238 INSRP06213 1382 aa25.43■■□□□ 1.66
AGAP3-202ENST00000397238 TTC37Q6PGP7 1564 aa25.43■■□□□ 1.66
AGAP3-202ENST00000397238 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.41■■□□□ 1.666e-7■■■■□ 19.5
AGAP3-202ENST00000397238 NKTRP30414 1462 aaKnown RBP25.41■■□□□ 1.66
AGAP3-202ENST00000397238 UPF2Q9HAU5 1272 aaKnown RBP25.41■■□□□ 1.66
AGAP3-202ENST00000397238 CDC42BPBQ9Y5S2 1711 aa25.4■■□□□ 1.66
AGAP3-202ENST00000397238 PRDM15P57071 1507 aaPredicted RBP25.4■■□□□ 1.66
AGAP3-202ENST00000397238 WDR7Q9Y4E6 1490 aa25.39■■□□□ 1.66
AGAP3-202ENST00000397238 CDCA8Q53HL2 280 aa25.39■■□□□ 1.66
AGAP3-202ENST00000397238 TRMT2AQ8IZ69 625 aaKnown RBP25.39■■□□□ 1.65
AGAP3-202ENST00000397238 RRAGDQ9NQL2 400 aaPredicted RBP25.39■■□□□ 1.65
AGAP3-202ENST00000397238 CGNL1Q0VF96 1302 aa25.38■■□□□ 1.65
AGAP3-202ENST00000397238 RSPH6AQ9H0K4 717 aa25.38■■□□□ 1.65
AGAP3-202ENST00000397238 EIF3AQ14152 1382 aaKnown RBP25.38■■□□□ 1.65
AGAP3-202ENST00000397238 UBE2Q2Q8WVN8 375 aa25.37■■□□□ 1.65
AGAP3-202ENST00000397238 SPAG9O60271 1321 aaKnown RBP25.37■■□□□ 1.65
AGAP3-202ENST00000397238 ABCC2Q92887 1545 aa25.36■■□□□ 1.65
AGAP3-202ENST00000397238 MAPK8IP3Q9UPT6 1336 aa25.35■■□□□ 1.65
AGAP3-202ENST00000397238 PCDHB15Q9Y5E8 787 aa25.34■■□□□ 1.65
AGAP3-202ENST00000397238 WWC1Q8IX03 1113 aa25.33■■□□□ 1.65
AGAP3-202ENST00000397238 TBC1D2Q9BYX2 928 aa25.33■■□□□ 1.65
AGAP3-202ENST00000397238 PDZRN3Q9UPQ7 1066 aa25.33■■□□□ 1.64
AGAP3-202ENST00000397238 PREX2Q70Z35 1606 aa25.32■■□□□ 1.64
AGAP3-202ENST00000397238 TRAPPC8Q9Y2L5 1435 aa25.32■■□□□ 1.64
AGAP3-202ENST00000397238 PDE3AQ14432 1141 aa25.32■■□□□ 1.64
AGAP3-202ENST00000397238 RLBP1P12271 317 aa25.32■■□□□ 1.64
AGAP3-202ENST00000397238 ARHGEF5Q12774 1597 aa25.32■■□□□ 1.64
AGAP3-202ENST00000397238 L1TD1Q5T7N2 865 aaKnown RBP25.29■■□□□ 1.64
AGAP3-202ENST00000397238 PANK2Q9BZ23 570 aa25.29■■□□□ 1.64
AGAP3-202ENST00000397238 CARD14Q9BXL6 1004 aa25.28■■□□□ 1.64
AGAP3-202ENST00000397238 KIF3BO15066 747 aa25.27■■□□□ 1.64
AGAP3-202ENST00000397238 MFAP1P55081 439 aaKnown RBP25.27■■□□□ 1.64
AGAP3-202ENST00000397238 NAP1L5Q96NT1 182 aaPredicted RBP25.27■■□□□ 1.64
AGAP3-202ENST00000397238 PLCH2O75038 1416 aa25.27■■□□□ 1.64
AGAP3-202ENST00000397238 CFAP70Q5T0N1 1121 aa25.27■■□□□ 1.64
AGAP3-202ENST00000397238 ASXL1Q8IXJ9 1541 aa25.26■■□□□ 1.63
AGAP3-202ENST00000397238 GOLGA6L3A6NEY3 463 aa25.26■■□□□ 1.63
AGAP3-202ENST00000397238 ANTXR1Q9H6X2 564 aa25.25■■□□□ 1.63
AGAP3-202ENST00000397238 PMFBP1Q8TBY8 1022 aa25.25■■□□□ 1.63
AGAP3-202ENST00000397238 XRCC6P12956 609 aaKnown RBP eCLIP25.25■■□□□ 1.636e-6■■■■■ 31.4
AGAP3-202ENST00000397238 RARSP54136 660 aaKnown RBP25.24■■□□□ 1.63
AGAP3-202ENST00000397238 TBC1D32Q96NH3 1257 aa25.24■■□□□ 1.63
AGAP3-202ENST00000397238 PIK3C2GO75747 1445 aa25.23■■□□□ 1.63
AGAP3-202ENST00000397238 SHROOM2Q13796 1616 aa25.23■■□□□ 1.63
AGAP3-202ENST00000397238 TCP11L2Q8N4U5 519 aa25.22■■□□□ 1.63
AGAP3-202ENST00000397238 MORC1Q86VD1 984 aa25.22■■□□□ 1.63
AGAP3-202ENST00000397238 MYO5CQ9NQX4 1742 aa25.21■■□□□ 1.63
AGAP3-202ENST00000397238 EIF2AK4Q9P2K8 1649 aaKnown RBP25.2■■□□□ 1.62
AGAP3-202ENST00000397238 RWDD1Q9H446 243 aaPredicted RBP25.19■■□□□ 1.62
AGAP3-202ENST00000397238 MCM4P33991 863 aa25.19■■□□□ 1.62
AGAP3-202ENST00000397238 CHGAP10645 457 aaKnown RBP25.18■■□□□ 1.62
AGAP3-202ENST00000397238 ZCCHC11Q5TAX3 1644 aaKnown RBP25.18■■□□□ 1.62
AGAP3-202ENST00000397238 NPM1P06748 294 aaKnown RBP eCLIP25.18■■□□□ 1.62
AGAP3-202ENST00000397238 FTSJ3Q8IY81 847 aaKnown RBP25.18■■□□□ 1.62
AGAP3-202ENST00000397238 SENP3Q9H4L4 574 aaPredicted RBP25.18■■□□□ 1.62
AGAP3-202ENST00000397238 SCAPERQ9BY12 1400 aa25.16■■□□□ 1.62
AGAP3-202ENST00000397238 SCAF11Q99590 1463 aaKnown RBP25.16■■□□□ 1.62
AGAP3-202ENST00000397238 PNNQ9H307 717 aaKnown RBP25.16■■□□□ 1.62
AGAP3-202ENST00000397238 C22orf23Q9BZE7 217 aa25.15■■□□□ 1.62
AGAP3-202ENST00000397238 TRAK2O60296 914 aa25.14■■□□□ 1.62
AGAP3-202ENST00000397238 SLC12A5Q9H2X9 1139 aa25.13■■□□□ 1.61
AGAP3-202ENST00000397238 RUNDC1Q96C34 613 aa25.13■■□□□ 1.61
AGAP3-202ENST00000397238 LAMC1P11047 1609 aa25.13■■□□□ 1.61
AGAP3-202ENST00000397238 NLRP1Q9C000 1473 aa25.11■■□□□ 1.61
AGAP3-202ENST00000397238 TSR2Q969E8 191 aaKnown RBP25.11■■□□□ 1.61
AGAP3-202ENST00000397238 TRAK1Q9UPV9 953 aa25.11■■□□□ 1.61
AGAP3-202ENST00000397238 DUOX2Q9NRD8 1548 aa25.11■■□□□ 1.61
AGAP3-202ENST00000397238 MTHFSP49914 203 aa25.1■■□□□ 1.61
AGAP3-202ENST00000397238 CLASP1Q7Z460 1538 aa25.1■■□□□ 1.61
AGAP3-202ENST00000397238 ADGRF5Q8IZF2 1346 aa25.1■■□□□ 1.61
AGAP3-202ENST00000397238 FOXD4L1Q9NU39 408 aa25.1■■□□□ 1.61
AGAP3-202ENST00000397238 U2AF1L5P0DN76 240 aaPredicted RBP25.09■■□□□ 1.61
AGAP3-202ENST00000397238 U2AF1Q01081 240 aaKnown RBP eCLIP25.09■■□□□ 1.61
AGAP3-202ENST00000397238 GGT6Q6P531 493 aa25.08■■□□□ 1.61
AGAP3-202ENST00000397238 CHMP5Q9NZZ3 219 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms